RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 EVX2Q03828 476 aa15.83■□□□□ 0.12
SHC4-205ENST00000558220 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
SHC4-205ENST00000558220 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
SHC4-205ENST00000558220 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
SHC4-205ENST00000558220 WIZO95785 1651 aa15.77■□□□□ 0.12
SHC4-205ENST00000558220 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
SHC4-205ENST00000558220 WDR62O43379 1518 aa15.64■□□□□ 0.09
SHC4-205ENST00000558220 C19orf67A6NJJ6 358 aa15.63■□□□□ 0.09
SHC4-205ENST00000558220 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
SHC4-205ENST00000558220 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
SHC4-205ENST00000558220 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
SHC4-205ENST00000558220 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
SHC4-205ENST00000558220 CHADLQ6NUI6 762 aa15.59■□□□□ 0.09
SHC4-205ENST00000558220 CFTRP13569 1480 aa15.59■□□□□ 0.09
SHC4-205ENST00000558220 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
SHC4-205ENST00000558220 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.09
SHC4-205ENST00000558220 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
SHC4-205ENST00000558220 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
SHC4-205ENST00000558220 GABBR2O75899 941 aa15.45■□□□□ 0.06
SHC4-205ENST00000558220 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
SHC4-205ENST00000558220 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
SHC4-205ENST00000558220 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
SHC4-205ENST00000558220 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
SHC4-205ENST00000558220 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
SHC4-205ENST00000558220 IFT140Q96RY7 1462 aa15.32■□□□□ 0.04
SHC4-205ENST00000558220 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
SHC4-205ENST00000558220 TOPBP1Q92547 1522 aa15.27■□□□□ 0.04
SHC4-205ENST00000558220 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
SHC4-205ENST00000558220 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
SHC4-205ENST00000558220 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
SHC4-205ENST00000558220 LHX8Q68G74 356 aa15.16■□□□□ 0.02
SHC4-205ENST00000558220 TARBP1Q13395 1621 aaKnown RBP15.15■□□□□ 0.02
SHC4-205ENST00000558220 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
SHC4-205ENST00000558220 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
SHC4-205ENST00000558220 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
SHC4-205ENST00000558220 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
SHC4-205ENST00000558220 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
SHC4-205ENST00000558220 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
SHC4-205ENST00000558220 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
SHC4-205ENST00000558220 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
SHC4-205ENST00000558220 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHC4-205ENST00000558220 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
SHC4-205ENST00000558220 CHD1O14646 1710 aa15.09■□□□□ 0.01
SHC4-205ENST00000558220 ARHGEF11O15085 1522 aa15.08■□□□□ 0.01
SHC4-205ENST00000558220 CLCN6P51797 869 aa15.08■□□□□ 0
SHC4-205ENST00000558220 SOGA1O94964 1423 aa15.08■□□□□ 0
SHC4-205ENST00000558220 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
SHC4-205ENST00000558220 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
SHC4-205ENST00000558220 RAD54L2Q9Y4B4 1467 aa15.03■□□□□ -0
SHC4-205ENST00000558220 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
SHC4-205ENST00000558220 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
SHC4-205ENST00000558220 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
SHC4-205ENST00000558220 CUX1P39880 1505 aa14.97□□□□□ -0.01
SHC4-205ENST00000558220 MAGI1Q96QZ7 1491 aaPredicted RBP14.97□□□□□ -0.01
SHC4-205ENST00000558220 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
SHC4-205ENST00000558220 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
SHC4-205ENST00000558220 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
SHC4-205ENST00000558220 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
SHC4-205ENST00000558220 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
SHC4-205ENST00000558220 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
SHC4-205ENST00000558220 SYNJ2O15056 1496 aa14.9□□□□□ -0.02
SHC4-205ENST00000558220 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
SHC4-205ENST00000558220 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
SHC4-205ENST00000558220 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
SHC4-205ENST00000558220 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
SHC4-205ENST00000558220 GALR2O43603 387 aaPredicted RBP14.89□□□□□ -0.03
SHC4-205ENST00000558220 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
SHC4-205ENST00000558220 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
SHC4-205ENST00000558220 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
SHC4-205ENST00000558220 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
SHC4-205ENST00000558220 PHF12Q96QT6 1004 aa14.83□□□□□ -0.04
SHC4-205ENST00000558220 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
SHC4-205ENST00000558220 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
SHC4-205ENST00000558220 TOP2BQ02880 1626 aa14.79□□□□□ -0.04
SHC4-205ENST00000558220 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
SHC4-205ENST00000558220 PROM2Q8N271 834 aa14.75□□□□□ -0.05
SHC4-205ENST00000558220 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
SHC4-205ENST00000558220 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
SHC4-205ENST00000558220 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
SHC4-205ENST00000558220 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.06
SHC4-205ENST00000558220 NUP160Q12769 1436 aa14.69□□□□□ -0.06
SHC4-205ENST00000558220 CEP170Q5SW79 1584 aa14.66□□□□□ -0.06
SHC4-205ENST00000558220 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
SHC4-205ENST00000558220 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
SHC4-205ENST00000558220 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
SHC4-205ENST00000558220 MS4A3Q96HJ5 214 aa14.62□□□□□ -0.07
SHC4-205ENST00000558220 OTUD5Q96G74 571 aa14.61□□□□□ -0.07
SHC4-205ENST00000558220 ERCC6L2Q5T890 1561 aa14.6□□□□□ -0.07
SHC4-205ENST00000558220 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
SHC4-205ENST00000558220 JPH4Q96JJ6 628 aa14.57□□□□□ -0.08
SHC4-205ENST00000558220 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
SHC4-205ENST00000558220 PRG4Q92954 1404 aaPredicted RBP14.55□□□□□ -0.08
SHC4-205ENST00000558220 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
SHC4-205ENST00000558220 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
SHC4-205ENST00000558220 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
SHC4-205ENST00000558220 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
SHC4-205ENST00000558220 CUL7Q14999 1698 aa14.51□□□□□ -0.09
SHC4-205ENST00000558220 METRNQ9UJH8 293 aa14.49□□□□□ -0.09
SHC4-205ENST00000558220 KIAA0586Q9BVV6 1533 aa14.47□□□□□ -0.09
SHC4-205ENST00000558220 KIF13AQ9H1H9 1805 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms