RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 CUL7Q14999 1698 aa15.62■□□□□ 0.09
TUBGCP4-211ENST00000566251 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
TUBGCP4-211ENST00000566251 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
TUBGCP4-211ENST00000566251 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
TUBGCP4-211ENST00000566251 CLIP1P30622 1438 aa15.56■□□□□ 0.08
TUBGCP4-211ENST00000566251 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
TUBGCP4-211ENST00000566251 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
TUBGCP4-211ENST00000566251 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
TUBGCP4-211ENST00000566251 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
TUBGCP4-211ENST00000566251 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
TUBGCP4-211ENST00000566251 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
TUBGCP4-211ENST00000566251 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
TUBGCP4-211ENST00000566251 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
TUBGCP4-211ENST00000566251 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
TUBGCP4-211ENST00000566251 APLP2Q06481 763 aa15.44■□□□□ 0.06
TUBGCP4-211ENST00000566251 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
TUBGCP4-211ENST00000566251 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
TUBGCP4-211ENST00000566251 ADAMTS12P58397 1594 aa15.43■□□□□ 0.06
TUBGCP4-211ENST00000566251 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
TUBGCP4-211ENST00000566251 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
TUBGCP4-211ENST00000566251 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
TUBGCP4-211ENST00000566251 FBLN2P98095 1184 aa15.38■□□□□ 0.05
TUBGCP4-211ENST00000566251 CTTNBP2Q8WZ74 1663 aa15.37■□□□□ 0.05
TUBGCP4-211ENST00000566251 EFCAB5A4FU69 1503 aa15.36■□□□□ 0.05
TUBGCP4-211ENST00000566251 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
TUBGCP4-211ENST00000566251 ARHGAP35Q9NRY4 1499 aa15.35■□□□□ 0.05
TUBGCP4-211ENST00000566251 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP4-211ENST00000566251 RTN4Q9NQC3 1192 aaKnown RBP15.32■□□□□ 0.04
TUBGCP4-211ENST00000566251 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
TUBGCP4-211ENST00000566251 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
TUBGCP4-211ENST00000566251 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
TUBGCP4-211ENST00000566251 IQGAP2Q13576 1575 aa15.29■□□□□ 0.04
TUBGCP4-211ENST00000566251 P3H3Q8IVL6 736 aa15.29■□□□□ 0.04
TUBGCP4-211ENST00000566251 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
TUBGCP4-211ENST00000566251 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
TUBGCP4-211ENST00000566251 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
TUBGCP4-211ENST00000566251 FMN1Q68DA7 1419 aa15.27■□□□□ 0.04
TUBGCP4-211ENST00000566251 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
TUBGCP4-211ENST00000566251 NUP160Q12769 1436 aa15.24■□□□□ 0.03
TUBGCP4-211ENST00000566251 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
TUBGCP4-211ENST00000566251 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
TUBGCP4-211ENST00000566251 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
TUBGCP4-211ENST00000566251 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
TUBGCP4-211ENST00000566251 CARMIL2Q6F5E8 1435 aa15.21■□□□□ 0.03
TUBGCP4-211ENST00000566251 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
TUBGCP4-211ENST00000566251 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
TUBGCP4-211ENST00000566251 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
TUBGCP4-211ENST00000566251 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
TUBGCP4-211ENST00000566251 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
TUBGCP4-211ENST00000566251 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
TUBGCP4-211ENST00000566251 FYCO1Q9BQS8 1478 aa15.16■□□□□ 0.02
TUBGCP4-211ENST00000566251 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
TUBGCP4-211ENST00000566251 CHD1O14646 1710 aa15.12■□□□□ 0.01
TUBGCP4-211ENST00000566251 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
TUBGCP4-211ENST00000566251 DISP1Q96F81 1524 aa15.11■□□□□ 0.01
TUBGCP4-211ENST00000566251 KIAA0556O60303 1618 aa15.1■□□□□ 0.01
TUBGCP4-211ENST00000566251 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
TUBGCP4-211ENST00000566251 PCF11O94913 1555 aaKnown RBP15.08■□□□□ 0
TUBGCP4-211ENST00000566251 TIAM1Q13009 1591 aa15.08■□□□□ 0
TUBGCP4-211ENST00000566251 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
TUBGCP4-211ENST00000566251 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
TUBGCP4-211ENST00000566251 KANK4Q5T7N3 995 aaPredicted RBP15.07■□□□□ 0
TUBGCP4-211ENST00000566251 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
TUBGCP4-211ENST00000566251 CCDC18Q5T9S5 1454 aa15.06■□□□□ 0
TUBGCP4-211ENST00000566251 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
TUBGCP4-211ENST00000566251 HECW1Q76N89 1606 aa15.05■□□□□ -0
TUBGCP4-211ENST00000566251 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
TUBGCP4-211ENST00000566251 PTPRGP23470 1445 aa15.02■□□□□ -0
TUBGCP4-211ENST00000566251 MTUS2Q5JR59 1369 aa15.02■□□□□ -0
TUBGCP4-211ENST00000566251 CFAP43Q8NDM7 1665 aa15.01□□□□□ -0.01
TUBGCP4-211ENST00000566251 MSH5O43196 834 aa15□□□□□ -0.01
TUBGCP4-211ENST00000566251 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
TUBGCP4-211ENST00000566251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
TUBGCP4-211ENST00000566251 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
TUBGCP4-211ENST00000566251 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
TUBGCP4-211ENST00000566251 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
TUBGCP4-211ENST00000566251 RAPGEF6Q8TEU7 1601 aa14.97□□□□□ -0.01
TUBGCP4-211ENST00000566251 EHBP1L1Q8N3D4 1523 aa14.93□□□□□ -0.02
TUBGCP4-211ENST00000566251 PLEKHD1A6NEE1 506 aa14.92□□□□□ -0.02
TUBGCP4-211ENST00000566251 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
TUBGCP4-211ENST00000566251 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
TUBGCP4-211ENST00000566251 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
TUBGCP4-211ENST00000566251 CCNB3Q8WWL7 1395 aa14.91□□□□□ -0.02
TUBGCP4-211ENST00000566251 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
TUBGCP4-211ENST00000566251 ABCA8O94911 1581 aa14.9□□□□□ -0.02
TUBGCP4-211ENST00000566251 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
TUBGCP4-211ENST00000566251 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
TUBGCP4-211ENST00000566251 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
TUBGCP4-211ENST00000566251 PHLDB1Q86UU1 1377 aa14.86□□□□□ -0.03
TUBGCP4-211ENST00000566251 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
TUBGCP4-211ENST00000566251 NCOA2Q15596 1464 aa14.86□□□□□ -0.03
TUBGCP4-211ENST00000566251 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
TUBGCP4-211ENST00000566251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
TUBGCP4-211ENST00000566251 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
TUBGCP4-211ENST00000566251 TROQ12816 1431 aaPredicted RBP14.84□□□□□ -0.03
TUBGCP4-211ENST00000566251 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
TUBGCP4-211ENST00000566251 ATP10BO94823 1461 aa14.83□□□□□ -0.03
TUBGCP4-211ENST00000566251 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
TUBGCP4-211ENST00000566251 UHRF1BP1LA0JNW5 1464 aa14.82□□□□□ -0.04
TUBGCP4-211ENST00000566251 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms