RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 MYCNP04198 464 aaPredicted RBP12.54□□□□□ -0.4
ZEB1-221ENST00000561061 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
ZEB1-221ENST00000561061 SNAPC4Q5SXM2 1469 aa12.51□□□□□ -0.41
ZEB1-221ENST00000561061 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
ZEB1-221ENST00000561061 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
ZEB1-221ENST00000561061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
ZEB1-221ENST00000561061 FBLN2P98095 1184 aa12.48□□□□□ -0.41
ZEB1-221ENST00000561061 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
ZEB1-221ENST00000561061 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-221ENST00000561061 CAPN15O75808 1086 aa12.47□□□□□ -0.41
ZEB1-221ENST00000561061 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-221ENST00000561061 CUX1P39880 1505 aa12.47□□□□□ -0.41
ZEB1-221ENST00000561061 SOGA1O94964 1423 aa12.46□□□□□ -0.41
ZEB1-221ENST00000561061 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.41
ZEB1-221ENST00000561061 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
ZEB1-221ENST00000561061 SYNJ2O15056 1496 aa12.42□□□□□ -0.42
ZEB1-221ENST00000561061 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
ZEB1-221ENST00000561061 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
ZEB1-221ENST00000561061 APLP2Q06481 763 aa12.39□□□□□ -0.43
ZEB1-221ENST00000561061 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
ZEB1-221ENST00000561061 KIF13AQ9H1H9 1805 aa12.36□□□□□ -0.43
ZEB1-221ENST00000561061 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
ZEB1-221ENST00000561061 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
ZEB1-221ENST00000561061 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
ZEB1-221ENST00000561061 DSG3P32926 999 aa12.33□□□□□ -0.44
ZEB1-221ENST00000561061 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
ZEB1-221ENST00000561061 ERCC6L2Q5T890 1561 aa12.33□□□□□ -0.44
ZEB1-221ENST00000561061 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
ZEB1-221ENST00000561061 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
ZEB1-221ENST00000561061 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
ZEB1-221ENST00000561061 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
ZEB1-221ENST00000561061 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
ZEB1-221ENST00000561061 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
ZEB1-221ENST00000561061 GRIN2AQ12879 1464 aa12.28□□□□□ -0.44
ZEB1-221ENST00000561061 ABCB7O75027 752 aa12.26□□□□□ -0.45
ZEB1-221ENST00000561061 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
ZEB1-221ENST00000561061 NUP160Q12769 1436 aa12.24□□□□□ -0.45
ZEB1-221ENST00000561061 ERICH3Q5RHP9 1530 aa12.19□□□□□ -0.46
ZEB1-221ENST00000561061 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
ZEB1-221ENST00000561061 FHAD1B1AJZ9 1412 aa12.17□□□□□ -0.46
ZEB1-221ENST00000561061 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
ZEB1-221ENST00000561061 TSPOAP1O95153 1857 aa12.15□□□□□ -0.46
ZEB1-221ENST00000561061 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
ZEB1-221ENST00000561061 DIP2BQ9P265 1576 aa12.12□□□□□ -0.47
ZEB1-221ENST00000561061 ADCY10Q96PN6 1610 aa12.11□□□□□ -0.47
ZEB1-221ENST00000561061 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
ZEB1-221ENST00000561061 POLA2Q14181 598 aa12.1□□□□□ -0.47
ZEB1-221ENST00000561061 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
ZEB1-221ENST00000561061 ABCC10Q5T3U5 1492 aa12.06□□□□□ -0.48
ZEB1-221ENST00000561061 KDM6BO15054 1643 aa12.05□□□□□ -0.48
ZEB1-221ENST00000561061 CUL7Q14999 1698 aa12.05□□□□□ -0.48
ZEB1-221ENST00000561061 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
ZEB1-221ENST00000561061 JPH4Q96JJ6 628 aa12.01□□□□□ -0.49
ZEB1-221ENST00000561061 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
ZEB1-221ENST00000561061 FAM69CQ0P6D2 419 aa11.98□□□□□ -0.49
ZEB1-221ENST00000561061 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
ZEB1-221ENST00000561061 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
ZEB1-221ENST00000561061 GLI2P10070 1586 aa11.91□□□□□ -0.5
ZEB1-221ENST00000561061 KDM4FA0A1W2PPD8 638 aa11.9□□□□□ -0.5
ZEB1-221ENST00000561061 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
ZEB1-221ENST00000561061 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
ZEB1-221ENST00000561061 ABCC2Q92887 1545 aa11.89□□□□□ -0.51
ZEB1-221ENST00000561061 IGF1RP08069 1367 aa11.89□□□□□ -0.51
ZEB1-221ENST00000561061 MAP3K4Q9Y6R4 1608 aa11.89□□□□□ -0.51
ZEB1-221ENST00000561061 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
ZEB1-221ENST00000561061 PTPRGP23470 1445 aa11.86□□□□□ -0.51
ZEB1-221ENST00000561061 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
ZEB1-221ENST00000561061 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
ZEB1-221ENST00000561061 UHRF1BP1LA0JNW5 1464 aa11.84□□□□□ -0.51
ZEB1-221ENST00000561061 PLB1Q6P1J6 1458 aa11.84□□□□□ -0.51
ZEB1-221ENST00000561061 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
ZEB1-221ENST00000561061 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
ZEB1-221ENST00000561061 CARMIL2Q6F5E8 1435 aa11.83□□□□□ -0.52
ZEB1-221ENST00000561061 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
ZEB1-221ENST00000561061 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
ZEB1-221ENST00000561061 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
ZEB1-221ENST00000561061 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
ZEB1-221ENST00000561061 EPRSP07814 1512 aaKnown RBP11.8□□□□□ -0.52
ZEB1-221ENST00000561061 KDM5BQ9UGL1 1544 aa11.8□□□□□ -0.52
ZEB1-221ENST00000561061 CFAP43Q8NDM7 1665 aa11.79□□□□□ -0.52
ZEB1-221ENST00000561061 UGGT2Q9NYU1 1516 aa11.79□□□□□ -0.52
ZEB1-221ENST00000561061 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
ZEB1-221ENST00000561061 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
ZEB1-221ENST00000561061 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
ZEB1-221ENST00000561061 COL17A1Q9UMD9 1497 aaPredicted RBP11.77□□□□□ -0.52
ZEB1-221ENST00000561061 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
ZEB1-221ENST00000561061 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
ZEB1-221ENST00000561061 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
ZEB1-221ENST00000561061 KIF21BO75037 1637 aa11.73□□□□□ -0.53
ZEB1-221ENST00000561061 WDR7Q9Y4E6 1490 aa11.72□□□□□ -0.53
ZEB1-221ENST00000561061 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
ZEB1-221ENST00000561061 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
ZEB1-221ENST00000561061 ABCA8O94911 1581 aa11.69□□□□□ -0.54
ZEB1-221ENST00000561061 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
ZEB1-221ENST00000561061 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
ZEB1-221ENST00000561061 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
ZEB1-221ENST00000561061 CD109Q6YHK3 1445 aa11.62□□□□□ -0.55
ZEB1-221ENST00000561061 ABCA9Q8IUA7 1624 aa11.61□□□□□ -0.55
ZEB1-221ENST00000561061 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
ZEB1-221ENST00000561061 ARAP3Q8WWN8 1544 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms