RNA–Protein interactions for RNA: ENST00000569012.5

TCF4-242, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-242ENST00000569012 CUX1P39880 1505 aa11.22□□□□□ -0.61
TCF4-242ENST00000569012 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
TCF4-242ENST00000569012 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
TCF4-242ENST00000569012 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
TCF4-242ENST00000569012 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
TCF4-242ENST00000569012 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
TCF4-242ENST00000569012 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
TCF4-242ENST00000569012 SYNJ2O15056 1496 aa11.18□□□□□ -0.62
TCF4-242ENST00000569012 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
TCF4-242ENST00000569012 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
TCF4-242ENST00000569012 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
TCF4-242ENST00000569012 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
TCF4-242ENST00000569012 PBRM1Q86U86 1689 aa11.11□□□□□ -0.63
TCF4-242ENST00000569012 ABCA5Q8WWZ7 1642 aa11.09□□□□□ -0.63
TCF4-242ENST00000569012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.64
TCF4-242ENST00000569012 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
TCF4-242ENST00000569012 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
TCF4-242ENST00000569012 NUP160Q12769 1436 aa11.04□□□□□ -0.64
TCF4-242ENST00000569012 TOP2BQ02880 1626 aa11.02□□□□□ -0.64
TCF4-242ENST00000569012 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
TCF4-242ENST00000569012 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.65
TCF4-242ENST00000569012 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
TCF4-242ENST00000569012 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
TCF4-242ENST00000569012 ADAMTS12P58397 1594 aa11□□□□□ -0.65
TCF4-242ENST00000569012 CEP170Q5SW79 1584 aa11□□□□□ -0.65
TCF4-242ENST00000569012 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
TCF4-242ENST00000569012 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
TCF4-242ENST00000569012 SHROOM2Q13796 1616 aa10.99□□□□□ -0.65
TCF4-242ENST00000569012 JPH4Q96JJ6 628 aa10.93□□□□□ -0.66
TCF4-242ENST00000569012 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
TCF4-242ENST00000569012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
TCF4-242ENST00000569012 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
TCF4-242ENST00000569012 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
TCF4-242ENST00000569012 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
TCF4-242ENST00000569012 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
TCF4-242ENST00000569012 KIF13AQ9H1H9 1805 aa10.87□□□□□ -0.67
TCF4-242ENST00000569012 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
TCF4-242ENST00000569012 IGF1RP08069 1367 aa10.84□□□□□ -0.67
TCF4-242ENST00000569012 ABCC10Q5T3U5 1492 aa10.84□□□□□ -0.67
TCF4-242ENST00000569012 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
TCF4-242ENST00000569012 MAPKBP1O60336 1514 aa10.83□□□□□ -0.68
TCF4-242ENST00000569012 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
TCF4-242ENST00000569012 FAM69CQ0P6D2 419 aa10.81□□□□□ -0.68
TCF4-242ENST00000569012 ADCY10Q96PN6 1610 aa10.8□□□□□ -0.68
TCF4-242ENST00000569012 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
TCF4-242ENST00000569012 CUL7Q14999 1698 aa10.79□□□□□ -0.68
TCF4-242ENST00000569012 DIP2BQ9P265 1576 aa10.77□□□□□ -0.68
TCF4-242ENST00000569012 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
TCF4-242ENST00000569012 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
TCF4-242ENST00000569012 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
TCF4-242ENST00000569012 CARMIL1Q5VZK9 1371 aa10.75□□□□□ -0.69
TCF4-242ENST00000569012 APLP2Q06481 763 aa10.74□□□□□ -0.69
TCF4-242ENST00000569012 PTPRGP23470 1445 aa10.74□□□□□ -0.69
TCF4-242ENST00000569012 EEA1Q15075 1411 aa10.71□□□□□ -0.69
TCF4-242ENST00000569012 CARMIL2Q6F5E8 1435 aa10.71□□□□□ -0.69
TCF4-242ENST00000569012 TNIKQ9UKE5 1360 aa10.71□□□□□ -0.69
TCF4-242ENST00000569012 ABCC2Q92887 1545 aa10.7□□□□□ -0.7
TCF4-242ENST00000569012 KDM6BO15054 1643 aa10.69□□□□□ -0.7
TCF4-242ENST00000569012 UHRF1BP1LA0JNW5 1464 aa10.69□□□□□ -0.7
TCF4-242ENST00000569012 KDM4FA0A1W2PPD8 638 aa10.69□□□□□ -0.7
TCF4-242ENST00000569012 IQGAP2Q13576 1575 aa10.68□□□□□ -0.7
TCF4-242ENST00000569012 PLB1Q6P1J6 1458 aa10.68□□□□□ -0.7
TCF4-242ENST00000569012 GLI2P10070 1586 aa10.67□□□□□ -0.7
TCF4-242ENST00000569012 ASXL2Q76L83 1435 aa10.67□□□□□ -0.7
TCF4-242ENST00000569012 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
TCF4-242ENST00000569012 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
TCF4-242ENST00000569012 TSPOAP1O95153 1857 aa10.66□□□□□ -0.7
TCF4-242ENST00000569012 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
TCF4-242ENST00000569012 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
TCF4-242ENST00000569012 PPRC1Q5VV67 1664 aaKnown RBP10.63□□□□□ -0.71
TCF4-242ENST00000569012 RAPGEF2Q9Y4G8 1499 aa10.62□□□□□ -0.71
TCF4-242ENST00000569012 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
TCF4-242ENST00000569012 EPRSP07814 1512 aaKnown RBP10.6□□□□□ -0.71
TCF4-242ENST00000569012 ZNF219Q9P2Y4 722 aaPredicted RBP10.6□□□□□ -0.71
TCF4-242ENST00000569012 MAP3K4Q9Y6R4 1608 aa10.59□□□□□ -0.71
TCF4-242ENST00000569012 FKBP8Q14318 412 aa10.59□□□□□ -0.71
TCF4-242ENST00000569012 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
TCF4-242ENST00000569012 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
TCF4-242ENST00000569012 PRXQ9BXM0 1461 aa10.57□□□□□ -0.72
TCF4-242ENST00000569012 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
TCF4-242ENST00000569012 ZCCHC11Q5TAX3 1644 aaKnown RBP10.57□□□□□ -0.72
TCF4-242ENST00000569012 TEX14Q8IWB6 1497 aa10.56□□□□□ -0.72
TCF4-242ENST00000569012 KIF21BO75037 1637 aa10.55□□□□□ -0.72
TCF4-242ENST00000569012 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
TCF4-242ENST00000569012 UBTFP17480 764 aaKnown RBP10.54□□□□□ -0.72
TCF4-242ENST00000569012 ADGRL1O94910 1474 aa10.54□□□□□ -0.72
TCF4-242ENST00000569012 WDR7Q9Y4E6 1490 aa10.54□□□□□ -0.72
TCF4-242ENST00000569012 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
TCF4-242ENST00000569012 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
TCF4-242ENST00000569012 ABCA8O94911 1581 aa10.51□□□□□ -0.73
TCF4-242ENST00000569012 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
TCF4-242ENST00000569012 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
TCF4-242ENST00000569012 CFAP43Q8NDM7 1665 aa10.48□□□□□ -0.73
TCF4-242ENST00000569012 CAPN15O75808 1086 aa10.48□□□□□ -0.73
TCF4-242ENST00000569012 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
TCF4-242ENST00000569012 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
TCF4-242ENST00000569012 ARAP3Q8WWN8 1544 aa10.44□□□□□ -0.74
TCF4-242ENST00000569012 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
TCF4-242ENST00000569012 ATP10BO94823 1461 aa10.43□□□□□ -0.74
TCF4-242ENST00000569012 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms