RNA–Protein interactions for RNA: ENST00000557856.5

NTRK3-208, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK3, Length 2,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-208ENST00000557856 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
NTRK3-208ENST00000557856 IGF1RP08069 1367 aa14.46□□□□□ -0.1
NTRK3-208ENST00000557856 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
NTRK3-208ENST00000557856 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
NTRK3-208ENST00000557856 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
NTRK3-208ENST00000557856 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
NTRK3-208ENST00000557856 APLP2Q06481 763 aa14.36□□□□□ -0.11
NTRK3-208ENST00000557856 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
NTRK3-208ENST00000557856 P3H3Q8IVL6 736 aa14.35□□□□□ -0.11
NTRK3-208ENST00000557856 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.12
NTRK3-208ENST00000557856 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
NTRK3-208ENST00000557856 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
NTRK3-208ENST00000557856 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
NTRK3-208ENST00000557856 CUL7Q14999 1698 aa14.29□□□□□ -0.12
NTRK3-208ENST00000557856 ZNF608Q9ULD9 1512 aaPredicted RBP14.26□□□□□ -0.13
NTRK3-208ENST00000557856 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
NTRK3-208ENST00000557856 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
NTRK3-208ENST00000557856 ERICH6Q7L0X2 663 aa14.25□□□□□ -0.13
NTRK3-208ENST00000557856 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
NTRK3-208ENST00000557856 FBLN2P98095 1184 aa14.23□□□□□ -0.13
NTRK3-208ENST00000557856 TARBP1Q13395 1621 aaKnown RBP14.21□□□□□ -0.14
NTRK3-208ENST00000557856 BCANQ96GW7 911 aa14.18□□□□□ -0.14
NTRK3-208ENST00000557856 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
NTRK3-208ENST00000557856 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
NTRK3-208ENST00000557856 EFCAB5A4FU69 1503 aa14.16□□□□□ -0.14
NTRK3-208ENST00000557856 WDR62O43379 1518 aa14.16□□□□□ -0.14
NTRK3-208ENST00000557856 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
NTRK3-208ENST00000557856 MAP3K1Q13233 1512 aa14.15□□□□□ -0.14
NTRK3-208ENST00000557856 RBM19Q9Y4C8 960 aaKnown RBP14.14□□□□□ -0.15
NTRK3-208ENST00000557856 FKBP8Q14318 412 aa14.13□□□□□ -0.15
NTRK3-208ENST00000557856 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
NTRK3-208ENST00000557856 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
NTRK3-208ENST00000557856 TIAM1Q13009 1591 aa14.11□□□□□ -0.15
NTRK3-208ENST00000557856 MSH5O43196 834 aa14.11□□□□□ -0.15
NTRK3-208ENST00000557856 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
NTRK3-208ENST00000557856 ARID3CA6NKF2 412 aa14.1□□□□□ -0.15
NTRK3-208ENST00000557856 FHOD3Q2V2M9 1422 aa14.09□□□□□ -0.15
NTRK3-208ENST00000557856 RRBP1Q9P2E9 1410 aaKnown RBP14.09□□□□□ -0.15
NTRK3-208ENST00000557856 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
NTRK3-208ENST00000557856 KCNH8Q96L42 1107 aa14.09□□□□□ -0.15
NTRK3-208ENST00000557856 PCF11O94913 1555 aaKnown RBP14.08□□□□□ -0.16
NTRK3-208ENST00000557856 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
NTRK3-208ENST00000557856 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
NTRK3-208ENST00000557856 DNAJC5Q9H3Z4 198 aa14.06□□□□□ -0.16
NTRK3-208ENST00000557856 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
NTRK3-208ENST00000557856 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
NTRK3-208ENST00000557856 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
NTRK3-208ENST00000557856 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
NTRK3-208ENST00000557856 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
NTRK3-208ENST00000557856 FMN1Q68DA7 1419 aa14.05□□□□□ -0.16
NTRK3-208ENST00000557856 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
NTRK3-208ENST00000557856 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
NTRK3-208ENST00000557856 EIF4G3O43432 1585 aaKnown RBP14.04□□□□□ -0.16
NTRK3-208ENST00000557856 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
NTRK3-208ENST00000557856 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
NTRK3-208ENST00000557856 NEFLP07196 543 aa14.01□□□□□ -0.17
NTRK3-208ENST00000557856 ITGAEP38570 1179 aa13.99□□□□□ -0.17
NTRK3-208ENST00000557856 IQGAP2Q13576 1575 aa13.97□□□□□ -0.17
NTRK3-208ENST00000557856 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
NTRK3-208ENST00000557856 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
NTRK3-208ENST00000557856 DEKP35659 375 aaKnown RBP13.92□□□□□ -0.18
NTRK3-208ENST00000557856 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
NTRK3-208ENST00000557856 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
NTRK3-208ENST00000557856 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.18
NTRK3-208ENST00000557856 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
NTRK3-208ENST00000557856 KIAA0586Q9BVV6 1533 aa13.89□□□□□ -0.19
NTRK3-208ENST00000557856 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
NTRK3-208ENST00000557856 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
NTRK3-208ENST00000557856 MTUS2Q5JR59 1369 aa13.89□□□□□ -0.19
NTRK3-208ENST00000557856 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
NTRK3-208ENST00000557856 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
NTRK3-208ENST00000557856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
NTRK3-208ENST00000557856 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
NTRK3-208ENST00000557856 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
NTRK3-208ENST00000557856 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
NTRK3-208ENST00000557856 FAM50AQ14320 339 aaKnown RBP13.85□□□□□ -0.19
NTRK3-208ENST00000557856 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
NTRK3-208ENST00000557856 CEP170Q5SW79 1584 aa13.85□□□□□ -0.19
NTRK3-208ENST00000557856 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
NTRK3-208ENST00000557856 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.2
NTRK3-208ENST00000557856 CDK11AQ9UQ88 783 aaPredicted RBP13.82□□□□□ -0.2
NTRK3-208ENST00000557856 KIAA0556O60303 1618 aa13.82□□□□□ -0.2
NTRK3-208ENST00000557856 RAB3GAP2Q9H2M9 1393 aa13.82□□□□□ -0.2
NTRK3-208ENST00000557856 DISP1Q96F81 1524 aa13.82□□□□□ -0.2
NTRK3-208ENST00000557856 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
NTRK3-208ENST00000557856 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
NTRK3-208ENST00000557856 NCOA2Q15596 1464 aa13.81□□□□□ -0.2
NTRK3-208ENST00000557856 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
NTRK3-208ENST00000557856 CCER2I3L3R5 266 aa13.79□□□□□ -0.2
NTRK3-208ENST00000557856 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
NTRK3-208ENST00000557856 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
NTRK3-208ENST00000557856 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
NTRK3-208ENST00000557856 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
NTRK3-208ENST00000557856 ARHGEF11O15085 1522 aa13.78□□□□□ -0.2
NTRK3-208ENST00000557856 NUP160Q12769 1436 aa13.77□□□□□ -0.2
NTRK3-208ENST00000557856 ANP32CO43423 234 aa13.77□□□□□ -0.21
NTRK3-208ENST00000557856 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
NTRK3-208ENST00000557856 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
NTRK3-208ENST00000557856 PLB1Q6P1J6 1458 aa13.75□□□□□ -0.21
NTRK3-208ENST00000557856 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms