RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
CDH13-213ENST00000569454 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
CDH13-213ENST00000569454 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
CDH13-213ENST00000569454 PHF23Q9BUL5 403 aaPredicted RBP12.7□□□□□ -0.38
CDH13-213ENST00000569454 NISCHQ9Y2I1 1504 aa12.42□□□□□ -0.42
CDH13-213ENST00000569454 FOXD1Q16676 465 aa12.09□□□□□ -0.47
CDH13-213ENST00000569454 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
CDH13-213ENST00000569454 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
CDH13-213ENST00000569454 MSH5O43196 834 aa11.59□□□□□ -0.55
CDH13-213ENST00000569454 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
CDH13-213ENST00000569454 PIAS4Q8N2W9 510 aaPredicted RBP11.18□□□□□ -0.62
CDH13-213ENST00000569454 PPP6R1Q9UPN7 881 aa10.9□□□□□ -0.66
CDH13-213ENST00000569454 PLPPR3Q6T4P5 718 aa10.88□□□□□ -0.67
CDH13-213ENST00000569454 ADRA2BP18089 450 aa10.83□□□□□ -0.68
CDH13-213ENST00000569454 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
CDH13-213ENST00000569454 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
CDH13-213ENST00000569454 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
CDH13-213ENST00000569454 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
CDH13-213ENST00000569454 ABCC9O60706 1549 aa10.38□□□□□ -0.75
CDH13-213ENST00000569454 DCAF1Q9Y4B6 1507 aa10.36□□□□□ -0.75
CDH13-213ENST00000569454 DMRT2Q9Y5R5 561 aa10.21□□□□□ -0.77
CDH13-213ENST00000569454 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
CDH13-213ENST00000569454 CACNB1Q02641 598 aaPredicted RBP10.17□□□□□ -0.78
CDH13-213ENST00000569454 SHROOM4Q9ULL8 1493 aa10.13□□□□□ -0.79
CDH13-213ENST00000569454 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
CDH13-213ENST00000569454 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
CDH13-213ENST00000569454 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
CDH13-213ENST00000569454 NACADO15069 1562 aa9.99□□□□□ -0.81
CDH13-213ENST00000569454 SUPT5HO00267 1087 aaKnown RBP9.88□□□□□ -0.83
CDH13-213ENST00000569454 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
CDH13-213ENST00000569454 SOCS7O14512 581 aa9.84□□□□□ -0.83
CDH13-213ENST00000569454 RB1CC1Q8TDY2 1594 aa9.84□□□□□ -0.83
CDH13-213ENST00000569454 RNF39Q9H2S5 420 aa9.81□□□□□ -0.84
CDH13-213ENST00000569454 LMTK3Q96Q04 1460 aa9.74□□□□□ -0.85
CDH13-213ENST00000569454 DCAF8L1A6NGE4 600 aa9.71□□□□□ -0.86
CDH13-213ENST00000569454 C1QBPQ07021 282 aaKnown RBP9.69□□□□□ -0.86
CDH13-213ENST00000569454 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
CDH13-213ENST00000569454 HOXD11P31277 338 aaPredicted RBP9.67□□□□□ -0.86
CDH13-213ENST00000569454 CUX2O14529 1486 aa9.66□□□□□ -0.86
CDH13-213ENST00000569454 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDH13-213ENST00000569454 BAZ1AQ9NRL2 1556 aaPredicted RBP9.61□□□□□ -0.87
CDH13-213ENST00000569454 ILDR2Q71H61 639 aa9.6□□□□□ -0.87
CDH13-213ENST00000569454 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
CDH13-213ENST00000569454 CECR2Q9BXF3 1484 aa9.54□□□□□ -0.88
CDH13-213ENST00000569454 UNC13AQ9UPW8 1703 aa9.54□□□□□ -0.88
CDH13-213ENST00000569454 SMARCA4P51532 1647 aa9.5□□□□□ -0.89
CDH13-213ENST00000569454 TOP2AP11388 1531 aaKnown RBP9.47□□□□□ -0.89
CDH13-213ENST00000569454 WIZO95785 1651 aa9.47□□□□□ -0.89
CDH13-213ENST00000569454 RNF216Q9NWF9 866 aaPredicted RBP9.46□□□□□ -0.9
CDH13-213ENST00000569454 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.9
CDH13-213ENST00000569454 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
CDH13-213ENST00000569454 PEG3Q9GZU2 1588 aa9.42□□□□□ -0.9
CDH13-213ENST00000569454 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
CDH13-213ENST00000569454 FBXO41Q8TF61 875 aa9.41□□□□□ -0.9
CDH13-213ENST00000569454 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.9
CDH13-213ENST00000569454 EIF4G1Q04637 1599 aaKnown RBP9.38□□□□□ -0.91
CDH13-213ENST00000569454 POTEHQ6S545 545 aa9.37□□□□□ -0.91
CDH13-213ENST00000569454 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
CDH13-213ENST00000569454 CCDC88BA6NC98 1476 aa9.3□□□□□ -0.92
CDH13-213ENST00000569454 DISP3Q9P2K9 1392 aa9.29□□□□□ -0.92
CDH13-213ENST00000569454 ATAD2BQ9ULI0 1458 aa9.27□□□□□ -0.93
CDH13-213ENST00000569454 BAZ1BQ9UIG0 1483 aaKnown RBP9.26□□□□□ -0.93
CDH13-213ENST00000569454 HMGXB3Q12766 1538 aa9.24□□□□□ -0.93
CDH13-213ENST00000569454 EEA1Q15075 1411 aa9.22□□□□□ -0.93
CDH13-213ENST00000569454 CC2D2AQ9P2K1 1620 aa9.22□□□□□ -0.93
CDH13-213ENST00000569454 NCAPD3P42695 1498 aa9.18□□□□□ -0.94
CDH13-213ENST00000569454 LOC105371045A0A1W2PR82 267 aa9.16□□□□□ -0.94
CDH13-213ENST00000569454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDH13-213ENST00000569454 ABCC8Q09428 1581 aa9.15□□□□□ -0.95
CDH13-213ENST00000569454 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
CDH13-213ENST00000569454 ERCC6Q03468 1493 aa9.08□□□□□ -0.96
CDH13-213ENST00000569454 FAM9AQ8IZU1 332 aaPredicted RBP9.08□□□□□ -0.96
CDH13-213ENST00000569454 TRIM26Q12899 539 aaPredicted RBP9.07□□□□□ -0.96
CDH13-213ENST00000569454 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
CDH13-213ENST00000569454 TOP2BQ02880 1626 aa9.05□□□□□ -0.96
CDH13-213ENST00000569454 BIVM-ERCC5R4GMW8 1640 aa9.05□□□□□ -0.96
CDH13-213ENST00000569454 GOLGA3Q08378 1498 aa9.05□□□□□ -0.96
CDH13-213ENST00000569454 ERCC6L2Q5T890 1561 aa9.04□□□□□ -0.96
CDH13-213ENST00000569454 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
CDH13-213ENST00000569454 KIF21BO75037 1637 aa9.04□□□□□ -0.96
CDH13-213ENST00000569454 CFTRP13569 1480 aa9.03□□□□□ -0.96
CDH13-213ENST00000569454 CEP164Q9UPV0 1460 aa9.03□□□□□ -0.96
CDH13-213ENST00000569454 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
CDH13-213ENST00000569454 TNIKQ9UKE5 1360 aa9.03□□□□□ -0.96
CDH13-213ENST00000569454 HRCP23327 699 aa9.03□□□□□ -0.96
CDH13-213ENST00000569454 CSRNP3Q8WYN3 585 aa9.02□□□□□ -0.97
CDH13-213ENST00000569454 SOGA1O94964 1423 aa9.02□□□□□ -0.97
CDH13-213ENST00000569454 DSG3P32926 999 aa9.01□□□□□ -0.97
CDH13-213ENST00000569454 CEP162Q5TB80 1403 aa8.99□□□□□ -0.97
CDH13-213ENST00000569454 NCBP3Q53F19 620 aaKnown RBP8.99□□□□□ -0.97
CDH13-213ENST00000569454 RIMBP3CA6NJZ7 1639 aa8.98□□□□□ -0.97
CDH13-213ENST00000569454 RIMBP3BA6NNM3 1639 aa8.98□□□□□ -0.97
CDH13-213ENST00000569454 RIMBP3Q9UFD9 1639 aa8.98□□□□□ -0.97
CDH13-213ENST00000569454 OSCARQ8IYS5 282 aa8.97□□□□□ -0.97
CDH13-213ENST00000569454 ERICH3Q5RHP9 1530 aa8.96□□□□□ -0.97
CDH13-213ENST00000569454 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
CDH13-213ENST00000569454 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
CDH13-213ENST00000569454 CUX1P39880 1505 aa8.93□□□□□ -0.98
CDH13-213ENST00000569454 RUSC2Q8N2Y8 1516 aa8.93□□□□□ -0.98
CDH13-213ENST00000569454 KIF27Q86VH2 1401 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms