RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 ARHGEF11O15085 1522 aa8.21□□□□□ -1.1
HERPUD1-213ENST00000568358 SLC4A1APQ9BWU0 796 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-213ENST00000568358 GRIN2BQ13224 1484 aa8.19□□□□□ -1.1
HERPUD1-213ENST00000568358 SNAPC4Q5SXM2 1469 aa8.19□□□□□ -1.1
HERPUD1-213ENST00000568358 MAGI1Q96QZ7 1491 aaPredicted RBP8.19□□□□□ -1.1
HERPUD1-213ENST00000568358 GAPVD1Q14C86 1478 aa8.18□□□□□ -1.1
HERPUD1-213ENST00000568358 SYNJ1O43426 1573 aa8.18□□□□□ -1.1
HERPUD1-213ENST00000568358 TRHP20396 242 aaPredicted RBP8.17□□□□□ -1.1
HERPUD1-213ENST00000568358 WRNQ14191 1432 aaPredicted RBP eCLIP8.17□□□□□ -1.1
HERPUD1-213ENST00000568358 PBRM1Q86U86 1689 aa8.17□□□□□ -1.1
HERPUD1-213ENST00000568358 SYNJ2O15056 1496 aa8.16□□□□□ -1.1
HERPUD1-213ENST00000568358 C1QBPQ07021 282 aaKnown RBP8.16□□□□□ -1.1
HERPUD1-213ENST00000568358 ABCA10Q8WWZ4 1543 aa8.15□□□□□ -1.1
HERPUD1-213ENST00000568358 NPM3O75607 178 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-213ENST00000568358 TOP2BQ02880 1626 aa8.12□□□□□ -1.11
HERPUD1-213ENST00000568358 ARAP1Q96P48 1450 aa8.12□□□□□ -1.11
HERPUD1-213ENST00000568358 ABCA5Q8WWZ7 1642 aa8.11□□□□□ -1.11
HERPUD1-213ENST00000568358 BIVM-ERCC5R4GMW8 1640 aa8.11□□□□□ -1.11
HERPUD1-213ENST00000568358 CLASP1Q7Z460 1538 aa8.11□□□□□ -1.11
HERPUD1-213ENST00000568358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.08□□□□□ -1.124e-6■□□□□ 11.1
HERPUD1-213ENST00000568358 GRIN2AQ12879 1464 aa8.07□□□□□ -1.12
HERPUD1-213ENST00000568358 FHAD1B1AJZ9 1412 aa8.07□□□□□ -1.12
HERPUD1-213ENST00000568358 ERICH3Q5RHP9 1530 aa8.06□□□□□ -1.12
HERPUD1-213ENST00000568358 ADAMTS12P58397 1594 aa8.05□□□□□ -1.12
HERPUD1-213ENST00000568358 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
HERPUD1-213ENST00000568358 NUP160Q12769 1436 aa8.03□□□□□ -1.12
HERPUD1-213ENST00000568358 CEP170Q5SW79 1584 aa8.02□□□□□ -1.13
HERPUD1-213ENST00000568358 NPM1P06748 294 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERPUD1-213ENST00000568358 KIF27Q86VH2 1401 aa8.01□□□□□ -1.13
HERPUD1-213ENST00000568358 PRG4Q92954 1404 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-213ENST00000568358 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
HERPUD1-213ENST00000568358 IGF1RP08069 1367 aa7.97□□□□□ -1.13
HERPUD1-213ENST00000568358 ERCC6L2Q5T890 1561 aa7.97□□□□□ -1.13
HERPUD1-213ENST00000568358 CUL7Q14999 1698 aa7.96□□□□□ -1.13
HERPUD1-213ENST00000568358 CARMIL1Q5VZK9 1371 aa7.95□□□□□ -1.14
HERPUD1-213ENST00000568358 KIAA0586Q9BVV6 1533 aa7.94□□□□□ -1.14
HERPUD1-213ENST00000568358 TTBK1Q5TCY1 1321 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-213ENST00000568358 RUSC2Q8N2Y8 1516 aa7.93□□□□□ -1.14
HERPUD1-213ENST00000568358 ZBTB22O15209 634 aa7.91□□□□□ -1.14
HERPUD1-213ENST00000568358 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
HERPUD1-213ENST00000568358 CARMIL2Q6F5E8 1435 aa7.91□□□□□ -1.14
HERPUD1-213ENST00000568358 PTPRGP23470 1445 aa7.89□□□□□ -1.15
HERPUD1-213ENST00000568358 FAM9AQ8IZU1 332 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-213ENST00000568358 KIF13AQ9H1H9 1805 aa7.89□□□□□ -1.15
HERPUD1-213ENST00000568358 TNIKQ9UKE5 1360 aa7.87□□□□□ -1.15
HERPUD1-213ENST00000568358 RAPGEF2Q9Y4G8 1499 aa7.87□□□□□ -1.15
HERPUD1-213ENST00000568358 IQGAP2Q13576 1575 aa7.86□□□□□ -1.15
HERPUD1-213ENST00000568358 TSPOAP1O95153 1857 aa7.85□□□□□ -1.15
HERPUD1-213ENST00000568358 ADCY10Q96PN6 1610 aa7.85□□□□□ -1.15
HERPUD1-213ENST00000568358 MAPKBP1O60336 1514 aa7.85□□□□□ -1.15
HERPUD1-213ENST00000568358 ABCC10Q5T3U5 1492 aa7.85□□□□□ -1.15
HERPUD1-213ENST00000568358 U3KPZ7 1027 aaPredicted RBP7.84□□□□□ -1.15
HERPUD1-213ENST00000568358 DIP2BQ9P265 1576 aa7.81□□□□□ -1.16
HERPUD1-213ENST00000568358 UACAQ9BZF9 1416 aa7.81□□□□□ -1.16
HERPUD1-213ENST00000568358 ABCC2Q92887 1545 aa7.81□□□□□ -1.16
HERPUD1-213ENST00000568358 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
HERPUD1-213ENST00000568358 CTTNBP2Q8WZ74 1663 aa7.8□□□□□ -1.16
HERPUD1-213ENST00000568358 UGGT2Q9NYU1 1516 aa7.8□□□□□ -1.16
HERPUD1-213ENST00000568358 UHRF1BP1LA0JNW5 1464 aa7.8□□□□□ -1.16
HERPUD1-213ENST00000568358 GOLGA3Q08378 1498 aa7.8□□□□□ -1.16
HERPUD1-213ENST00000568358 ASXL2Q76L83 1435 aa7.79□□□□□ -1.16
HERPUD1-213ENST00000568358 DISP1Q96F81 1524 aa7.79□□□□□ -1.16
HERPUD1-213ENST00000568358 KDM6BO15054 1643 aa7.78□□□□□ -1.16
HERPUD1-213ENST00000568358 APLP2Q06481 763 aa7.77□□□□□ -1.17
HERPUD1-213ENST00000568358 KIAA0556O60303 1618 aa7.77□□□□□ -1.17
HERPUD1-213ENST00000568358 CAPN15O75808 1086 aa7.76□□□□□ -1.17
HERPUD1-213ENST00000568358 KCNH8Q96L42 1107 aa7.76□□□□□ -1.17
HERPUD1-213ENST00000568358 KDM5BQ9UGL1 1544 aa7.75□□□□□ -1.17
HERPUD1-213ENST00000568358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-213ENST00000568358 HNRNPUL2Q1KMD3 747 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-213ENST00000568358 GLI2P10070 1586 aa7.75□□□□□ -1.17
HERPUD1-213ENST00000568358 PRXQ9BXM0 1461 aa7.75□□□□□ -1.17
HERPUD1-213ENST00000568358 ZCCHC11Q5TAX3 1644 aaKnown RBP7.74□□□□□ -1.17
HERPUD1-213ENST00000568358 SLC4A2P04920 1241 aa7.74□□□□□ -1.17
HERPUD1-213ENST00000568358 P3H3Q8IVL6 736 aa7.74□□□□□ -1.17
HERPUD1-213ENST00000568358 TEX14Q8IWB6 1497 aa7.74□□□□□ -1.17
HERPUD1-213ENST00000568358 EPRSP07814 1512 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-213ENST00000568358 EEA1Q15075 1411 aa7.72□□□□□ -1.17
HERPUD1-213ENST00000568358 RANGAP1P46060 587 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-213ENST00000568358 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-213ENST00000568358 WDR7Q9Y4E6 1490 aa7.71□□□□□ -1.18
HERPUD1-213ENST00000568358 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
HERPUD1-213ENST00000568358 ARID3CA6NKF2 412 aa7.7□□□□□ -1.18
HERPUD1-213ENST00000568358 DSG3P32926 999 aa7.7□□□□□ -1.18
HERPUD1-213ENST00000568358 PPRC1Q5VV67 1664 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-213ENST00000568358 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
HERPUD1-213ENST00000568358 ABCA8O94911 1581 aa7.69□□□□□ -1.18
HERPUD1-213ENST00000568358 CFAP43Q8NDM7 1665 aa7.68□□□□□ -1.18
HERPUD1-213ENST00000568358 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
HERPUD1-213ENST00000568358 UBTFP17480 764 aaKnown RBP7.67□□□□□ -1.18
HERPUD1-213ENST00000568358 SAMD1Q6SPF0 538 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-213ENST00000568358 ZNF219Q9P2Y4 722 aaPredicted RBP7.67□□□□□ -1.18
HERPUD1-213ENST00000568358 PLEKHD1A6NEE1 506 aa7.66□□□□□ -1.18
HERPUD1-213ENST00000568358 ATP10BO94823 1461 aa7.65□□□□□ -1.18
HERPUD1-213ENST00000568358 MAGI3Q5TCQ9 1506 aa7.65□□□□□ -1.18
HERPUD1-213ENST00000568358 RAPGEF6Q8TEU7 1601 aa7.65□□□□□ -1.18
HERPUD1-213ENST00000568358 SAMD9Q5K651 1589 aa7.64□□□□□ -1.19
HERPUD1-213ENST00000568358 PHLDB1Q86UU1 1377 aa7.64□□□□□ -1.19
HERPUD1-213ENST00000568358 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-213ENST00000568358 COL17A1Q9UMD9 1497 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms