RNA–Protein interactions for RNA: ENST00000559565.5

TRIP4-206, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-206ENST00000559565 AEBP2Q6ZN18 517 aaPredicted RBP28.49■■■□□ 2.15
TRIP4-206ENST00000559565 CHIC1Q5VXU3 224 aa27.45■■□□□ 1.98
TRIP4-206ENST00000559565 SENP3Q9H4L4 574 aaPredicted RBP24.31■■□□□ 1.48
TRIP4-206ENST00000559565 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
TRIP4-206ENST00000559565 FOXD1Q16676 465 aa22.58■■□□□ 1.21
TRIP4-206ENST00000559565 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
TRIP4-206ENST00000559565 ADRA2BP18089 450 aa21.38■■□□□ 1.01
TRIP4-206ENST00000559565 PPP6R1Q9UPN7 881 aa21.38■■□□□ 1.01
TRIP4-206ENST00000559565 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
TRIP4-206ENST00000559565 MSH5O43196 834 aa21.03■□□□□ 0.96
TRIP4-206ENST00000559565 NISCHQ9Y2I1 1504 aa20.19■□□□□ 0.82
TRIP4-206ENST00000559565 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
TRIP4-206ENST00000559565 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
TRIP4-206ENST00000559565 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.72
TRIP4-206ENST00000559565 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
TRIP4-206ENST00000559565 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
TRIP4-206ENST00000559565 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
TRIP4-206ENST00000559565 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
TRIP4-206ENST00000559565 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
TRIP4-206ENST00000559565 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
TRIP4-206ENST00000559565 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
TRIP4-206ENST00000559565 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
TRIP4-206ENST00000559565 KCNA4P22459 653 aa18.53■□□□□ 0.56
TRIP4-206ENST00000559565 ABCC9O60706 1549 aa18.28■□□□□ 0.52
TRIP4-206ENST00000559565 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
TRIP4-206ENST00000559565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.475e-7■□□□□ 9.5
TRIP4-206ENST00000559565 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
TRIP4-206ENST00000559565 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
TRIP4-206ENST00000559565 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
TRIP4-206ENST00000559565 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
TRIP4-206ENST00000559565 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
TRIP4-206ENST00000559565 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
TRIP4-206ENST00000559565 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
TRIP4-206ENST00000559565 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
TRIP4-206ENST00000559565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
TRIP4-206ENST00000559565 CAPN15O75808 1086 aa17.22■□□□□ 0.35
TRIP4-206ENST00000559565 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
TRIP4-206ENST00000559565 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
TRIP4-206ENST00000559565 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
TRIP4-206ENST00000559565 NACADO15069 1562 aa17.19■□□□□ 0.34
TRIP4-206ENST00000559565 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
TRIP4-206ENST00000559565 APLP2Q06481 763 aa17.17■□□□□ 0.34
TRIP4-206ENST00000559565 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
TRIP4-206ENST00000559565 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
TRIP4-206ENST00000559565 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
TRIP4-206ENST00000559565 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRIP4-206ENST00000559565 ZBTB22O15209 634 aa17■□□□□ 0.31
TRIP4-206ENST00000559565 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
TRIP4-206ENST00000559565 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.3
TRIP4-206ENST00000559565 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
TRIP4-206ENST00000559565 DSG3P32926 999 aa16.93■□□□□ 0.3
TRIP4-206ENST00000559565 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
TRIP4-206ENST00000559565 ABCB7O75027 752 aa16.85■□□□□ 0.29
TRIP4-206ENST00000559565 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
TRIP4-206ENST00000559565 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
TRIP4-206ENST00000559565 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
TRIP4-206ENST00000559565 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
TRIP4-206ENST00000559565 POLA2Q14181 598 aa16.62■□□□□ 0.25
TRIP4-206ENST00000559565 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
TRIP4-206ENST00000559565 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
TRIP4-206ENST00000559565 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
TRIP4-206ENST00000559565 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
TRIP4-206ENST00000559565 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
TRIP4-206ENST00000559565 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
TRIP4-206ENST00000559565 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
TRIP4-206ENST00000559565 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
TRIP4-206ENST00000559565 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
TRIP4-206ENST00000559565 FBLN2P98095 1184 aa16.12■□□□□ 0.17
TRIP4-206ENST00000559565 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
TRIP4-206ENST00000559565 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
TRIP4-206ENST00000559565 MKRN4PQ13434 485 aaPredicted RBP15.94■□□□□ 0.14
TRIP4-206ENST00000559565 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
TRIP4-206ENST00000559565 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
TRIP4-206ENST00000559565 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
TRIP4-206ENST00000559565 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
TRIP4-206ENST00000559565 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
TRIP4-206ENST00000559565 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
TRIP4-206ENST00000559565 CUX2O14529 1486 aa15.79■□□□□ 0.12
TRIP4-206ENST00000559565 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
TRIP4-206ENST00000559565 ERCC6Q03468 1493 aa15.75■□□□□ 0.11
TRIP4-206ENST00000559565 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
TRIP4-206ENST00000559565 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
TRIP4-206ENST00000559565 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
TRIP4-206ENST00000559565 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
TRIP4-206ENST00000559565 NESP48681 1621 aa15.69■□□□□ 0.1
TRIP4-206ENST00000559565 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
TRIP4-206ENST00000559565 POTEHQ6S545 545 aa15.66■□□□□ 0.1
TRIP4-206ENST00000559565 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
TRIP4-206ENST00000559565 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
TRIP4-206ENST00000559565 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
TRIP4-206ENST00000559565 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
TRIP4-206ENST00000559565 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
TRIP4-206ENST00000559565 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
TRIP4-206ENST00000559565 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
TRIP4-206ENST00000559565 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
TRIP4-206ENST00000559565 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
TRIP4-206ENST00000559565 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
TRIP4-206ENST00000559565 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
TRIP4-206ENST00000559565 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
TRIP4-206ENST00000559565 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms