RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
CHRFAM7A-204ENST00000562729 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
CHRFAM7A-204ENST00000562729 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
CHRFAM7A-204ENST00000562729 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
CHRFAM7A-204ENST00000562729 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
CHRFAM7A-204ENST00000562729 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
CHRFAM7A-204ENST00000562729 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
CHRFAM7A-204ENST00000562729 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
CHRFAM7A-204ENST00000562729 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
CHRFAM7A-204ENST00000562729 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
CHRFAM7A-204ENST00000562729 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
CHRFAM7A-204ENST00000562729 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
CHRFAM7A-204ENST00000562729 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
CHRFAM7A-204ENST00000562729 GRIN2AQ12879 1464 aa16■□□□□ 0.15
CHRFAM7A-204ENST00000562729 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
CHRFAM7A-204ENST00000562729 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
CHRFAM7A-204ENST00000562729 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
CHRFAM7A-204ENST00000562729 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
CHRFAM7A-204ENST00000562729 NUP160Q12769 1436 aa15.89■□□□□ 0.13
CHRFAM7A-204ENST00000562729 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
CHRFAM7A-204ENST00000562729 CUL7Q14999 1698 aa15.86■□□□□ 0.13
CHRFAM7A-204ENST00000562729 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
CHRFAM7A-204ENST00000562729 IGF1RP08069 1367 aa15.82■□□□□ 0.12
CHRFAM7A-204ENST00000562729 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
CHRFAM7A-204ENST00000562729 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
CHRFAM7A-204ENST00000562729 JPH4Q96JJ6 628 aa15.79■□□□□ 0.12
CHRFAM7A-204ENST00000562729 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
CHRFAM7A-204ENST00000562729 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-204ENST00000562729 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
CHRFAM7A-204ENST00000562729 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
CHRFAM7A-204ENST00000562729 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
CHRFAM7A-204ENST00000562729 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-204ENST00000562729 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHRFAM7A-204ENST00000562729 DSG3P32926 999 aa15.67■□□□□ 0.1
CHRFAM7A-204ENST00000562729 RAPGEF2Q9Y4G8 1499 aa15.66■□□□□ 0.1
CHRFAM7A-204ENST00000562729 CAPN15O75808 1086 aa15.66■□□□□ 0.1
CHRFAM7A-204ENST00000562729 KCNA4P22459 653 aa15.65■□□□□ 0.1
CHRFAM7A-204ENST00000562729 CARMIL2Q6F5E8 1435 aa15.65■□□□□ 0.1
CHRFAM7A-204ENST00000562729 IQGAP2Q13576 1575 aa15.65■□□□□ 0.1
CHRFAM7A-204ENST00000562729 PTPRGP23470 1445 aa15.59■□□□□ 0.09
CHRFAM7A-204ENST00000562729 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
CHRFAM7A-204ENST00000562729 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
CHRFAM7A-204ENST00000562729 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
CHRFAM7A-204ENST00000562729 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
CHRFAM7A-204ENST00000562729 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-204ENST00000562729 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
CHRFAM7A-204ENST00000562729 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
CHRFAM7A-204ENST00000562729 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
CHRFAM7A-204ENST00000562729 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
CHRFAM7A-204ENST00000562729 EEA1Q15075 1411 aa15.49■□□□□ 0.07
CHRFAM7A-204ENST00000562729 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
CHRFAM7A-204ENST00000562729 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
CHRFAM7A-204ENST00000562729 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
CHRFAM7A-204ENST00000562729 KIAA0556O60303 1618 aa15.48■□□□□ 0.07
CHRFAM7A-204ENST00000562729 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
CHRFAM7A-204ENST00000562729 UACAQ9BZF9 1416 aa15.45■□□□□ 0.06
CHRFAM7A-204ENST00000562729 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
CHRFAM7A-204ENST00000562729 ABCC10Q5T3U5 1492 aa15.44■□□□□ 0.06
CHRFAM7A-204ENST00000562729 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
CHRFAM7A-204ENST00000562729 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-204ENST00000562729 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
CHRFAM7A-204ENST00000562729 POTEHQ6S545 545 aa15.4■□□□□ 0.06
CHRFAM7A-204ENST00000562729 P3H3Q8IVL6 736 aa15.39■□□□□ 0.05
CHRFAM7A-204ENST00000562729 ASXL2Q76L83 1435 aa15.38■□□□□ 0.05
CHRFAM7A-204ENST00000562729 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
CHRFAM7A-204ENST00000562729 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
CHRFAM7A-204ENST00000562729 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
CHRFAM7A-204ENST00000562729 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
CHRFAM7A-204ENST00000562729 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.05
CHRFAM7A-204ENST00000562729 KIF21BO75037 1637 aa15.32■□□□□ 0.04
CHRFAM7A-204ENST00000562729 APLP2Q06481 763 aa15.32■□□□□ 0.04
CHRFAM7A-204ENST00000562729 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
CHRFAM7A-204ENST00000562729 ARID3CA6NKF2 412 aa15.3■□□□□ 0.04
CHRFAM7A-204ENST00000562729 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-204ENST00000562729 ABCB7O75027 752 aa15.29■□□□□ 0.04
CHRFAM7A-204ENST00000562729 KDM6BO15054 1643 aa15.28■□□□□ 0.04
CHRFAM7A-204ENST00000562729 ABCA8O94911 1581 aa15.28■□□□□ 0.04
CHRFAM7A-204ENST00000562729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
CHRFAM7A-204ENST00000562729 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
CHRFAM7A-204ENST00000562729 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
CHRFAM7A-204ENST00000562729 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
CHRFAM7A-204ENST00000562729 GLI2P10070 1586 aa15.27■□□□□ 0.03
CHRFAM7A-204ENST00000562729 WDR7Q9Y4E6 1490 aa15.27■□□□□ 0.03
CHRFAM7A-204ENST00000562729 EPRSP07814 1512 aaKnown RBP15.26■□□□□ 0.03
CHRFAM7A-204ENST00000562729 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
CHRFAM7A-204ENST00000562729 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
CHRFAM7A-204ENST00000562729 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
CHRFAM7A-204ENST00000562729 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
CHRFAM7A-204ENST00000562729 MAP3K4Q9Y6R4 1608 aa15.21■□□□□ 0.03
CHRFAM7A-204ENST00000562729 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
CHRFAM7A-204ENST00000562729 ATP10BO94823 1461 aa15.18■□□□□ 0.02
CHRFAM7A-204ENST00000562729 PPRC1Q5VV67 1664 aaKnown RBP15.18■□□□□ 0.02
CHRFAM7A-204ENST00000562729 CD109Q6YHK3 1445 aa15.17■□□□□ 0.02
CHRFAM7A-204ENST00000562729 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
CHRFAM7A-204ENST00000562729 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
CHRFAM7A-204ENST00000562729 NUP153P49790 1475 aaKnown RBP15.13■□□□□ 0.01
CHRFAM7A-204ENST00000562729 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
CHRFAM7A-204ENST00000562729 FMN1Q68DA7 1419 aa15.11■□□□□ 0.01
CHRFAM7A-204ENST00000562729 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
CHRFAM7A-204ENST00000562729 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms