RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 EVX2Q03828 476 aa11.68□□□□□ -0.54
IDH3A-204ENST00000558016 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
IDH3A-204ENST00000558016 NESP48681 1621 aa11.65□□□□□ -0.54
IDH3A-204ENST00000558016 WIZO95785 1651 aa11.65□□□□□ -0.55
IDH3A-204ENST00000558016 CUX2O14529 1486 aa11.63□□□□□ -0.55
IDH3A-204ENST00000558016 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
IDH3A-204ENST00000558016 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
IDH3A-204ENST00000558016 FARP1Q9Y4F1 1045 aaPredicted RBP11.58□□□□□ -0.56
IDH3A-204ENST00000558016 PDS5BQ9NTI5 1447 aa11.57□□□□□ -0.56
IDH3A-204ENST00000558016 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
IDH3A-204ENST00000558016 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
IDH3A-204ENST00000558016 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
IDH3A-204ENST00000558016 KIF21AQ7Z4S6 1674 aa11.53□□□□□ -0.56
IDH3A-204ENST00000558016 PROM2Q8N271 834 aa11.52□□□□□ -0.57
IDH3A-204ENST00000558016 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.57
IDH3A-204ENST00000558016 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
IDH3A-204ENST00000558016 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
IDH3A-204ENST00000558016 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
IDH3A-204ENST00000558016 MRC2Q9UBG0 1479 aa11.47□□□□□ -0.57
IDH3A-204ENST00000558016 FKBP8Q14318 412 aa11.45□□□□□ -0.58
IDH3A-204ENST00000558016 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
IDH3A-204ENST00000558016 CFTRP13569 1480 aa11.41□□□□□ -0.58
IDH3A-204ENST00000558016 GABBR2O75899 941 aa11.41□□□□□ -0.58
IDH3A-204ENST00000558016 WDR62O43379 1518 aa11.4□□□□□ -0.58
IDH3A-204ENST00000558016 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
IDH3A-204ENST00000558016 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
IDH3A-204ENST00000558016 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
IDH3A-204ENST00000558016 DNAJC5Q9H3Z4 198 aa11.36□□□□□ -0.59
IDH3A-204ENST00000558016 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
IDH3A-204ENST00000558016 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
IDH3A-204ENST00000558016 MIER1Q8N108 512 aa11.31□□□□□ -0.6
IDH3A-204ENST00000558016 URB2Q14146 1524 aaKnown RBP11.3□□□□□ -0.6
IDH3A-204ENST00000558016 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
IDH3A-204ENST00000558016 SUPT5HO00267 1087 aaKnown RBP11.27□□□□□ -0.61
IDH3A-204ENST00000558016 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
IDH3A-204ENST00000558016 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
IDH3A-204ENST00000558016 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
IDH3A-204ENST00000558016 CLCN6P51797 869 aa11.22□□□□□ -0.61
IDH3A-204ENST00000558016 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
IDH3A-204ENST00000558016 DNMBPQ6XZF7 1577 aa11.21□□□□□ -0.61
IDH3A-204ENST00000558016 PHF12Q96QT6 1004 aa11.21□□□□□ -0.61
IDH3A-204ENST00000558016 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
IDH3A-204ENST00000558016 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
IDH3A-204ENST00000558016 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
IDH3A-204ENST00000558016 GALR2O43603 387 aaPredicted RBP11.17□□□□□ -0.62
IDH3A-204ENST00000558016 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
IDH3A-204ENST00000558016 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
IDH3A-204ENST00000558016 EIF4G3O43432 1585 aaKnown RBP11.14□□□□□ -0.63
IDH3A-204ENST00000558016 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
IDH3A-204ENST00000558016 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
IDH3A-204ENST00000558016 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
IDH3A-204ENST00000558016 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
IDH3A-204ENST00000558016 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
IDH3A-204ENST00000558016 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
IDH3A-204ENST00000558016 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
IDH3A-204ENST00000558016 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
IDH3A-204ENST00000558016 TARBP1Q13395 1621 aaKnown RBP11.07□□□□□ -0.64
IDH3A-204ENST00000558016 SOGA1O94964 1423 aa11.07□□□□□ -0.64
IDH3A-204ENST00000558016 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
IDH3A-204ENST00000558016 CUX1P39880 1505 aa11.06□□□□□ -0.64
IDH3A-204ENST00000558016 MS4A3Q96HJ5 214 aa11.06□□□□□ -0.64
IDH3A-204ENST00000558016 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■■■ 26.9
IDH3A-204ENST00000558016 NUBP1P53384 320 aa11.03□□□□□ -0.64
IDH3A-204ENST00000558016 LHX8Q68G74 356 aa11.03□□□□□ -0.64
IDH3A-204ENST00000558016 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
IDH3A-204ENST00000558016 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
IDH3A-204ENST00000558016 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
IDH3A-204ENST00000558016 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
IDH3A-204ENST00000558016 CHD1O14646 1710 aa11.01□□□□□ -0.65
IDH3A-204ENST00000558016 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
IDH3A-204ENST00000558016 WRNQ14191 1432 aaPredicted RBP eCLIP10.98□□□□□ -0.65
IDH3A-204ENST00000558016 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
IDH3A-204ENST00000558016 MAP3K13O43283 966 aa10.97□□□□□ -0.65
IDH3A-204ENST00000558016 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
IDH3A-204ENST00000558016 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.65
IDH3A-204ENST00000558016 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.65
IDH3A-204ENST00000558016 FAM212AQ96EL1 285 aa10.96□□□□□ -0.65
IDH3A-204ENST00000558016 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
IDH3A-204ENST00000558016 RIMBP3CA6NJZ7 1639 aa10.95□□□□□ -0.66
IDH3A-204ENST00000558016 RIMBP3BA6NNM3 1639 aa10.95□□□□□ -0.66
IDH3A-204ENST00000558016 RIMBP3Q9UFD9 1639 aa10.95□□□□□ -0.66
IDH3A-204ENST00000558016 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
IDH3A-204ENST00000558016 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
IDH3A-204ENST00000558016 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
IDH3A-204ENST00000558016 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
IDH3A-204ENST00000558016 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
IDH3A-204ENST00000558016 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
IDH3A-204ENST00000558016 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
IDH3A-204ENST00000558016 ATMINO43313 823 aaPredicted RBP10.92□□□□□ -0.66
IDH3A-204ENST00000558016 DCAF8Q5TAQ9 597 aa10.92□□□□□ -0.66
IDH3A-204ENST00000558016 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
IDH3A-204ENST00000558016 SYNJ2O15056 1496 aa10.92□□□□□ -0.66
IDH3A-204ENST00000558016 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
IDH3A-204ENST00000558016 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
IDH3A-204ENST00000558016 PCDHB13Q9Y5F0 798 aa10.89□□□□□ -0.67
IDH3A-204ENST00000558016 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
IDH3A-204ENST00000558016 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
IDH3A-204ENST00000558016 CLASP1Q7Z460 1538 aa10.85□□□□□ -0.67
IDH3A-204ENST00000558016 PYGBP11216 843 aa10.85□□□□□ -0.67
IDH3A-204ENST00000558016 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms