RNA–Protein interactions for RNA: ENST00000566553.1

LINC02011-201, Transcript of long intergenic non-protein coding RNA 2011, humanhuman

TSL 2 BASIC

Gene LINC02011, Length 3,830 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02011-201ENST00000566553 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
LINC02011-201ENST00000566553 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
LINC02011-201ENST00000566553 PPARGC1BQ86YN6 1023 aaKnown RBP14.25□□□□□ -0.13
LINC02011-201ENST00000566553 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
LINC02011-201ENST00000566553 CDK11AQ9UQ88 783 aaPredicted RBP14.23□□□□□ -0.13
LINC02011-201ENST00000566553 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
LINC02011-201ENST00000566553 PRG4Q92954 1404 aaPredicted RBP14.22□□□□□ -0.13
LINC02011-201ENST00000566553 PTPRGP23470 1445 aa14.22□□□□□ -0.13
LINC02011-201ENST00000566553 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
LINC02011-201ENST00000566553 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
LINC02011-201ENST00000566553 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
LINC02011-201ENST00000566553 FAM69CQ0P6D2 419 aa14.16□□□□□ -0.14
LINC02011-201ENST00000566553 HRCP23327 699 aa14.15□□□□□ -0.14
LINC02011-201ENST00000566553 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
LINC02011-201ENST00000566553 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
LINC02011-201ENST00000566553 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
LINC02011-201ENST00000566553 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
LINC02011-201ENST00000566553 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
LINC02011-201ENST00000566553 ITGAEP38570 1179 aa14.07□□□□□ -0.16
LINC02011-201ENST00000566553 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
LINC02011-201ENST00000566553 CLIP1P30622 1438 aa14.07□□□□□ -0.16
LINC02011-201ENST00000566553 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
LINC02011-201ENST00000566553 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
LINC02011-201ENST00000566553 ARHGEF11O15085 1522 aa13.99□□□□□ -0.17
LINC02011-201ENST00000566553 ARID4BQ4LE39 1312 aaPredicted RBP13.99□□□□□ -0.17
LINC02011-201ENST00000566553 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
LINC02011-201ENST00000566553 ADAMTS12P58397 1594 aa13.98□□□□□ -0.17
LINC02011-201ENST00000566553 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
LINC02011-201ENST00000566553 CHD1O14646 1710 aa13.98□□□□□ -0.17
LINC02011-201ENST00000566553 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
LINC02011-201ENST00000566553 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
LINC02011-201ENST00000566553 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
LINC02011-201ENST00000566553 NUP160Q12769 1436 aa13.96□□□□□ -0.18
LINC02011-201ENST00000566553 CUL7Q14999 1698 aa13.95□□□□□ -0.18
LINC02011-201ENST00000566553 ESF1Q9H501 851 aaKnown RBP13.95□□□□□ -0.18
LINC02011-201ENST00000566553 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
LINC02011-201ENST00000566553 IQGAP2Q13576 1575 aa13.93□□□□□ -0.18
LINC02011-201ENST00000566553 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
LINC02011-201ENST00000566553 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
LINC02011-201ENST00000566553 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
LINC02011-201ENST00000566553 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
LINC02011-201ENST00000566553 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
LINC02011-201ENST00000566553 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
LINC02011-201ENST00000566553 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
LINC02011-201ENST00000566553 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
LINC02011-201ENST00000566553 MLECQ14165 292 aa13.88□□□□□ -0.19
LINC02011-201ENST00000566553 PLB1Q6P1J6 1458 aa13.85□□□□□ -0.19
LINC02011-201ENST00000566553 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
LINC02011-201ENST00000566553 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
LINC02011-201ENST00000566553 TSPY4P0CV99 314 aa13.84□□□□□ -0.19
LINC02011-201ENST00000566553 TSPY10P0CW01 314 aa13.84□□□□□ -0.19
LINC02011-201ENST00000566553 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
LINC02011-201ENST00000566553 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
LINC02011-201ENST00000566553 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
LINC02011-201ENST00000566553 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
LINC02011-201ENST00000566553 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
LINC02011-201ENST00000566553 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
LINC02011-201ENST00000566553 PRKCSHP14314 528 aaPredicted RBP13.78□□□□□ -0.2
LINC02011-201ENST00000566553 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
LINC02011-201ENST00000566553 ASXL2Q76L83 1435 aa13.75□□□□□ -0.21
LINC02011-201ENST00000566553 KIF21BO75037 1637 aa13.74□□□□□ -0.21
LINC02011-201ENST00000566553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC02011-201ENST00000566553 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC02011-201ENST00000566553 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
LINC02011-201ENST00000566553 CD109Q6YHK3 1445 aa13.72□□□□□ -0.21
LINC02011-201ENST00000566553 CLASP1Q7Z460 1538 aa13.71□□□□□ -0.21
LINC02011-201ENST00000566553 KANK4Q5T7N3 995 aaPredicted RBP13.71□□□□□ -0.21
LINC02011-201ENST00000566553 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
LINC02011-201ENST00000566553 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
LINC02011-201ENST00000566553 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
LINC02011-201ENST00000566553 GGT6Q6P531 493 aa13.69□□□□□ -0.22
LINC02011-201ENST00000566553 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
LINC02011-201ENST00000566553 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
LINC02011-201ENST00000566553 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
LINC02011-201ENST00000566553 EFCAB5A4FU69 1503 aa13.66□□□□□ -0.22
LINC02011-201ENST00000566553 KIAA0556O60303 1618 aa13.65□□□□□ -0.22
LINC02011-201ENST00000566553 CCDC18Q5T9S5 1454 aa13.65□□□□□ -0.22
LINC02011-201ENST00000566553 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
LINC02011-201ENST00000566553 ATP10BO94823 1461 aa13.64□□□□□ -0.23
LINC02011-201ENST00000566553 CDK13Q14004 1512 aaKnown RBP13.63□□□□□ -0.23
LINC02011-201ENST00000566553 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
LINC02011-201ENST00000566553 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
LINC02011-201ENST00000566553 BCANQ96GW7 911 aa13.62□□□□□ -0.23
LINC02011-201ENST00000566553 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
LINC02011-201ENST00000566553 BCL11AQ9H165 835 aa13.6□□□□□ -0.23
LINC02011-201ENST00000566553 ZNF644Q9H582 1327 aaPredicted RBP13.6□□□□□ -0.23
LINC02011-201ENST00000566553 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
LINC02011-201ENST00000566553 WDR7Q9Y4E6 1490 aa13.59□□□□□ -0.23
LINC02011-201ENST00000566553 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
LINC02011-201ENST00000566553 EPRSP07814 1512 aaKnown RBP13.58□□□□□ -0.23
LINC02011-201ENST00000566553 KIF3BO15066 747 aa13.58□□□□□ -0.24
LINC02011-201ENST00000566553 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
LINC02011-201ENST00000566553 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
LINC02011-201ENST00000566553 SENP3Q9H4L4 574 aaPredicted RBP13.56□□□□□ -0.24
LINC02011-201ENST00000566553 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
LINC02011-201ENST00000566553 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
LINC02011-201ENST00000566553 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
LINC02011-201ENST00000566553 RAPGEF6Q8TEU7 1601 aa13.53□□□□□ -0.24
LINC02011-201ENST00000566553 TSPOAP1O95153 1857 aa13.52□□□□□ -0.24
LINC02011-201ENST00000566553 HECW1Q76N89 1606 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms