RNA–Protein interactions for RNA: ENST00000559842.1

PRTG-203, Transcript of protogenin, humanhuman

TSL 4

Gene PRTG, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTG-203ENST00000559842 ABCB7O75027 752 aa10.53□□□□□ -0.72
PRTG-203ENST00000559842 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
PRTG-203ENST00000559842 MRC2Q9UBG0 1479 aa10.53□□□□□ -0.72
PRTG-203ENST00000559842 KIF21BO75037 1637 aa10.52□□□□□ -0.73
PRTG-203ENST00000559842 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
PRTG-203ENST00000559842 RUSC2Q8N2Y8 1516 aa10.52□□□□□ -0.73
PRTG-203ENST00000559842 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.73
PRTG-203ENST00000559842 FAM9AQ8IZU1 332 aaPredicted RBP10.51□□□□□ -0.73
PRTG-203ENST00000559842 WDR62O43379 1518 aa10.5□□□□□ -0.73
PRTG-203ENST00000559842 LOC105371045A0A1W2PR82 267 aa10.49□□□□□ -0.73
PRTG-203ENST00000559842 WDR97A6NE52 1622 aa10.48□□□□□ -0.73
PRTG-203ENST00000559842 GOLGA3Q08378 1498 aa10.48□□□□□ -0.73
PRTG-203ENST00000559842 ERICH3Q5RHP9 1530 aa10.48□□□□□ -0.73
PRTG-203ENST00000559842 CUX2O14529 1486 aa10.47□□□□□ -0.73
PRTG-203ENST00000559842 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
PRTG-203ENST00000559842 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
PRTG-203ENST00000559842 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
PRTG-203ENST00000559842 THOC2Q8NI27 1593 aaKnown RBP10.45□□□□□ -0.74
PRTG-203ENST00000559842 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
PRTG-203ENST00000559842 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
PRTG-203ENST00000559842 ABCA5Q8WWZ7 1642 aa10.43□□□□□ -0.74
PRTG-203ENST00000559842 IGF1RP08069 1367 aa10.42□□□□□ -0.74
PRTG-203ENST00000559842 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
PRTG-203ENST00000559842 CUL7Q14999 1698 aa10.4□□□□□ -0.74
PRTG-203ENST00000559842 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
PRTG-203ENST00000559842 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
PRTG-203ENST00000559842 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
PRTG-203ENST00000559842 CEP162Q5TB80 1403 aa10.34□□□□□ -0.75
PRTG-203ENST00000559842 UBTFP17480 764 aaKnown RBP10.34□□□□□ -0.75
PRTG-203ENST00000559842 TDRD9Q8NDG6 1382 aaKnown RBP10.33□□□□□ -0.76
PRTG-203ENST00000559842 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
PRTG-203ENST00000559842 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
PRTG-203ENST00000559842 POLA2Q14181 598 aa10.32□□□□□ -0.76
PRTG-203ENST00000559842 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
PRTG-203ENST00000559842 EIF4G3O43432 1585 aaKnown RBP10.29□□□□□ -0.76
PRTG-203ENST00000559842 ADAMTS12P58397 1594 aa10.28□□□□□ -0.76
PRTG-203ENST00000559842 CLIP1P30622 1438 aa10.28□□□□□ -0.76
PRTG-203ENST00000559842 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
PRTG-203ENST00000559842 AQRO60306 1485 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRTG-203ENST00000559842 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
PRTG-203ENST00000559842 MAGI1Q96QZ7 1491 aaPredicted RBP10.26□□□□□ -0.77
PRTG-203ENST00000559842 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
PRTG-203ENST00000559842 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
PRTG-203ENST00000559842 FBLN2P98095 1184 aa10.23□□□□□ -0.77
PRTG-203ENST00000559842 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
PRTG-203ENST00000559842 EFCAB5A4FU69 1503 aa10.22□□□□□ -0.77
PRTG-203ENST00000559842 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
PRTG-203ENST00000559842 SYNJ2O15056 1496 aa10.2□□□□□ -0.78
PRTG-203ENST00000559842 ARHGAP35Q9NRY4 1499 aa10.2□□□□□ -0.78
PRTG-203ENST00000559842 GRIN2AQ12879 1464 aa10.19□□□□□ -0.78
PRTG-203ENST00000559842 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
PRTG-203ENST00000559842 ARAP1Q96P48 1450 aa10.18□□□□□ -0.78
PRTG-203ENST00000559842 IQGAP2Q13576 1575 aa10.16□□□□□ -0.78
PRTG-203ENST00000559842 KIAA0586Q9BVV6 1533 aa10.16□□□□□ -0.78
PRTG-203ENST00000559842 SAMD9Q5K651 1589 aa10.15□□□□□ -0.78
PRTG-203ENST00000559842 FKBP8Q14318 412 aa10.15□□□□□ -0.78
PRTG-203ENST00000559842 NUP160Q12769 1436 aa10.14□□□□□ -0.79
PRTG-203ENST00000559842 UGGT2Q9NYU1 1516 aa10.13□□□□□ -0.79
PRTG-203ENST00000559842 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
PRTG-203ENST00000559842 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
PRTG-203ENST00000559842 MAP3K1Q13233 1512 aa10.11□□□□□ -0.79
PRTG-203ENST00000559842 FMN1Q68DA7 1419 aa10.1□□□□□ -0.79
PRTG-203ENST00000559842 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
PRTG-203ENST00000559842 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
PRTG-203ENST00000559842 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
PRTG-203ENST00000559842 CASKIN1Q8WXD9 1431 aa10.07□□□□□ -0.8
PRTG-203ENST00000559842 RANGAP1P46060 587 aaPredicted RBP10.06□□□□□ -0.8
PRTG-203ENST00000559842 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
PRTG-203ENST00000559842 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
PRTG-203ENST00000559842 CHD1O14646 1710 aa10.04□□□□□ -0.8
PRTG-203ENST00000559842 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
PRTG-203ENST00000559842 DISP1Q96F81 1524 aa10.04□□□□□ -0.8
PRTG-203ENST00000559842 PCF11O94913 1555 aaKnown RBP10.03□□□□□ -0.8
PRTG-203ENST00000559842 CFAP43Q8NDM7 1665 aa10.02□□□□□ -0.8
PRTG-203ENST00000559842 TIAM1Q13009 1591 aa10.02□□□□□ -0.81
PRTG-203ENST00000559842 CARMIL2Q6F5E8 1435 aa10.02□□□□□ -0.81
PRTG-203ENST00000559842 PROM2Q8N271 834 aa10.02□□□□□ -0.81
PRTG-203ENST00000559842 SHROOM2Q13796 1616 aa10□□□□□ -0.81
PRTG-203ENST00000559842 JPH4Q96JJ6 628 aa10□□□□□ -0.81
PRTG-203ENST00000559842 CCDC18Q5T9S5 1454 aa9.99□□□□□ -0.81
PRTG-203ENST00000559842 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
PRTG-203ENST00000559842 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
PRTG-203ENST00000559842 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
PRTG-203ENST00000559842 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
PRTG-203ENST00000559842 PCGF6Q9BYE7 350 aa9.99□□□□□ -0.81
PRTG-203ENST00000559842 HECW1Q76N89 1606 aa9.98□□□□□ -0.81
PRTG-203ENST00000559842 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
PRTG-203ENST00000559842 LRRC9Q6ZRR7 1453 aa9.98□□□□□ -0.81
PRTG-203ENST00000559842 AKT1S1Q96B36 256 aa9.95□□□□□ -0.82
PRTG-203ENST00000559842 RAPGEF6Q8TEU7 1601 aa9.94□□□□□ -0.82
PRTG-203ENST00000559842 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
PRTG-203ENST00000559842 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
PRTG-203ENST00000559842 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
PRTG-203ENST00000559842 PPARGC1BQ86YN6 1023 aaKnown RBP9.93□□□□□ -0.82
PRTG-203ENST00000559842 EPRSP07814 1512 aaKnown RBP9.92□□□□□ -0.82
PRTG-203ENST00000559842 EHBP1L1Q8N3D4 1523 aa9.92□□□□□ -0.82
PRTG-203ENST00000559842 RRBP1Q9P2E9 1410 aaKnown RBP9.92□□□□□ -0.82
PRTG-203ENST00000559842 ABCA8O94911 1581 aa9.92□□□□□ -0.82
PRTG-203ENST00000559842 NUP153P49790 1475 aaKnown RBP9.91□□□□□ -0.82
PRTG-203ENST00000559842 SSUH2Q9Y2M2 353 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms