RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
CDH13-213ENST00000569454 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
CDH13-213ENST00000569454 CAPN15O75808 1086 aa8.9□□□□□ -0.98
CDH13-213ENST00000569454 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
CDH13-213ENST00000569454 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
CDH13-213ENST00000569454 U3KPZ7 1027 aaPredicted RBP8.89□□□□□ -0.99
CDH13-213ENST00000569454 CLIP1P30622 1438 aa8.88□□□□□ -0.99
CDH13-213ENST00000569454 SPATA31D1Q6ZQQ2 1576 aa8.87□□□□□ -0.99
CDH13-213ENST00000569454 SLC24A1O60721 1099 aa8.87□□□□□ -0.99
CDH13-213ENST00000569454 SPINK5Q9NQ38 1064 aaPredicted RBP8.87□□□□□ -0.99
CDH13-213ENST00000569454 LAMC3Q9Y6N6 1575 aa8.86□□□□□ -0.99
CDH13-213ENST00000569454 RAPGEF2Q9Y4G8 1499 aa8.86□□□□□ -0.99
CDH13-213ENST00000569454 EHMT2Q96KQ7 1210 aa8.86□□□□□ -0.99
CDH13-213ENST00000569454 VPS8Q8N3P4 1428 aa8.86□□□□□ -0.99
CDH13-213ENST00000569454 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
CDH13-213ENST00000569454 DNMBPQ6XZF7 1577 aa8.84□□□□□ -0.99
CDH13-213ENST00000569454 HECW2Q9P2P5 1572 aa8.82□□□□□ -1
CDH13-213ENST00000569454 IFFO2Q5TF58 517 aa8.81□□□□□ -1
CDH13-213ENST00000569454 FGD5Q6ZNL6 1462 aa8.81□□□□□ -1
CDH13-213ENST00000569454 ARHGEF11O15085 1522 aa8.79□□□□□ -1
CDH13-213ENST00000569454 ABCA10Q8WWZ4 1543 aa8.78□□□□□ -1
CDH13-213ENST00000569454 PDS5BQ9NTI5 1447 aa8.78□□□□□ -1
CDH13-213ENST00000569454 TOPBP1Q92547 1522 aa8.77□□□□□ -1.01
CDH13-213ENST00000569454 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
CDH13-213ENST00000569454 CUL7Q14999 1698 aa8.76□□□□□ -1.01
CDH13-213ENST00000569454 APLP2Q06481 763 aa8.76□□□□□ -1.01
CDH13-213ENST00000569454 SYNJ2O15056 1496 aa8.74□□□□□ -1.01
CDH13-213ENST00000569454 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
CDH13-213ENST00000569454 IGF1RP08069 1367 aa8.73□□□□□ -1.01
CDH13-213ENST00000569454 ARAP1Q96P48 1450 aa8.73□□□□□ -1.01
CDH13-213ENST00000569454 CARMIL1Q5VZK9 1371 aa8.73□□□□□ -1.01
CDH13-213ENST00000569454 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
CDH13-213ENST00000569454 MAP3K1Q13233 1512 aa8.71□□□□□ -1.01
CDH13-213ENST00000569454 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
CDH13-213ENST00000569454 NESP48681 1621 aa8.7□□□□□ -1.02
CDH13-213ENST00000569454 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
CDH13-213ENST00000569454 FHAD1B1AJZ9 1412 aa8.69□□□□□ -1.02
CDH13-213ENST00000569454 URB2Q14146 1524 aaKnown RBP8.69□□□□□ -1.02
CDH13-213ENST00000569454 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
CDH13-213ENST00000569454 ZNF219Q9P2Y4 722 aaPredicted RBP8.68□□□□□ -1.02
CDH13-213ENST00000569454 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
CDH13-213ENST00000569454 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
CDH13-213ENST00000569454 CCER1Q8TC90 406 aaPredicted RBP8.65□□□□□ -1.02
CDH13-213ENST00000569454 CTTNBP2Q8WZ74 1663 aa8.65□□□□□ -1.03
CDH13-213ENST00000569454 AQRO60306 1485 aaKnown RBP eCLIP8.64□□□□□ -1.03
CDH13-213ENST00000569454 RAD54L2Q9Y4B4 1467 aa8.64□□□□□ -1.03
CDH13-213ENST00000569454 KIF21AQ7Z4S6 1674 aa8.64□□□□□ -1.03
CDH13-213ENST00000569454 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
CDH13-213ENST00000569454 TIAM1Q13009 1591 aa8.63□□□□□ -1.03
CDH13-213ENST00000569454 GAPVD1Q14C86 1478 aa8.63□□□□□ -1.03
CDH13-213ENST00000569454 FYCO1Q9BQS8 1478 aa8.63□□□□□ -1.03
CDH13-213ENST00000569454 RRBP1Q9P2E9 1410 aaKnown RBP8.63□□□□□ -1.03
CDH13-213ENST00000569454 CFAP43Q8NDM7 1665 aa8.62□□□□□ -1.03
CDH13-213ENST00000569454 TARBP1Q13395 1621 aaKnown RBP8.62□□□□□ -1.03
CDH13-213ENST00000569454 CHRDL2Q6WN34 429 aa8.61□□□□□ -1.03
CDH13-213ENST00000569454 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
CDH13-213ENST00000569454 ABCB7O75027 752 aa8.6□□□□□ -1.03
CDH13-213ENST00000569454 FMN1Q68DA7 1419 aa8.6□□□□□ -1.03
CDH13-213ENST00000569454 CLSPNQ9HAW4 1339 aa8.59□□□□□ -1.03
CDH13-213ENST00000569454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.59□□□□□ -1.03
CDH13-213ENST00000569454 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.03
CDH13-213ENST00000569454 WDR62O43379 1518 aa8.59□□□□□ -1.03
CDH13-213ENST00000569454 IFT140Q96RY7 1462 aa8.58□□□□□ -1.04
CDH13-213ENST00000569454 TTBK1Q5TCY1 1321 aaPredicted RBP8.58□□□□□ -1.04
CDH13-213ENST00000569454 PCF11O94913 1555 aaKnown RBP8.58□□□□□ -1.04
CDH13-213ENST00000569454 SAMD9Q5K651 1589 aa8.58□□□□□ -1.04
CDH13-213ENST00000569454 CASKIN1Q8WXD9 1431 aa8.58□□□□□ -1.04
CDH13-213ENST00000569454 RANGAP1P46060 587 aaPredicted RBP8.57□□□□□ -1.04
CDH13-213ENST00000569454 SP7Q8TDD2 431 aaPredicted RBP8.57□□□□□ -1.04
CDH13-213ENST00000569454 LRRC9Q6ZRR7 1453 aa8.57□□□□□ -1.04
CDH13-213ENST00000569454 PBRM1Q86U86 1689 aa8.56□□□□□ -1.04
CDH13-213ENST00000569454 CCNB3Q8WWL7 1395 aa8.56□□□□□ -1.04
CDH13-213ENST00000569454 GRIN2BQ13224 1484 aa8.56□□□□□ -1.04
CDH13-213ENST00000569454 ADAMTS12P58397 1594 aa8.56□□□□□ -1.04
CDH13-213ENST00000569454 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
CDH13-213ENST00000569454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDH13-213ENST00000569454 FHOD3Q2V2M9 1422 aa8.53□□□□□ -1.04
CDH13-213ENST00000569454 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.05
CDH13-213ENST00000569454 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
CDH13-213ENST00000569454 IQGAP2Q13576 1575 aa8.52□□□□□ -1.05
CDH13-213ENST00000569454 CCDC18Q5T9S5 1454 aa8.51□□□□□ -1.05
CDH13-213ENST00000569454 SLC4A2P04920 1241 aa8.5□□□□□ -1.05
CDH13-213ENST00000569454 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
CDH13-213ENST00000569454 HECW1Q76N89 1606 aa8.49□□□□□ -1.05
CDH13-213ENST00000569454 UGGT2Q9NYU1 1516 aa8.49□□□□□ -1.05
CDH13-213ENST00000569454 SAMD1Q6SPF0 538 aaPredicted RBP8.48□□□□□ -1.05
CDH13-213ENST00000569454 MAGI1Q96QZ7 1491 aaPredicted RBP8.48□□□□□ -1.05
CDH13-213ENST00000569454 SRCAPQ6ZRS2 3230 aa8.47□□□□□ -1.05
CDH13-213ENST00000569454 EIF4G3O43432 1585 aaKnown RBP8.47□□□□□ -1.05
CDH13-213ENST00000569454 KIAA0586Q9BVV6 1533 aa8.46□□□□□ -1.05
CDH13-213ENST00000569454 MTUS2Q5JR59 1369 aa8.46□□□□□ -1.06
CDH13-213ENST00000569454 DHX57Q6P158 1386 aaKnown RBP8.46□□□□□ -1.06
CDH13-213ENST00000569454 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
CDH13-213ENST00000569454 SUPT6HQ7KZ85 1726 aaKnown RBP8.45□□□□□ -1.06
CDH13-213ENST00000569454 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
CDH13-213ENST00000569454 FGD6Q6ZV73 1430 aa8.44□□□□□ -1.06
CDH13-213ENST00000569454 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
CDH13-213ENST00000569454 MYOM3Q5VTT5 1437 aa8.42□□□□□ -1.06
CDH13-213ENST00000569454 SETD5Q9C0A6 1442 aa8.42□□□□□ -1.06
CDH13-213ENST00000569454 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms