RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-211ENST00000561010 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
GABPB1-211ENST00000561010 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-211ENST00000561010 CUX1P39880 1505 aa13.23□□□□□ -0.29
GABPB1-211ENST00000561010 ARHGEF11O15085 1522 aa13.22□□□□□ -0.29
GABPB1-211ENST00000561010 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
GABPB1-211ENST00000561010 WDR97A6NE52 1622 aa13.21□□□□□ -0.29
GABPB1-211ENST00000561010 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-211ENST00000561010 PBRM1Q86U86 1689 aa13.19□□□□□ -0.3
GABPB1-211ENST00000561010 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
GABPB1-211ENST00000561010 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
GABPB1-211ENST00000561010 SOGA1O94964 1423 aa13.18□□□□□ -0.3
GABPB1-211ENST00000561010 FBLN2P98095 1184 aa13.17□□□□□ -0.3
GABPB1-211ENST00000561010 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
GABPB1-211ENST00000561010 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
GABPB1-211ENST00000561010 APLP2Q06481 763 aa13.1□□□□□ -0.31
GABPB1-211ENST00000561010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-211ENST00000561010 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
GABPB1-211ENST00000561010 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
GABPB1-211ENST00000561010 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.31
GABPB1-211ENST00000561010 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-211ENST00000561010 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
GABPB1-211ENST00000561010 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
GABPB1-211ENST00000561010 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
GABPB1-211ENST00000561010 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-211ENST00000561010 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
GABPB1-211ENST00000561010 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
GABPB1-211ENST00000561010 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-211ENST00000561010 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
GABPB1-211ENST00000561010 ABCA10Q8WWZ4 1543 aa13.02□□□□□ -0.33
GABPB1-211ENST00000561010 TOP2BQ02880 1626 aa13□□□□□ -0.33
GABPB1-211ENST00000561010 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
GABPB1-211ENST00000561010 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
GABPB1-211ENST00000561010 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
GABPB1-211ENST00000561010 POLA2Q14181 598 aa12.96□□□□□ -0.33
GABPB1-211ENST00000561010 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
GABPB1-211ENST00000561010 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
GABPB1-211ENST00000561010 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
GABPB1-211ENST00000561010 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
GABPB1-211ENST00000561010 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
GABPB1-211ENST00000561010 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-211ENST00000561010 SHROOM2Q13796 1616 aa12.88□□□□□ -0.35
GABPB1-211ENST00000561010 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
GABPB1-211ENST00000561010 NUP160Q12769 1436 aa12.85□□□□□ -0.35
GABPB1-211ENST00000561010 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
GABPB1-211ENST00000561010 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
GABPB1-211ENST00000561010 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
GABPB1-211ENST00000561010 PRG4Q92954 1404 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-211ENST00000561010 CUL7Q14999 1698 aa12.73□□□□□ -0.37
GABPB1-211ENST00000561010 TSPOAP1O95153 1857 aa12.7□□□□□ -0.38
GABPB1-211ENST00000561010 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
GABPB1-211ENST00000561010 ADCY10Q96PN6 1610 aa12.69□□□□□ -0.38
GABPB1-211ENST00000561010 IGF1RP08069 1367 aa12.67□□□□□ -0.38
GABPB1-211ENST00000561010 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
GABPB1-211ENST00000561010 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
GABPB1-211ENST00000561010 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
GABPB1-211ENST00000561010 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-211ENST00000561010 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-211ENST00000561010 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-211ENST00000561010 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
GABPB1-211ENST00000561010 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
GABPB1-211ENST00000561010 CARMIL1Q5VZK9 1371 aa12.59□□□□□ -0.39
GABPB1-211ENST00000561010 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
GABPB1-211ENST00000561010 MAPKBP1O60336 1514 aa12.57□□□□□ -0.4
GABPB1-211ENST00000561010 CTTNBP2Q8WZ74 1663 aa12.56□□□□□ -0.4
GABPB1-211ENST00000561010 ABCC10Q5T3U5 1492 aa12.55□□□□□ -0.4
GABPB1-211ENST00000561010 FAM69CQ0P6D2 419 aa12.54□□□□□ -0.4
GABPB1-211ENST00000561010 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
GABPB1-211ENST00000561010 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
GABPB1-211ENST00000561010 PPRC1Q5VV67 1664 aaKnown RBP12.51□□□□□ -0.41
GABPB1-211ENST00000561010 PTPRGP23470 1445 aa12.51□□□□□ -0.41
GABPB1-211ENST00000561010 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
GABPB1-211ENST00000561010 KDM6BO15054 1643 aa12.49□□□□□ -0.41
GABPB1-211ENST00000561010 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
GABPB1-211ENST00000561010 KIAA0556O60303 1618 aa12.48□□□□□ -0.41
GABPB1-211ENST00000561010 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
GABPB1-211ENST00000561010 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
GABPB1-211ENST00000561010 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
GABPB1-211ENST00000561010 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
GABPB1-211ENST00000561010 CARMIL2Q6F5E8 1435 aa12.47□□□□□ -0.41
GABPB1-211ENST00000561010 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.41
GABPB1-211ENST00000561010 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.42
GABPB1-211ENST00000561010 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
GABPB1-211ENST00000561010 EVX2Q03828 476 aa12.42□□□□□ -0.42
GABPB1-211ENST00000561010 UACAQ9BZF9 1416 aa12.42□□□□□ -0.42
GABPB1-211ENST00000561010 UHRF1BP1LA0JNW5 1464 aa12.41□□□□□ -0.42
GABPB1-211ENST00000561010 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
GABPB1-211ENST00000561010 GLI2P10070 1586 aa12.39□□□□□ -0.43
GABPB1-211ENST00000561010 KDM5BQ9UGL1 1544 aa12.38□□□□□ -0.43
GABPB1-211ENST00000561010 PLB1Q6P1J6 1458 aa12.38□□□□□ -0.43
GABPB1-211ENST00000561010 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
GABPB1-211ENST00000561010 ABCA8O94911 1581 aa12.35□□□□□ -0.43
GABPB1-211ENST00000561010 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
GABPB1-211ENST00000561010 COL17A1Q9UMD9 1497 aaPredicted RBP12.33□□□□□ -0.44
GABPB1-211ENST00000561010 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
GABPB1-211ENST00000561010 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
GABPB1-211ENST00000561010 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
GABPB1-211ENST00000561010 HAX1O00165 279 aa12.31□□□□□ -0.44
GABPB1-211ENST00000561010 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
GABPB1-211ENST00000561010 GOLGA3Q08378 1498 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms