RNA–Protein interactions for RNA: ENST00000568078.5

SNUPN-209, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-209ENST00000568078 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
SNUPN-209ENST00000568078 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
SNUPN-209ENST00000568078 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
SNUPN-209ENST00000568078 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
SNUPN-209ENST00000568078 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
SNUPN-209ENST00000568078 FOXD1Q16676 465 aa22.48■■□□□ 1.19
SNUPN-209ENST00000568078 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
SNUPN-209ENST00000568078 ADRA2BP18089 450 aa21.7■■□□□ 1.06
SNUPN-209ENST00000568078 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
SNUPN-209ENST00000568078 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
SNUPN-209ENST00000568078 MSH5O43196 834 aa20.77■□□□□ 0.92
SNUPN-209ENST00000568078 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
SNUPN-209ENST00000568078 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
SNUPN-209ENST00000568078 KCNA4P22459 653 aa19.82■□□□□ 0.76
SNUPN-209ENST00000568078 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
SNUPN-209ENST00000568078 NCBP3Q53F19 620 aaKnown RBP19.74■□□□□ 0.75
SNUPN-209ENST00000568078 MAPK8IP2Q13387 824 aaPredicted RBP19.61■□□□□ 0.73
SNUPN-209ENST00000568078 CNKSR2Q8WXI2 1034 aa19.59■□□□□ 0.73
SNUPN-209ENST00000568078 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
SNUPN-209ENST00000568078 NPM3O75607 178 aaKnown RBP19.37■□□□□ 0.69
SNUPN-209ENST00000568078 ABCC9O60706 1549 aa19.34■□□□□ 0.69
SNUPN-209ENST00000568078 RNF216Q9NWF9 866 aaPredicted RBP19.17■□□□□ 0.66
SNUPN-209ENST00000568078 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
SNUPN-209ENST00000568078 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
SNUPN-209ENST00000568078 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
SNUPN-209ENST00000568078 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
SNUPN-209ENST00000568078 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
SNUPN-209ENST00000568078 POTEDQ86YR6 584 aa18.61■□□□□ 0.57
SNUPN-209ENST00000568078 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
SNUPN-209ENST00000568078 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
SNUPN-209ENST00000568078 NACADO15069 1562 aa18.58■□□□□ 0.56
SNUPN-209ENST00000568078 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
SNUPN-209ENST00000568078 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
SNUPN-209ENST00000568078 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
SNUPN-209ENST00000568078 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
SNUPN-209ENST00000568078 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
SNUPN-209ENST00000568078 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
SNUPN-209ENST00000568078 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
SNUPN-209ENST00000568078 ZBTB22O15209 634 aa18.21■□□□□ 0.51
SNUPN-209ENST00000568078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNUPN-209ENST00000568078 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
SNUPN-209ENST00000568078 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
SNUPN-209ENST00000568078 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
SNUPN-209ENST00000568078 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
SNUPN-209ENST00000568078 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
SNUPN-209ENST00000568078 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
SNUPN-209ENST00000568078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
SNUPN-209ENST00000568078 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
SNUPN-209ENST00000568078 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
SNUPN-209ENST00000568078 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
SNUPN-209ENST00000568078 ATXN8OSP0DMR3 200 aa17.63■□□□□ 0.41
SNUPN-209ENST00000568078 APLP2Q06481 763 aa17.6■□□□□ 0.41
SNUPN-209ENST00000568078 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
SNUPN-209ENST00000568078 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.39
SNUPN-209ENST00000568078 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
SNUPN-209ENST00000568078 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
SNUPN-209ENST00000568078 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
SNUPN-209ENST00000568078 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
SNUPN-209ENST00000568078 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
SNUPN-209ENST00000568078 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
SNUPN-209ENST00000568078 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
SNUPN-209ENST00000568078 CAPN15O75808 1086 aa17.28■□□□□ 0.36
SNUPN-209ENST00000568078 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
SNUPN-209ENST00000568078 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
SNUPN-209ENST00000568078 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
SNUPN-209ENST00000568078 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
SNUPN-209ENST00000568078 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
SNUPN-209ENST00000568078 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
SNUPN-209ENST00000568078 BAZ1BQ9UIG0 1483 aaKnown RBP17.15■□□□□ 0.34
SNUPN-209ENST00000568078 WIZO95785 1651 aa17.15■□□□□ 0.34
SNUPN-209ENST00000568078 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
SNUPN-209ENST00000568078 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
SNUPN-209ENST00000568078 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
SNUPN-209ENST00000568078 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
SNUPN-209ENST00000568078 POLA2Q14181 598 aa16.95■□□□□ 0.3
SNUPN-209ENST00000568078 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
SNUPN-209ENST00000568078 ABCB7O75027 752 aa16.94■□□□□ 0.3
SNUPN-209ENST00000568078 DSG3P32926 999 aa16.93■□□□□ 0.3
SNUPN-209ENST00000568078 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
SNUPN-209ENST00000568078 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.28
SNUPN-209ENST00000568078 NESP48681 1621 aa16.75■□□□□ 0.27
SNUPN-209ENST00000568078 FBLN2P98095 1184 aa16.75■□□□□ 0.27
SNUPN-209ENST00000568078 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
SNUPN-209ENST00000568078 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
SNUPN-209ENST00000568078 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
SNUPN-209ENST00000568078 MKRN4PQ13434 485 aaPredicted RBP16.63■□□□□ 0.25
SNUPN-209ENST00000568078 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
SNUPN-209ENST00000568078 CFTRP13569 1480 aa16.6■□□□□ 0.25
SNUPN-209ENST00000568078 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
SNUPN-209ENST00000568078 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
SNUPN-209ENST00000568078 FKBP8Q14318 412 aa16.52■□□□□ 0.24
SNUPN-209ENST00000568078 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
SNUPN-209ENST00000568078 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
SNUPN-209ENST00000568078 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
SNUPN-209ENST00000568078 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
SNUPN-209ENST00000568078 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
SNUPN-209ENST00000568078 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
SNUPN-209ENST00000568078 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
SNUPN-209ENST00000568078 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
SNUPN-209ENST00000568078 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms