RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
LYSMD2-203ENST00000558126 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
LYSMD2-203ENST00000558126 GRIN2BQ13224 1484 aa19.04■□□□□ 0.64
LYSMD2-203ENST00000558126 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
LYSMD2-203ENST00000558126 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
LYSMD2-203ENST00000558126 CUX1P39880 1505 aa19■□□□□ 0.63
LYSMD2-203ENST00000558126 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
LYSMD2-203ENST00000558126 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
LYSMD2-203ENST00000558126 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
LYSMD2-203ENST00000558126 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
LYSMD2-203ENST00000558126 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
LYSMD2-203ENST00000558126 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
LYSMD2-203ENST00000558126 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
LYSMD2-203ENST00000558126 NUP160Q12769 1436 aa18.77■□□□□ 0.6
LYSMD2-203ENST00000558126 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
LYSMD2-203ENST00000558126 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
LYSMD2-203ENST00000558126 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
LYSMD2-203ENST00000558126 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
LYSMD2-203ENST00000558126 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
LYSMD2-203ENST00000558126 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.58
LYSMD2-203ENST00000558126 TOP2BQ02880 1626 aa18.64■□□□□ 0.57
LYSMD2-203ENST00000558126 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
LYSMD2-203ENST00000558126 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
LYSMD2-203ENST00000558126 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
LYSMD2-203ENST00000558126 CAPN15O75808 1086 aa18.61■□□□□ 0.57
LYSMD2-203ENST00000558126 JPH4Q96JJ6 628 aa18.6■□□□□ 0.57
LYSMD2-203ENST00000558126 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
LYSMD2-203ENST00000558126 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
LYSMD2-203ENST00000558126 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
LYSMD2-203ENST00000558126 DSG3P32926 999 aa18.51■□□□□ 0.55
LYSMD2-203ENST00000558126 APLP2Q06481 763 aa18.48■□□□□ 0.55
LYSMD2-203ENST00000558126 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
LYSMD2-203ENST00000558126 ABCC10Q5T3U5 1492 aa18.46■□□□□ 0.54
LYSMD2-203ENST00000558126 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
LYSMD2-203ENST00000558126 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
LYSMD2-203ENST00000558126 KIAA0586Q9BVV6 1533 aa18.41■□□□□ 0.54
LYSMD2-203ENST00000558126 IGF1RP08069 1367 aa18.41■□□□□ 0.54
LYSMD2-203ENST00000558126 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
LYSMD2-203ENST00000558126 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
LYSMD2-203ENST00000558126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
LYSMD2-203ENST00000558126 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
LYSMD2-203ENST00000558126 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
LYSMD2-203ENST00000558126 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
LYSMD2-203ENST00000558126 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
LYSMD2-203ENST00000558126 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
LYSMD2-203ENST00000558126 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
LYSMD2-203ENST00000558126 PTPRGP23470 1445 aa18.28■□□□□ 0.52
LYSMD2-203ENST00000558126 CUL7Q14999 1698 aa18.26■□□□□ 0.51
LYSMD2-203ENST00000558126 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
LYSMD2-203ENST00000558126 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
LYSMD2-203ENST00000558126 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
LYSMD2-203ENST00000558126 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
LYSMD2-203ENST00000558126 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
LYSMD2-203ENST00000558126 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
LYSMD2-203ENST00000558126 KDM6BO15054 1643 aa18.2■□□□□ 0.5
LYSMD2-203ENST00000558126 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
LYSMD2-203ENST00000558126 UHRF1BP1LA0JNW5 1464 aa18.18■□□□□ 0.5
LYSMD2-203ENST00000558126 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
LYSMD2-203ENST00000558126 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
LYSMD2-203ENST00000558126 GLI2P10070 1586 aa18.14■□□□□ 0.49
LYSMD2-203ENST00000558126 UACAQ9BZF9 1416 aa18.13■□□□□ 0.49
LYSMD2-203ENST00000558126 ABCB7O75027 752 aa18.1■□□□□ 0.49
LYSMD2-203ENST00000558126 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
LYSMD2-203ENST00000558126 DISP1Q96F81 1524 aa18.08■□□□□ 0.48
LYSMD2-203ENST00000558126 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
LYSMD2-203ENST00000558126 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
LYSMD2-203ENST00000558126 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
LYSMD2-203ENST00000558126 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
LYSMD2-203ENST00000558126 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
LYSMD2-203ENST00000558126 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
LYSMD2-203ENST00000558126 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
LYSMD2-203ENST00000558126 COL17A1Q9UMD9 1497 aaPredicted RBP18.01■□□□□ 0.47
LYSMD2-203ENST00000558126 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
LYSMD2-203ENST00000558126 ZBTB22O15209 634 aa17.99■□□□□ 0.47
LYSMD2-203ENST00000558126 POTEHQ6S545 545 aa17.99■□□□□ 0.47
LYSMD2-203ENST00000558126 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
LYSMD2-203ENST00000558126 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
LYSMD2-203ENST00000558126 KIAA0556O60303 1618 aa17.93■□□□□ 0.46
LYSMD2-203ENST00000558126 WDR7Q9Y4E6 1490 aa17.92■□□□□ 0.46
LYSMD2-203ENST00000558126 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
LYSMD2-203ENST00000558126 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
LYSMD2-203ENST00000558126 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
LYSMD2-203ENST00000558126 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
LYSMD2-203ENST00000558126 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
LYSMD2-203ENST00000558126 ABCA8O94911 1581 aa17.83■□□□□ 0.44
LYSMD2-203ENST00000558126 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
LYSMD2-203ENST00000558126 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
LYSMD2-203ENST00000558126 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
LYSMD2-203ENST00000558126 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
LYSMD2-203ENST00000558126 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
LYSMD2-203ENST00000558126 CFAP43Q8NDM7 1665 aa17.77■□□□□ 0.44
LYSMD2-203ENST00000558126 ARAP3Q8WWN8 1544 aa17.76■□□□□ 0.43
LYSMD2-203ENST00000558126 HECW2Q9P2P5 1572 aa17.75■□□□□ 0.43
LYSMD2-203ENST00000558126 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
LYSMD2-203ENST00000558126 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
LYSMD2-203ENST00000558126 ATP10BO94823 1461 aa17.71■□□□□ 0.43
LYSMD2-203ENST00000558126 POLA2Q14181 598 aa17.71■□□□□ 0.43
LYSMD2-203ENST00000558126 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
LYSMD2-203ENST00000558126 NEO1Q92859 1461 aa17.63■□□□□ 0.41
LYSMD2-203ENST00000558126 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms