RNA–Protein interactions for RNA: ENST00000557141.1

AL049779.3-201, humanhuman

BASIC

Gene AL049779.3, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049779.3-201ENST00000557141 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
AL049779.3-201ENST00000557141 CFTRP13569 1480 aa9.72□□□□□ -0.85
AL049779.3-201ENST00000557141 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
AL049779.3-201ENST00000557141 TOP2BQ02880 1626 aa9.71□□□□□ -0.85
AL049779.3-201ENST00000557141 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.86
AL049779.3-201ENST00000557141 SPDYE1Q8NFV5 336 aaPredicted RBP9.7□□□□□ -0.86
AL049779.3-201ENST00000557141 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
AL049779.3-201ENST00000557141 EVX2Q03828 476 aa9.68□□□□□ -0.86
AL049779.3-201ENST00000557141 HAX1O00165 279 aa9.67□□□□□ -0.86
AL049779.3-201ENST00000557141 CC2D2AQ9P2K1 1620 aa9.67□□□□□ -0.86
AL049779.3-201ENST00000557141 PRKAR2AP13861 404 aaKnown RBP9.66□□□□□ -0.86
AL049779.3-201ENST00000557141 KIF21BO75037 1637 aa9.66□□□□□ -0.86
AL049779.3-201ENST00000557141 LOC105371045A0A1W2PR82 267 aa9.65□□□□□ -0.86
AL049779.3-201ENST00000557141 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
AL049779.3-201ENST00000557141 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
AL049779.3-201ENST00000557141 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
AL049779.3-201ENST00000557141 CEP164Q9UPV0 1460 aa9.61□□□□□ -0.87
AL049779.3-201ENST00000557141 SOGA1O94964 1423 aa9.61□□□□□ -0.87
AL049779.3-201ENST00000557141 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
AL049779.3-201ENST00000557141 ERICH3Q5RHP9 1530 aa9.59□□□□□ -0.87
AL049779.3-201ENST00000557141 CUX1P39880 1505 aa9.57□□□□□ -0.88
AL049779.3-201ENST00000557141 LAMC3Q9Y6N6 1575 aa9.56□□□□□ -0.88
AL049779.3-201ENST00000557141 PRR29P0C7W0 189 aa9.55□□□□□ -0.88
AL049779.3-201ENST00000557141 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
AL049779.3-201ENST00000557141 CEP162Q5TB80 1403 aa9.53□□□□□ -0.88
AL049779.3-201ENST00000557141 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
AL049779.3-201ENST00000557141 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
AL049779.3-201ENST00000557141 KIF27Q86VH2 1401 aa9.52□□□□□ -0.89
AL049779.3-201ENST00000557141 FAM9AQ8IZU1 332 aaPredicted RBP9.52□□□□□ -0.89
AL049779.3-201ENST00000557141 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
AL049779.3-201ENST00000557141 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
AL049779.3-201ENST00000557141 FANCD2Q9BXW9 1451 aa9.48□□□□□ -0.89
AL049779.3-201ENST00000557141 SPDYE4A6NLX3 237 aa9.46□□□□□ -0.9
AL049779.3-201ENST00000557141 HRCP23327 699 aa9.44□□□□□ -0.9
AL049779.3-201ENST00000557141 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
AL049779.3-201ENST00000557141 FGD5Q6ZNL6 1462 aa9.43□□□□□ -0.9
AL049779.3-201ENST00000557141 RAPGEF2Q9Y4G8 1499 aa9.43□□□□□ -0.9
AL049779.3-201ENST00000557141 PDS5BQ9NTI5 1447 aa9.43□□□□□ -0.9
AL049779.3-201ENST00000557141 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
AL049779.3-201ENST00000557141 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
AL049779.3-201ENST00000557141 CLIP1P30622 1438 aa9.41□□□□□ -0.9
AL049779.3-201ENST00000557141 VPS8Q8N3P4 1428 aa9.41□□□□□ -0.9
AL049779.3-201ENST00000557141 FARP1Q9Y4F1 1045 aaPredicted RBP9.41□□□□□ -0.9
AL049779.3-201ENST00000557141 CUL7Q14999 1698 aa9.39□□□□□ -0.91
AL049779.3-201ENST00000557141 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
AL049779.3-201ENST00000557141 GABBR2O75899 941 aa9.39□□□□□ -0.91
AL049779.3-201ENST00000557141 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
AL049779.3-201ENST00000557141 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
AL049779.3-201ENST00000557141 CUX2O14529 1486 aa9.38□□□□□ -0.91
AL049779.3-201ENST00000557141 POLA1P09884 1462 aaPredicted RBP9.38□□□□□ -0.91
AL049779.3-201ENST00000557141 IGF1RP08069 1367 aa9.37□□□□□ -0.91
AL049779.3-201ENST00000557141 ABCA5Q8WWZ7 1642 aa9.34□□□□□ -0.91
AL049779.3-201ENST00000557141 ZEB1P37275 1124 aaPredicted RBP9.34□□□□□ -0.91
AL049779.3-201ENST00000557141 URB2Q14146 1524 aaKnown RBP9.34□□□□□ -0.91
AL049779.3-201ENST00000557141 NESP48681 1621 aa9.34□□□□□ -0.91
AL049779.3-201ENST00000557141 MAP3K1Q13233 1512 aa9.33□□□□□ -0.92
AL049779.3-201ENST00000557141 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
AL049779.3-201ENST00000557141 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
AL049779.3-201ENST00000557141 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
AL049779.3-201ENST00000557141 EFCAB5A4FU69 1503 aa9.31□□□□□ -0.92
AL049779.3-201ENST00000557141 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
AL049779.3-201ENST00000557141 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
AL049779.3-201ENST00000557141 TARBP1Q13395 1621 aaKnown RBP9.29□□□□□ -0.92
AL049779.3-201ENST00000557141 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
AL049779.3-201ENST00000557141 PROM2Q8N271 834 aa9.28□□□□□ -0.92
AL049779.3-201ENST00000557141 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
AL049779.3-201ENST00000557141 WDR62O43379 1518 aa9.27□□□□□ -0.93
AL049779.3-201ENST00000557141 CTTNBP2Q8WZ74 1663 aa9.26□□□□□ -0.93
AL049779.3-201ENST00000557141 AQRO60306 1485 aaKnown RBP eCLIP9.26□□□□□ -0.93
AL049779.3-201ENST00000557141 FHAD1B1AJZ9 1412 aa9.25□□□□□ -0.93
AL049779.3-201ENST00000557141 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
AL049779.3-201ENST00000557141 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
AL049779.3-201ENST00000557141 RAD54L2Q9Y4B4 1467 aa9.25□□□□□ -0.93
AL049779.3-201ENST00000557141 GAPVD1Q14C86 1478 aa9.24□□□□□ -0.93
AL049779.3-201ENST00000557141 IFT140Q96RY7 1462 aa9.22□□□□□ -0.93
AL049779.3-201ENST00000557141 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
AL049779.3-201ENST00000557141 SAMD9Q5K651 1589 aa9.21□□□□□ -0.93
AL049779.3-201ENST00000557141 THOC2Q8NI27 1593 aaKnown RBP9.2□□□□□ -0.94
AL049779.3-201ENST00000557141 PBRM1Q86U86 1689 aa9.2□□□□□ -0.94
AL049779.3-201ENST00000557141 FYCO1Q9BQS8 1478 aa9.2□□□□□ -0.94
AL049779.3-201ENST00000557141 CFAP43Q8NDM7 1665 aa9.2□□□□□ -0.94
AL049779.3-201ENST00000557141 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
AL049779.3-201ENST00000557141 RRBP1Q9P2E9 1410 aaKnown RBP9.19□□□□□ -0.94
AL049779.3-201ENST00000557141 ADAMTS12P58397 1594 aa9.19□□□□□ -0.94
AL049779.3-201ENST00000557141 TIAM1Q13009 1591 aa9.19□□□□□ -0.94
AL049779.3-201ENST00000557141 GRIN2BQ13224 1484 aa9.18□□□□□ -0.94
AL049779.3-201ENST00000557141 FMN1Q68DA7 1419 aa9.18□□□□□ -0.94
AL049779.3-201ENST00000557141 CASKIN1Q8WXD9 1431 aa9.16□□□□□ -0.94
AL049779.3-201ENST00000557141 TDRD9Q8NDG6 1382 aaKnown RBP9.13□□□□□ -0.95
AL049779.3-201ENST00000557141 PCF11O94913 1555 aaKnown RBP9.13□□□□□ -0.95
AL049779.3-201ENST00000557141 GALR2O43603 387 aaPredicted RBP9.13□□□□□ -0.95
AL049779.3-201ENST00000557141 MAGI1Q96QZ7 1491 aaPredicted RBP9.13□□□□□ -0.95
AL049779.3-201ENST00000557141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 CLSPNQ9HAW4 1339 aa9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 CLCN6P51797 869 aa9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 LHX8Q68G74 356 aa9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 SNAPC4Q5SXM2 1469 aa9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 LRRC9Q6ZRR7 1453 aa9.12□□□□□ -0.95
AL049779.3-201ENST00000557141 IQGAP2Q13576 1575 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms