RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
CDH13-210ENST00000567445 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
CDH13-210ENST00000567445 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
CDH13-210ENST00000567445 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
CDH13-210ENST00000567445 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
CDH13-210ENST00000567445 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
CDH13-210ENST00000567445 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
CDH13-210ENST00000567445 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
CDH13-210ENST00000567445 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
CDH13-210ENST00000567445 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
CDH13-210ENST00000567445 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
CDH13-210ENST00000567445 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
CDH13-210ENST00000567445 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
CDH13-210ENST00000567445 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
CDH13-210ENST00000567445 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
CDH13-210ENST00000567445 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
CDH13-210ENST00000567445 GRIN2AQ12879 1464 aa16.27■□□□□ 0.19
CDH13-210ENST00000567445 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
CDH13-210ENST00000567445 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
CDH13-210ENST00000567445 NUP160Q12769 1436 aa16.23■□□□□ 0.19
CDH13-210ENST00000567445 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
CDH13-210ENST00000567445 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
CDH13-210ENST00000567445 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
CDH13-210ENST00000567445 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
CDH13-210ENST00000567445 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
CDH13-210ENST00000567445 JPH4Q96JJ6 628 aa16.06■□□□□ 0.16
CDH13-210ENST00000567445 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
CDH13-210ENST00000567445 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
CDH13-210ENST00000567445 CAPN15O75808 1086 aa16.04■□□□□ 0.16
CDH13-210ENST00000567445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
CDH13-210ENST00000567445 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
CDH13-210ENST00000567445 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
CDH13-210ENST00000567445 IGF1RP08069 1367 aa16.03■□□□□ 0.16
CDH13-210ENST00000567445 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
CDH13-210ENST00000567445 APLP2Q06481 763 aa16■□□□□ 0.15
CDH13-210ENST00000567445 CUL7Q14999 1698 aa15.99■□□□□ 0.15
CDH13-210ENST00000567445 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
CDH13-210ENST00000567445 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
CDH13-210ENST00000567445 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
CDH13-210ENST00000567445 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
CDH13-210ENST00000567445 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH13-210ENST00000567445 DSG3P32926 999 aa15.89■□□□□ 0.13
CDH13-210ENST00000567445 KIF13AQ9H1H9 1805 aa15.88■□□□□ 0.13
CDH13-210ENST00000567445 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
CDH13-210ENST00000567445 MAPKBP1O60336 1514 aa15.86■□□□□ 0.13
CDH13-210ENST00000567445 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
CDH13-210ENST00000567445 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
CDH13-210ENST00000567445 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
CDH13-210ENST00000567445 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.13
CDH13-210ENST00000567445 FAM69CQ0P6D2 419 aa15.82■□□□□ 0.12
CDH13-210ENST00000567445 PTPRGP23470 1445 aa15.82■□□□□ 0.12
CDH13-210ENST00000567445 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
CDH13-210ENST00000567445 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
CDH13-210ENST00000567445 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
CDH13-210ENST00000567445 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
CDH13-210ENST00000567445 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
CDH13-210ENST00000567445 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
CDH13-210ENST00000567445 ABCC2Q92887 1545 aa15.73■□□□□ 0.11
CDH13-210ENST00000567445 DISP1Q96F81 1524 aa15.73■□□□□ 0.11
CDH13-210ENST00000567445 UGGT2Q9NYU1 1516 aa15.71■□□□□ 0.11
CDH13-210ENST00000567445 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.1
CDH13-210ENST00000567445 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
CDH13-210ENST00000567445 ABCB7O75027 752 aa15.67■□□□□ 0.1
CDH13-210ENST00000567445 ASXL2Q76L83 1435 aa15.67■□□□□ 0.1
CDH13-210ENST00000567445 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
CDH13-210ENST00000567445 TSPOAP1O95153 1857 aa15.66■□□□□ 0.1
CDH13-210ENST00000567445 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
CDH13-210ENST00000567445 KDM6BO15054 1643 aa15.64■□□□□ 0.09
CDH13-210ENST00000567445 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
CDH13-210ENST00000567445 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
CDH13-210ENST00000567445 GLI2P10070 1586 aa15.63■□□□□ 0.09
CDH13-210ENST00000567445 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
CDH13-210ENST00000567445 ZBTB22O15209 634 aa15.62■□□□□ 0.09
CDH13-210ENST00000567445 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
CDH13-210ENST00000567445 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
CDH13-210ENST00000567445 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
CDH13-210ENST00000567445 PPRC1Q5VV67 1664 aaKnown RBP15.57■□□□□ 0.08
CDH13-210ENST00000567445 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
CDH13-210ENST00000567445 WDR7Q9Y4E6 1490 aa15.52■□□□□ 0.07
CDH13-210ENST00000567445 ABCA8O94911 1581 aa15.51■□□□□ 0.07
CDH13-210ENST00000567445 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
CDH13-210ENST00000567445 TEX14Q8IWB6 1497 aa15.5■□□□□ 0.07
CDH13-210ENST00000567445 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
CDH13-210ENST00000567445 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
CDH13-210ENST00000567445 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
CDH13-210ENST00000567445 COL17A1Q9UMD9 1497 aaPredicted RBP15.47■□□□□ 0.07
CDH13-210ENST00000567445 POLA2Q14181 598 aa15.46■□□□□ 0.07
CDH13-210ENST00000567445 EEA1Q15075 1411 aa15.45■□□□□ 0.06
CDH13-210ENST00000567445 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
CDH13-210ENST00000567445 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
CDH13-210ENST00000567445 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
CDH13-210ENST00000567445 CFAP43Q8NDM7 1665 aa15.42■□□□□ 0.06
CDH13-210ENST00000567445 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
CDH13-210ENST00000567445 MAGI3Q5TCQ9 1506 aa15.42■□□□□ 0.06
CDH13-210ENST00000567445 ATP10BO94823 1461 aa15.39■□□□□ 0.05
CDH13-210ENST00000567445 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
CDH13-210ENST00000567445 ADGRL1O94910 1474 aa15.37■□□□□ 0.05
CDH13-210ENST00000567445 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
CDH13-210ENST00000567445 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
CDH13-210ENST00000567445 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms