RNA–Protein interactions for RNA: ENST00000564626.1

POLR2C-206, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 518 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-206ENST00000564626 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
POLR2C-206ENST00000564626 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
POLR2C-206ENST00000564626 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
POLR2C-206ENST00000564626 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
POLR2C-206ENST00000564626 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
POLR2C-206ENST00000564626 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
POLR2C-206ENST00000564626 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
POLR2C-206ENST00000564626 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
POLR2C-206ENST00000564626 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
POLR2C-206ENST00000564626 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
POLR2C-206ENST00000564626 ABCC8Q09428 1581 aa15.02■□□□□ -0
POLR2C-206ENST00000564626 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -01e-8■■■□□ 17.2
POLR2C-206ENST00000564626 DNMBPQ6XZF7 1577 aa15.01□□□□□ -0.01
POLR2C-206ENST00000564626 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
POLR2C-206ENST00000564626 TARBP1Q13395 1621 aaKnown RBP14.95□□□□□ -0.02
POLR2C-206ENST00000564626 CHD1O14646 1710 aa14.95□□□□□ -0.02
POLR2C-206ENST00000564626 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
POLR2C-206ENST00000564626 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
POLR2C-206ENST00000564626 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
POLR2C-206ENST00000564626 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
POLR2C-206ENST00000564626 RAD54L2Q9Y4B4 1467 aa14.92□□□□□ -0.02
POLR2C-206ENST00000564626 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
POLR2C-206ENST00000564626 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
POLR2C-206ENST00000564626 SOGA1O94964 1423 aa14.88□□□□□ -0.03
POLR2C-206ENST00000564626 SNAPC4Q5SXM2 1469 aa14.86□□□□□ -0.03
POLR2C-206ENST00000564626 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
POLR2C-206ENST00000564626 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
POLR2C-206ENST00000564626 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
POLR2C-206ENST00000564626 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
POLR2C-206ENST00000564626 CLASP1Q7Z460 1538 aa14.81□□□□□ -0.04
POLR2C-206ENST00000564626 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
POLR2C-206ENST00000564626 PROM2Q8N271 834 aa14.78□□□□□ -0.04
POLR2C-206ENST00000564626 MAGI1Q96QZ7 1491 aaPredicted RBP14.77□□□□□ -0.04
POLR2C-206ENST00000564626 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
POLR2C-206ENST00000564626 CUX1P39880 1505 aa14.76□□□□□ -0.05
POLR2C-206ENST00000564626 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
POLR2C-206ENST00000564626 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
POLR2C-206ENST00000564626 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
POLR2C-206ENST00000564626 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
POLR2C-206ENST00000564626 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
POLR2C-206ENST00000564626 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
POLR2C-206ENST00000564626 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
POLR2C-206ENST00000564626 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
POLR2C-206ENST00000564626 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
POLR2C-206ENST00000564626 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
POLR2C-206ENST00000564626 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
POLR2C-206ENST00000564626 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
POLR2C-206ENST00000564626 CEP170Q5SW79 1584 aa14.53□□□□□ -0.08
POLR2C-206ENST00000564626 NUP160Q12769 1436 aa14.53□□□□□ -0.08
POLR2C-206ENST00000564626 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
POLR2C-206ENST00000564626 SUPT5HO00267 1087 aaKnown RBP14.5□□□□□ -0.09
POLR2C-206ENST00000564626 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
POLR2C-206ENST00000564626 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
POLR2C-206ENST00000564626 SHROOM2Q13796 1616 aa14.45□□□□□ -0.1
POLR2C-206ENST00000564626 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
POLR2C-206ENST00000564626 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
POLR2C-206ENST00000564626 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
POLR2C-206ENST00000564626 PRG4Q92954 1404 aaPredicted RBP14.43□□□□□ -0.1
POLR2C-206ENST00000564626 ERICH3Q5RHP9 1530 aa14.42□□□□□ -0.1
POLR2C-206ENST00000564626 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
POLR2C-206ENST00000564626 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
POLR2C-206ENST00000564626 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
POLR2C-206ENST00000564626 JPH4Q96JJ6 628 aa14.41□□□□□ -0.1
POLR2C-206ENST00000564626 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
POLR2C-206ENST00000564626 POTEHQ6S545 545 aa14.38□□□□□ -0.11
POLR2C-206ENST00000564626 KIF13AQ9H1H9 1805 aa14.37□□□□□ -0.11
POLR2C-206ENST00000564626 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
POLR2C-206ENST00000564626 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
POLR2C-206ENST00000564626 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
POLR2C-206ENST00000564626 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
POLR2C-206ENST00000564626 MAPKBP1O60336 1514 aa14.29□□□□□ -0.12
POLR2C-206ENST00000564626 PLCD3Q8N3E9 789 aa14.28□□□□□ -0.12
POLR2C-206ENST00000564626 ADCY10Q96PN6 1610 aa14.27□□□□□ -0.12
POLR2C-206ENST00000564626 DIP2BQ9P265 1576 aa14.27□□□□□ -0.12
POLR2C-206ENST00000564626 MIER1Q8N108 512 aa14.27□□□□□ -0.13
POLR2C-206ENST00000564626 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
POLR2C-206ENST00000564626 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
POLR2C-206ENST00000564626 KIAA0586Q9BVV6 1533 aa14.23□□□□□ -0.13
POLR2C-206ENST00000564626 KDM6BO15054 1643 aa14.22□□□□□ -0.13
POLR2C-206ENST00000564626 IGF1RP08069 1367 aa14.22□□□□□ -0.13
POLR2C-206ENST00000564626 TTBK1Q5TCY1 1321 aaPredicted RBP14.2□□□□□ -0.14
POLR2C-206ENST00000564626 CHRDL2Q6WN34 429 aa14.2□□□□□ -0.14
POLR2C-206ENST00000564626 KIF27Q86VH2 1401 aa14.18□□□□□ -0.14
POLR2C-206ENST00000564626 PTPRGP23470 1445 aa14.17□□□□□ -0.14
POLR2C-206ENST00000564626 TSPOAP1O95153 1857 aa14.17□□□□□ -0.14
POLR2C-206ENST00000564626 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
POLR2C-206ENST00000564626 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
POLR2C-206ENST00000564626 CUL7Q14999 1698 aa14.14□□□□□ -0.15
POLR2C-206ENST00000564626 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
POLR2C-206ENST00000564626 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
POLR2C-206ENST00000564626 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
POLR2C-206ENST00000564626 ABCC2Q92887 1545 aa14.11□□□□□ -0.15
POLR2C-206ENST00000564626 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
POLR2C-206ENST00000564626 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
POLR2C-206ENST00000564626 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
POLR2C-206ENST00000564626 PLB1Q6P1J6 1458 aa14.08□□□□□ -0.16
POLR2C-206ENST00000564626 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
POLR2C-206ENST00000564626 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
POLR2C-206ENST00000564626 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
POLR2C-206ENST00000564626 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms