RNA–Protein interactions for RNA: ENST00000564086.5

SNUPN-204, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-204ENST00000564086 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
SNUPN-204ENST00000564086 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
SNUPN-204ENST00000564086 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
SNUPN-204ENST00000564086 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
SNUPN-204ENST00000564086 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
SNUPN-204ENST00000564086 FKBP8Q14318 412 aa13.73□□□□□ -0.21
SNUPN-204ENST00000564086 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
SNUPN-204ENST00000564086 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
SNUPN-204ENST00000564086 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
SNUPN-204ENST00000564086 CFTRP13569 1480 aa13.68□□□□□ -0.22
SNUPN-204ENST00000564086 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
SNUPN-204ENST00000564086 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
SNUPN-204ENST00000564086 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
SNUPN-204ENST00000564086 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
SNUPN-204ENST00000564086 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
SNUPN-204ENST00000564086 POTEHQ6S545 545 aa13.54□□□□□ -0.24
SNUPN-204ENST00000564086 PROM2Q8N271 834 aa13.53□□□□□ -0.24
SNUPN-204ENST00000564086 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
SNUPN-204ENST00000564086 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
SNUPN-204ENST00000564086 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNUPN-204ENST00000564086 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
SNUPN-204ENST00000564086 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
SNUPN-204ENST00000564086 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
SNUPN-204ENST00000564086 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
SNUPN-204ENST00000564086 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
SNUPN-204ENST00000564086 EIF4G3O43432 1585 aaKnown RBP13.44□□□□□ -0.26
SNUPN-204ENST00000564086 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
SNUPN-204ENST00000564086 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
SNUPN-204ENST00000564086 CHD1O14646 1710 aa13.39□□□□□ -0.27
SNUPN-204ENST00000564086 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
SNUPN-204ENST00000564086 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
SNUPN-204ENST00000564086 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.27
SNUPN-204ENST00000564086 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
SNUPN-204ENST00000564086 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
SNUPN-204ENST00000564086 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
SNUPN-204ENST00000564086 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
SNUPN-204ENST00000564086 RAD54L2Q9Y4B4 1467 aa13.32□□□□□ -0.28
SNUPN-204ENST00000564086 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
SNUPN-204ENST00000564086 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
SNUPN-204ENST00000564086 CYB5RLQ6IPT4 315 aa13.26□□□□□ -0.29
SNUPN-204ENST00000564086 MIER1Q8N108 512 aa13.26□□□□□ -0.29
SNUPN-204ENST00000564086 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
SNUPN-204ENST00000564086 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
SNUPN-204ENST00000564086 SOGA1O94964 1423 aa13.25□□□□□ -0.29
SNUPN-204ENST00000564086 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
SNUPN-204ENST00000564086 CUX1P39880 1505 aa13.24□□□□□ -0.29
SNUPN-204ENST00000564086 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
SNUPN-204ENST00000564086 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
SNUPN-204ENST00000564086 HAX1O00165 279 aa13.21□□□□□ -0.29
SNUPN-204ENST00000564086 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
SNUPN-204ENST00000564086 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
SNUPN-204ENST00000564086 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
SNUPN-204ENST00000564086 PBRM1Q86U86 1689 aa13.16□□□□□ -0.3
SNUPN-204ENST00000564086 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNUPN-204ENST00000564086 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
SNUPN-204ENST00000564086 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
SNUPN-204ENST00000564086 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
SNUPN-204ENST00000564086 CHMP7Q8WUX9 453 aaPredicted RBP13.13□□□□□ -0.31
SNUPN-204ENST00000564086 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
SNUPN-204ENST00000564086 SUPT5HO00267 1087 aaKnown RBP13.11□□□□□ -0.31
SNUPN-204ENST00000564086 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
SNUPN-204ENST00000564086 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
SNUPN-204ENST00000564086 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
SNUPN-204ENST00000564086 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
SNUPN-204ENST00000564086 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
SNUPN-204ENST00000564086 ERCC6L2Q5T890 1561 aa13.04□□□□□ -0.32
SNUPN-204ENST00000564086 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
SNUPN-204ENST00000564086 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
SNUPN-204ENST00000564086 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
SNUPN-204ENST00000564086 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
SNUPN-204ENST00000564086 PAK3O75914 559 aaPredicted RBP13.02□□□□□ -0.33
SNUPN-204ENST00000564086 ADAMTS12P58397 1594 aa13□□□□□ -0.33
SNUPN-204ENST00000564086 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
SNUPN-204ENST00000564086 CEP170Q5SW79 1584 aa12.99□□□□□ -0.33
SNUPN-204ENST00000564086 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
SNUPN-204ENST00000564086 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
SNUPN-204ENST00000564086 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
SNUPN-204ENST00000564086 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
SNUPN-204ENST00000564086 EVX2Q03828 476 aa12.93□□□□□ -0.34
SNUPN-204ENST00000564086 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
SNUPN-204ENST00000564086 NUP160Q12769 1436 aa12.92□□□□□ -0.34
SNUPN-204ENST00000564086 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
SNUPN-204ENST00000564086 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
SNUPN-204ENST00000564086 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
SNUPN-204ENST00000564086 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
SNUPN-204ENST00000564086 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
SNUPN-204ENST00000564086 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
SNUPN-204ENST00000564086 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
SNUPN-204ENST00000564086 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.35
SNUPN-204ENST00000564086 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
SNUPN-204ENST00000564086 NUBP1P53384 320 aa12.83□□□□□ -0.36
SNUPN-204ENST00000564086 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
SNUPN-204ENST00000564086 RUSC2Q8N2Y8 1516 aa12.83□□□□□ -0.36
SNUPN-204ENST00000564086 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
SNUPN-204ENST00000564086 CLCN6P51797 869 aa12.79□□□□□ -0.36
SNUPN-204ENST00000564086 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
SNUPN-204ENST00000564086 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
SNUPN-204ENST00000564086 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
SNUPN-204ENST00000564086 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
SNUPN-204ENST00000564086 GABBR2O75899 941 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms