RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 AEBP2Q6ZN18 517 aaPredicted RBP29.94■■■□□ 2.38
SHC4-205ENST00000558220 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
SHC4-205ENST00000558220 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
SHC4-205ENST00000558220 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
SHC4-205ENST00000558220 FOXD1Q16676 465 aa23.84■■□□□ 1.41
SHC4-205ENST00000558220 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
SHC4-205ENST00000558220 MSH5O43196 834 aa22.36■■□□□ 1.17
SHC4-205ENST00000558220 PIAS4Q8N2W9 510 aaPredicted RBP22.22■■□□□ 1.15
SHC4-205ENST00000558220 POTEDQ86YR6 584 aa22.21■■□□□ 1.15
SHC4-205ENST00000558220 PPP6R1Q9UPN7 881 aa22.15■■□□□ 1.14
SHC4-205ENST00000558220 ADRA2BP18089 450 aa22.06■■□□□ 1.12
SHC4-205ENST00000558220 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
SHC4-205ENST00000558220 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
SHC4-205ENST00000558220 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
SHC4-205ENST00000558220 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
SHC4-205ENST00000558220 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
SHC4-205ENST00000558220 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
SHC4-205ENST00000558220 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
SHC4-205ENST00000558220 CACNB1Q02641 598 aaPredicted RBP19.32■□□□□ 0.68
SHC4-205ENST00000558220 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
SHC4-205ENST00000558220 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
SHC4-205ENST00000558220 RNF39Q9H2S5 420 aa19.09■□□□□ 0.65
SHC4-205ENST00000558220 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
SHC4-205ENST00000558220 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
SHC4-205ENST00000558220 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
SHC4-205ENST00000558220 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
SHC4-205ENST00000558220 ABCC9O60706 1549 aa18.6■□□□□ 0.57
SHC4-205ENST00000558220 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
SHC4-205ENST00000558220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHC4-205ENST00000558220 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
SHC4-205ENST00000558220 KCNA4P22459 653 aa18.03■□□□□ 0.48
SHC4-205ENST00000558220 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
SHC4-205ENST00000558220 CAPN15O75808 1086 aa17.85■□□□□ 0.45
SHC4-205ENST00000558220 DSG3P32926 999 aa17.81■□□□□ 0.44
SHC4-205ENST00000558220 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
SHC4-205ENST00000558220 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
SHC4-205ENST00000558220 NACADO15069 1562 aa17.66■□□□□ 0.42
SHC4-205ENST00000558220 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
SHC4-205ENST00000558220 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
SHC4-205ENST00000558220 APLP2Q06481 763 aa17.5■□□□□ 0.39
SHC4-205ENST00000558220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
SHC4-205ENST00000558220 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
SHC4-205ENST00000558220 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
SHC4-205ENST00000558220 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
SHC4-205ENST00000558220 ABCB7O75027 752 aa17.43■□□□□ 0.38
SHC4-205ENST00000558220 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
SHC4-205ENST00000558220 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
SHC4-205ENST00000558220 POTEHQ6S545 545 aa17.35■□□□□ 0.37
SHC4-205ENST00000558220 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
SHC4-205ENST00000558220 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
SHC4-205ENST00000558220 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
SHC4-205ENST00000558220 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
SHC4-205ENST00000558220 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
SHC4-205ENST00000558220 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
SHC4-205ENST00000558220 POLA2Q14181 598 aa17.01■□□□□ 0.31
SHC4-205ENST00000558220 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
SHC4-205ENST00000558220 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
SHC4-205ENST00000558220 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
SHC4-205ENST00000558220 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
SHC4-205ENST00000558220 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
SHC4-205ENST00000558220 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
SHC4-205ENST00000558220 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
SHC4-205ENST00000558220 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
SHC4-205ENST00000558220 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
SHC4-205ENST00000558220 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
SHC4-205ENST00000558220 ZBTB22O15209 634 aa16.6■□□□□ 0.25
SHC4-205ENST00000558220 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
SHC4-205ENST00000558220 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
SHC4-205ENST00000558220 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
SHC4-205ENST00000558220 ATXN8OSP0DMR3 200 aa16.36■□□□□ 0.21
SHC4-205ENST00000558220 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
SHC4-205ENST00000558220 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
SHC4-205ENST00000558220 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
SHC4-205ENST00000558220 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
SHC4-205ENST00000558220 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
SHC4-205ENST00000558220 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
SHC4-205ENST00000558220 SP7Q8TDD2 431 aaPredicted RBP16.17■□□□□ 0.18
SHC4-205ENST00000558220 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
SHC4-205ENST00000558220 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
SHC4-205ENST00000558220 FXR2P51116 673 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHC4-205ENST00000558220 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
SHC4-205ENST00000558220 FBLN2P98095 1184 aa16.12■□□□□ 0.17
SHC4-205ENST00000558220 CUX2O14529 1486 aa16.11■□□□□ 0.17
SHC4-205ENST00000558220 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
SHC4-205ENST00000558220 SPDYE2BA6NHP3 402 aa16.09■□□□□ 0.17
SHC4-205ENST00000558220 SPDYE6P0CI01 402 aa16.09■□□□□ 0.17
SHC4-205ENST00000558220 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
SHC4-205ENST00000558220 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
SHC4-205ENST00000558220 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
SHC4-205ENST00000558220 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
SHC4-205ENST00000558220 HAX1O00165 279 aa16.01■□□□□ 0.15
SHC4-205ENST00000558220 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
SHC4-205ENST00000558220 NESP48681 1621 aa15.94■□□□□ 0.14
SHC4-205ENST00000558220 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
SHC4-205ENST00000558220 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
SHC4-205ENST00000558220 SSUH2Q9Y2M2 353 aa15.87■□□□□ 0.13
SHC4-205ENST00000558220 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
SHC4-205ENST00000558220 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
SHC4-205ENST00000558220 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
SHC4-205ENST00000558220 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms