RNA–Protein interactions for RNA: ENST00000568078.5

SNUPN-209, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-209ENST00000568078 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
SNUPN-209ENST00000568078 WDR62O43379 1518 aa16.3■□□□□ 0.2
SNUPN-209ENST00000568078 CUX2O14529 1486 aa16.29■□□□□ 0.2
SNUPN-209ENST00000568078 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
SNUPN-209ENST00000568078 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
SNUPN-209ENST00000568078 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
SNUPN-209ENST00000568078 WRNQ14191 1432 aaPredicted RBP eCLIP16.23■□□□□ 0.19
SNUPN-209ENST00000568078 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
SNUPN-209ENST00000568078 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
SNUPN-209ENST00000568078 CUX1P39880 1505 aa16.23■□□□□ 0.19
SNUPN-209ENST00000568078 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
SNUPN-209ENST00000568078 SSUH2Q9Y2M2 353 aa16.16■□□□□ 0.18
SNUPN-209ENST00000568078 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
SNUPN-209ENST00000568078 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
SNUPN-209ENST00000568078 SOGA1O94964 1423 aa16.13■□□□□ 0.17
SNUPN-209ENST00000568078 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
SNUPN-209ENST00000568078 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
SNUPN-209ENST00000568078 PROM2Q8N271 834 aa16.11■□□□□ 0.17
SNUPN-209ENST00000568078 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
SNUPN-209ENST00000568078 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
SNUPN-209ENST00000568078 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
SNUPN-209ENST00000568078 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
SNUPN-209ENST00000568078 TDRD9Q8NDG6 1382 aaKnown RBP16.04■□□□□ 0.16
SNUPN-209ENST00000568078 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
SNUPN-209ENST00000568078 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
SNUPN-209ENST00000568078 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
SNUPN-209ENST00000568078 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
SNUPN-209ENST00000568078 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
SNUPN-209ENST00000568078 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
SNUPN-209ENST00000568078 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
SNUPN-209ENST00000568078 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
SNUPN-209ENST00000568078 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
SNUPN-209ENST00000568078 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
SNUPN-209ENST00000568078 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
SNUPN-209ENST00000568078 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
SNUPN-209ENST00000568078 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
SNUPN-209ENST00000568078 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
SNUPN-209ENST00000568078 CHMP7Q8WUX9 453 aaPredicted RBP15.85■□□□□ 0.13
SNUPN-209ENST00000568078 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
SNUPN-209ENST00000568078 REM2Q8IYK8 340 aaPredicted RBP15.81■□□□□ 0.12
SNUPN-209ENST00000568078 SPDYE1Q8NFV5 336 aaPredicted RBP15.8■□□□□ 0.12
SNUPN-209ENST00000568078 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
SNUPN-209ENST00000568078 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
SNUPN-209ENST00000568078 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
SNUPN-209ENST00000568078 CHD1O14646 1710 aa15.77■□□□□ 0.11
SNUPN-209ENST00000568078 SYNJ2O15056 1496 aa15.75■□□□□ 0.11
SNUPN-209ENST00000568078 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
SNUPN-209ENST00000568078 IGF1RP08069 1367 aa15.75■□□□□ 0.11
SNUPN-209ENST00000568078 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
SNUPN-209ENST00000568078 CARMIL1Q5VZK9 1371 aa15.72■□□□□ 0.11
SNUPN-209ENST00000568078 CUL7Q14999 1698 aa15.7■□□□□ 0.1
SNUPN-209ENST00000568078 VASPP50552 380 aaPredicted RBP15.69■□□□□ 0.1
SNUPN-209ENST00000568078 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
SNUPN-209ENST00000568078 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
SNUPN-209ENST00000568078 EEA1Q15075 1411 aa15.68■□□□□ 0.1
SNUPN-209ENST00000568078 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
SNUPN-209ENST00000568078 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
SNUPN-209ENST00000568078 CEP170Q5SW79 1584 aa15.58■□□□□ 0.09
SNUPN-209ENST00000568078 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
SNUPN-209ENST00000568078 PRR29P0C7W0 189 aa15.57■□□□□ 0.08
SNUPN-209ENST00000568078 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
SNUPN-209ENST00000568078 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
SNUPN-209ENST00000568078 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
SNUPN-209ENST00000568078 NUP160Q12769 1436 aa15.55■□□□□ 0.08
SNUPN-209ENST00000568078 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
SNUPN-209ENST00000568078 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
SNUPN-209ENST00000568078 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
SNUPN-209ENST00000568078 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
SNUPN-209ENST00000568078 MIER1Q8N108 512 aa15.51■□□□□ 0.07
SNUPN-209ENST00000568078 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
SNUPN-209ENST00000568078 KIF21BO75037 1637 aa15.49■□□□□ 0.07
SNUPN-209ENST00000568078 KIAA0586Q9BVV6 1533 aa15.48■□□□□ 0.07
SNUPN-209ENST00000568078 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
SNUPN-209ENST00000568078 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
SNUPN-209ENST00000568078 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
SNUPN-209ENST00000568078 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
SNUPN-209ENST00000568078 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
SNUPN-209ENST00000568078 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
SNUPN-209ENST00000568078 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
SNUPN-209ENST00000568078 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
SNUPN-209ENST00000568078 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
SNUPN-209ENST00000568078 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
SNUPN-209ENST00000568078 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
SNUPN-209ENST00000568078 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
SNUPN-209ENST00000568078 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
SNUPN-209ENST00000568078 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
SNUPN-209ENST00000568078 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
SNUPN-209ENST00000568078 CARMIL2Q6F5E8 1435 aa15.39■□□□□ 0.05
SNUPN-209ENST00000568078 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
SNUPN-209ENST00000568078 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
SNUPN-209ENST00000568078 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
SNUPN-209ENST00000568078 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
SNUPN-209ENST00000568078 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
SNUPN-209ENST00000568078 UGGT2Q9NYU1 1516 aa15.33■□□□□ 0.04
SNUPN-209ENST00000568078 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNUPN-209ENST00000568078 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
SNUPN-209ENST00000568078 KIAA0556O60303 1618 aa15.29■□□□□ 0.04
SNUPN-209ENST00000568078 PTPRGP23470 1445 aa15.29■□□□□ 0.04
SNUPN-209ENST00000568078 SPOCK2Q92563 424 aa15.29■□□□□ 0.04
SNUPN-209ENST00000568078 DISP1Q96F81 1524 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms