RNA–Protein interactions for RNA: ENST00000559565.5

TRIP4-206, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-206ENST00000559565 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
TRIP4-206ENST00000559565 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
TRIP4-206ENST00000559565 WIZO95785 1651 aa15.36■□□□□ 0.05
TRIP4-206ENST00000559565 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIP4-206ENST00000559565 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
TRIP4-206ENST00000559565 WDR62O43379 1518 aa15.29■□□□□ 0.04
TRIP4-206ENST00000559565 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
TRIP4-206ENST00000559565 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
TRIP4-206ENST00000559565 CFTRP13569 1480 aa15.21■□□□□ 0.03
TRIP4-206ENST00000559565 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
TRIP4-206ENST00000559565 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
TRIP4-206ENST00000559565 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
TRIP4-206ENST00000559565 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
TRIP4-206ENST00000559565 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
TRIP4-206ENST00000559565 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
TRIP4-206ENST00000559565 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
TRIP4-206ENST00000559565 URB2Q14146 1524 aaKnown RBP15.12■□□□□ 0.01
TRIP4-206ENST00000559565 FKBP8Q14318 412 aa15.1■□□□□ 0.01
TRIP4-206ENST00000559565 HAX1O00165 279 aa15.06■□□□□ 0
TRIP4-206ENST00000559565 PROM2Q8N271 834 aa15.02■□□□□ -0
TRIP4-206ENST00000559565 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
TRIP4-206ENST00000559565 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
TRIP4-206ENST00000559565 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
TRIP4-206ENST00000559565 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
TRIP4-206ENST00000559565 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
TRIP4-206ENST00000559565 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
TRIP4-206ENST00000559565 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
TRIP4-206ENST00000559565 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
TRIP4-206ENST00000559565 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
TRIP4-206ENST00000559565 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
TRIP4-206ENST00000559565 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
TRIP4-206ENST00000559565 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
TRIP4-206ENST00000559565 DNMBPQ6XZF7 1577 aa14.84□□□□□ -0.03
TRIP4-206ENST00000559565 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
TRIP4-206ENST00000559565 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
TRIP4-206ENST00000559565 C19orf67A6NJJ6 358 aa14.81□□□□□ -0.04
TRIP4-206ENST00000559565 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
TRIP4-206ENST00000559565 EVX2Q03828 476 aa14.8□□□□□ -0.04
TRIP4-206ENST00000559565 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.041e-6■□□□□ 11
TRIP4-206ENST00000559565 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
TRIP4-206ENST00000559565 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
TRIP4-206ENST00000559565 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
TRIP4-206ENST00000559565 MIER1Q8N108 512 aa14.74□□□□□ -0.05
TRIP4-206ENST00000559565 CHD1O14646 1710 aa14.74□□□□□ -0.05
TRIP4-206ENST00000559565 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
TRIP4-206ENST00000559565 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRIP4-206ENST00000559565 CYB5RLQ6IPT4 315 aa14.72□□□□□ -0.05
TRIP4-206ENST00000559565 PLCD3Q8N3E9 789 aa14.7□□□□□ -0.06
TRIP4-206ENST00000559565 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
TRIP4-206ENST00000559565 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
TRIP4-206ENST00000559565 SOGA1O94964 1423 aa14.68□□□□□ -0.06
TRIP4-206ENST00000559565 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
TRIP4-206ENST00000559565 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
TRIP4-206ENST00000559565 CUX1P39880 1505 aa14.63□□□□□ -0.07
TRIP4-206ENST00000559565 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
TRIP4-206ENST00000559565 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
TRIP4-206ENST00000559565 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
TRIP4-206ENST00000559565 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
TRIP4-206ENST00000559565 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
TRIP4-206ENST00000559565 CLASP1Q7Z460 1538 aa14.59□□□□□ -0.07
TRIP4-206ENST00000559565 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
TRIP4-206ENST00000559565 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
TRIP4-206ENST00000559565 MAGI1Q96QZ7 1491 aaPredicted RBP14.57□□□□□ -0.08
TRIP4-206ENST00000559565 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
TRIP4-206ENST00000559565 SYNJ2O15056 1496 aa14.53□□□□□ -0.08
TRIP4-206ENST00000559565 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
TRIP4-206ENST00000559565 GABBR2O75899 941 aa14.52□□□□□ -0.09
TRIP4-206ENST00000559565 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
TRIP4-206ENST00000559565 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
TRIP4-206ENST00000559565 ZNF579Q8NAF0 562 aaKnown RBP14.48□□□□□ -0.09
TRIP4-206ENST00000559565 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
TRIP4-206ENST00000559565 PBRM1Q86U86 1689 aa14.48□□□□□ -0.09
TRIP4-206ENST00000559565 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
TRIP4-206ENST00000559565 VASPP50552 380 aaPredicted RBP14.46□□□□□ -0.09
TRIP4-206ENST00000559565 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
TRIP4-206ENST00000559565 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
TRIP4-206ENST00000559565 CLCN6P51797 869 aa14.41□□□□□ -0.1
TRIP4-206ENST00000559565 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
TRIP4-206ENST00000559565 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
TRIP4-206ENST00000559565 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
TRIP4-206ENST00000559565 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
TRIP4-206ENST00000559565 ERCC6L2Q5T890 1561 aa14.38□□□□□ -0.11
TRIP4-206ENST00000559565 NUP160Q12769 1436 aa14.36□□□□□ -0.11
TRIP4-206ENST00000559565 ADAMTS12P58397 1594 aa14.35□□□□□ -0.11
TRIP4-206ENST00000559565 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
TRIP4-206ENST00000559565 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
TRIP4-206ENST00000559565 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
TRIP4-206ENST00000559565 NUBP1P53384 320 aa14.32□□□□□ -0.12
TRIP4-206ENST00000559565 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
TRIP4-206ENST00000559565 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
TRIP4-206ENST00000559565 DCBLD2Q96PD2 775 aa14.3□□□□□ -0.12
TRIP4-206ENST00000559565 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
TRIP4-206ENST00000559565 SHROOM2Q13796 1616 aa14.3□□□□□ -0.12
TRIP4-206ENST00000559565 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
TRIP4-206ENST00000559565 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
TRIP4-206ENST00000559565 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
TRIP4-206ENST00000559565 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
TRIP4-206ENST00000559565 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
TRIP4-206ENST00000559565 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.13
TRIP4-206ENST00000559565 IFNLR1Q8IU57 520 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms