RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 CAPN15O75808 1086 aa13.41□□□□□ -0.26
NEMF-215ENST00000557380 HRCP23327 699 aa13.41□□□□□ -0.26
NEMF-215ENST00000557380 ABCA10Q8WWZ4 1543 aa13.4□□□□□ -0.26
NEMF-215ENST00000557380 IGF1RP08069 1367 aa13.4□□□□□ -0.26
NEMF-215ENST00000557380 POLA1P09884 1462 aaPredicted RBP13.39□□□□□ -0.27
NEMF-215ENST00000557380 URB2Q14146 1524 aaKnown RBP13.38□□□□□ -0.27
NEMF-215ENST00000557380 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
NEMF-215ENST00000557380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
NEMF-215ENST00000557380 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
NEMF-215ENST00000557380 VPS8Q8N3P4 1428 aa13.35□□□□□ -0.27
NEMF-215ENST00000557380 APLP2Q06481 763 aa13.34□□□□□ -0.27
NEMF-215ENST00000557380 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
NEMF-215ENST00000557380 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
NEMF-215ENST00000557380 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
NEMF-215ENST00000557380 RAD54L2Q9Y4B4 1467 aa13.32□□□□□ -0.28
NEMF-215ENST00000557380 CUL7Q14999 1698 aa13.29□□□□□ -0.28
NEMF-215ENST00000557380 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
NEMF-215ENST00000557380 ABCA5Q8WWZ7 1642 aa13.27□□□□□ -0.29
NEMF-215ENST00000557380 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
NEMF-215ENST00000557380 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
NEMF-215ENST00000557380 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
NEMF-215ENST00000557380 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
NEMF-215ENST00000557380 PPARGC1BQ86YN6 1023 aaKnown RBP13.24□□□□□ -0.29
NEMF-215ENST00000557380 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
NEMF-215ENST00000557380 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
NEMF-215ENST00000557380 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
NEMF-215ENST00000557380 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.29
NEMF-215ENST00000557380 DSG3P32926 999 aa13.2□□□□□ -0.3
NEMF-215ENST00000557380 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
NEMF-215ENST00000557380 WDR62O43379 1518 aa13.19□□□□□ -0.3
NEMF-215ENST00000557380 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
NEMF-215ENST00000557380 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
NEMF-215ENST00000557380 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
NEMF-215ENST00000557380 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.3
NEMF-215ENST00000557380 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
NEMF-215ENST00000557380 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
NEMF-215ENST00000557380 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
NEMF-215ENST00000557380 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
NEMF-215ENST00000557380 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
NEMF-215ENST00000557380 ABCB7O75027 752 aa13.1□□□□□ -0.31
NEMF-215ENST00000557380 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
NEMF-215ENST00000557380 ERCC6Q03468 1493 aa13.08□□□□□ -0.31
NEMF-215ENST00000557380 GRIN2BQ13224 1484 aa13.08□□□□□ -0.31
NEMF-215ENST00000557380 TTBK1Q5TCY1 1321 aaPredicted RBP13.07□□□□□ -0.32
NEMF-215ENST00000557380 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
NEMF-215ENST00000557380 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■■■□ 22.6
NEMF-215ENST00000557380 ZBTB22O15209 634 aa13.05□□□□□ -0.32
NEMF-215ENST00000557380 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
NEMF-215ENST00000557380 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
NEMF-215ENST00000557380 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
NEMF-215ENST00000557380 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.32
NEMF-215ENST00000557380 FMN1Q68DA7 1419 aa13.01□□□□□ -0.33
NEMF-215ENST00000557380 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
NEMF-215ENST00000557380 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
NEMF-215ENST00000557380 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
NEMF-215ENST00000557380 CFAP43Q8NDM7 1665 aa13.01□□□□□ -0.33
NEMF-215ENST00000557380 PCF11O94913 1555 aaKnown RBP13□□□□□ -0.33
NEMF-215ENST00000557380 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
NEMF-215ENST00000557380 EIF4G3O43432 1585 aaKnown RBP12.99□□□□□ -0.33
NEMF-215ENST00000557380 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
NEMF-215ENST00000557380 IQGAP2Q13576 1575 aa12.97□□□□□ -0.33
NEMF-215ENST00000557380 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.33
NEMF-215ENST00000557380 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.34
NEMF-215ENST00000557380 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
NEMF-215ENST00000557380 P3H3Q8IVL6 736 aa12.94□□□□□ -0.34
NEMF-215ENST00000557380 UGGT2Q9NYU1 1516 aa12.94□□□□□ -0.34
NEMF-215ENST00000557380 KIAA0586Q9BVV6 1533 aa12.93□□□□□ -0.34
NEMF-215ENST00000557380 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
NEMF-215ENST00000557380 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
NEMF-215ENST00000557380 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
NEMF-215ENST00000557380 POLA2Q14181 598 aa12.89□□□□□ -0.35
NEMF-215ENST00000557380 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
NEMF-215ENST00000557380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.86□□□□□ -0.35
NEMF-215ENST00000557380 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
NEMF-215ENST00000557380 PHLDB1Q86UU1 1377 aa12.85□□□□□ -0.35
NEMF-215ENST00000557380 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
NEMF-215ENST00000557380 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
NEMF-215ENST00000557380 NUP160Q12769 1436 aa12.84□□□□□ -0.35
NEMF-215ENST00000557380 KIAA0556O60303 1618 aa12.83□□□□□ -0.35
NEMF-215ENST00000557380 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
NEMF-215ENST00000557380 ATP1B4Q9UN42 357 aaPredicted RBP12.82□□□□□ -0.36
NEMF-215ENST00000557380 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
NEMF-215ENST00000557380 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
NEMF-215ENST00000557380 CHMP7Q8WUX9 453 aaPredicted RBP12.82□□□□□ -0.36
NEMF-215ENST00000557380 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
NEMF-215ENST00000557380 MTUS2Q5JR59 1369 aa12.8□□□□□ -0.36
NEMF-215ENST00000557380 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
NEMF-215ENST00000557380 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
NEMF-215ENST00000557380 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
NEMF-215ENST00000557380 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
NEMF-215ENST00000557380 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
NEMF-215ENST00000557380 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
NEMF-215ENST00000557380 DHX57Q6P158 1386 aaKnown RBP12.75□□□□□ -0.37
NEMF-215ENST00000557380 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
NEMF-215ENST00000557380 CARMIL2Q6F5E8 1435 aa12.74□□□□□ -0.37
NEMF-215ENST00000557380 MAGI3Q5TCQ9 1506 aa12.74□□□□□ -0.37
NEMF-215ENST00000557380 RAPGEF6Q8TEU7 1601 aa12.74□□□□□ -0.37
NEMF-215ENST00000557380 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
NEMF-215ENST00000557380 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.37
NEMF-215ENST00000557380 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms