RNA–Protein interactions for RNA: ENST00000563642.6

CLCN7-205, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 2

Gene CLCN7, Length 4,184 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-205ENST00000563642 IRX6P78412 446 aaPredicted RBP19.12■□□□□ 0.65
CLCN7-205ENST00000563642 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
CLCN7-205ENST00000563642 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.65
CLCN7-205ENST00000563642 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.64
CLCN7-205ENST00000563642 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
CLCN7-205ENST00000563642 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
CLCN7-205ENST00000563642 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
CLCN7-205ENST00000563642 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
CLCN7-205ENST00000563642 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
CLCN7-205ENST00000563642 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
CLCN7-205ENST00000563642 ZNF777Q9ULD5 760 aaPredicted RBP19.03■□□□□ 0.64
CLCN7-205ENST00000563642 NESP48681 1621 aa19.02■□□□□ 0.64
CLCN7-205ENST00000563642 ANO8Q9HCE9 1232 aaPredicted RBP19.01■□□□□ 0.63
CLCN7-205ENST00000563642 RTN4Q9NQC3 1192 aaKnown RBP19.01■□□□□ 0.63
CLCN7-205ENST00000563642 CFTRP13569 1480 aa19.01■□□□□ 0.63
CLCN7-205ENST00000563642 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
CLCN7-205ENST00000563642 EIF5BO60841 1220 aaKnown RBP19■□□□□ 0.63
CLCN7-205ENST00000563642 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
CLCN7-205ENST00000563642 CHIC2Q9UKJ5 165 aa18.98■□□□□ 0.63
CLCN7-205ENST00000563642 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
CLCN7-205ENST00000563642 MSH5O43196 834 aa18.97■□□□□ 0.63
CLCN7-205ENST00000563642 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLCN7-205ENST00000563642 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
CLCN7-205ENST00000563642 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
CLCN7-205ENST00000563642 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
CLCN7-205ENST00000563642 ANP32AP39687 249 aaKnown RBP18.94■□□□□ 0.62
CLCN7-205ENST00000563642 CCDC136Q96JN2 1154 aa18.94■□□□□ 0.62
CLCN7-205ENST00000563642 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
CLCN7-205ENST00000563642 IGF1RP08069 1367 aa18.92■□□□□ 0.62
CLCN7-205ENST00000563642 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
CLCN7-205ENST00000563642 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
CLCN7-205ENST00000563642 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.88■□□□□ 0.61
CLCN7-205ENST00000563642 CUX1P39880 1505 aa18.87■□□□□ 0.61
CLCN7-205ENST00000563642 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
CLCN7-205ENST00000563642 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
CLCN7-205ENST00000563642 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
CLCN7-205ENST00000563642 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
CLCN7-205ENST00000563642 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
CLCN7-205ENST00000563642 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
CLCN7-205ENST00000563642 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
CLCN7-205ENST00000563642 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
CLCN7-205ENST00000563642 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
CLCN7-205ENST00000563642 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
CLCN7-205ENST00000563642 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.59
CLCN7-205ENST00000563642 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
CLCN7-205ENST00000563642 CCNB3Q8WWL7 1395 aa18.76■□□□□ 0.59
CLCN7-205ENST00000563642 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
CLCN7-205ENST00000563642 CCER2I3L3R5 266 aa18.71■□□□□ 0.58
CLCN7-205ENST00000563642 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.587e-7■■■■□ 21.3
CLCN7-205ENST00000563642 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
CLCN7-205ENST00000563642 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
CLCN7-205ENST00000563642 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
CLCN7-205ENST00000563642 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
CLCN7-205ENST00000563642 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
CLCN7-205ENST00000563642 KIF21BO75037 1637 aa18.66■□□□□ 0.58
CLCN7-205ENST00000563642 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
CLCN7-205ENST00000563642 FAM9BQ8IZU0 186 aa18.64■□□□□ 0.57
CLCN7-205ENST00000563642 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
CLCN7-205ENST00000563642 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
CLCN7-205ENST00000563642 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
CLCN7-205ENST00000563642 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
CLCN7-205ENST00000563642 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
CLCN7-205ENST00000563642 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
CLCN7-205ENST00000563642 NEFMP07197 916 aa18.59■□□□□ 0.57
CLCN7-205ENST00000563642 TSPY4P0CV99 314 aa18.58■□□□□ 0.57
CLCN7-205ENST00000563642 TSPY10P0CW01 314 aa18.58■□□□□ 0.57
CLCN7-205ENST00000563642 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
CLCN7-205ENST00000563642 JPH4Q96JJ6 628 aa18.56■□□□□ 0.56
CLCN7-205ENST00000563642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLCN7-205ENST00000563642 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
CLCN7-205ENST00000563642 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
CLCN7-205ENST00000563642 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
CLCN7-205ENST00000563642 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.55
CLCN7-205ENST00000563642 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
CLCN7-205ENST00000563642 NPM1P06748 294 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLCN7-205ENST00000563642 GLIPR1L2Q4G1C9 344 aa18.49■□□□□ 0.55
CLCN7-205ENST00000563642 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
CLCN7-205ENST00000563642 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
CLCN7-205ENST00000563642 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
CLCN7-205ENST00000563642 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.55
CLCN7-205ENST00000563642 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.54
CLCN7-205ENST00000563642 SETD5Q9C0A6 1442 aa18.45■□□□□ 0.54
CLCN7-205ENST00000563642 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
CLCN7-205ENST00000563642 CARMIL2Q6F5E8 1435 aa18.44■□□□□ 0.54
CLCN7-205ENST00000563642 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
CLCN7-205ENST00000563642 ABCA10Q8WWZ4 1543 aa18.42■□□□□ 0.54
CLCN7-205ENST00000563642 PPM1GO15355 546 aaPredicted RBP18.42■□□□□ 0.54
CLCN7-205ENST00000563642 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
CLCN7-205ENST00000563642 UBE2Q2Q8WVN8 375 aa18.41■□□□□ 0.54
CLCN7-205ENST00000563642 FOXD1Q16676 465 aa18.41■□□□□ 0.54
CLCN7-205ENST00000563642 PHLDB1Q86UU1 1377 aa18.4■□□□□ 0.54
CLCN7-205ENST00000563642 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
CLCN7-205ENST00000563642 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
CLCN7-205ENST00000563642 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
CLCN7-205ENST00000563642 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
CLCN7-205ENST00000563642 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
CLCN7-205ENST00000563642 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
CLCN7-205ENST00000563642 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
CLCN7-205ENST00000563642 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
CLCN7-205ENST00000563642 ZNF644Q9H582 1327 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms