RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
PCNX1-213ENST00000556846 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
PCNX1-213ENST00000556846 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
PCNX1-213ENST00000556846 ABCB7O75027 752 aa12.65□□□□□ -0.38
PCNX1-213ENST00000556846 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
PCNX1-213ENST00000556846 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
PCNX1-213ENST00000556846 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
PCNX1-213ENST00000556846 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
PCNX1-213ENST00000556846 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
PCNX1-213ENST00000556846 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
PCNX1-213ENST00000556846 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
PCNX1-213ENST00000556846 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
PCNX1-213ENST00000556846 CHD1O14646 1710 aa12.6□□□□□ -0.39
PCNX1-213ENST00000556846 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
PCNX1-213ENST00000556846 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
PCNX1-213ENST00000556846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
PCNX1-213ENST00000556846 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
PCNX1-213ENST00000556846 KCNA4P22459 653 aa12.57□□□□□ -0.4
PCNX1-213ENST00000556846 SYNJ2O15056 1496 aa12.57□□□□□ -0.4
PCNX1-213ENST00000556846 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
PCNX1-213ENST00000556846 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
PCNX1-213ENST00000556846 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
PCNX1-213ENST00000556846 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
PCNX1-213ENST00000556846 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
PCNX1-213ENST00000556846 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
PCNX1-213ENST00000556846 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
PCNX1-213ENST00000556846 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
PCNX1-213ENST00000556846 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
PCNX1-213ENST00000556846 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
PCNX1-213ENST00000556846 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
PCNX1-213ENST00000556846 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
PCNX1-213ENST00000556846 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
PCNX1-213ENST00000556846 ADAMTS12P58397 1594 aa12.39□□□□□ -0.43
PCNX1-213ENST00000556846 NUP160Q12769 1436 aa12.39□□□□□ -0.43
PCNX1-213ENST00000556846 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
PCNX1-213ENST00000556846 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
PCNX1-213ENST00000556846 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
PCNX1-213ENST00000556846 IGF1RP08069 1367 aa12.34□□□□□ -0.43
PCNX1-213ENST00000556846 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
PCNX1-213ENST00000556846 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
PCNX1-213ENST00000556846 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
PCNX1-213ENST00000556846 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCNX1-213ENST00000556846 POLA2Q14181 598 aa12.28□□□□□ -0.44
PCNX1-213ENST00000556846 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
PCNX1-213ENST00000556846 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
PCNX1-213ENST00000556846 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
PCNX1-213ENST00000556846 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
PCNX1-213ENST00000556846 HAX1O00165 279 aa12.24□□□□□ -0.45
PCNX1-213ENST00000556846 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
PCNX1-213ENST00000556846 CUL7Q14999 1698 aa12.22□□□□□ -0.45
PCNX1-213ENST00000556846 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
PCNX1-213ENST00000556846 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
PCNX1-213ENST00000556846 PTPRGP23470 1445 aa12.18□□□□□ -0.46
PCNX1-213ENST00000556846 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
PCNX1-213ENST00000556846 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
PCNX1-213ENST00000556846 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
PCNX1-213ENST00000556846 TNIKQ9UKE5 1360 aa12.14□□□□□ -0.47
PCNX1-213ENST00000556846 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
PCNX1-213ENST00000556846 IQGAP2Q13576 1575 aa12.1□□□□□ -0.47
PCNX1-213ENST00000556846 ABCC10Q5T3U5 1492 aa12.08□□□□□ -0.47
PCNX1-213ENST00000556846 LHX8Q68G74 356 aa12.08□□□□□ -0.48
PCNX1-213ENST00000556846 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
PCNX1-213ENST00000556846 FAM9AQ8IZU1 332 aaPredicted RBP12.07□□□□□ -0.48
PCNX1-213ENST00000556846 MAPKBP1O60336 1514 aa12.06□□□□□ -0.48
PCNX1-213ENST00000556846 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
PCNX1-213ENST00000556846 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
PCNX1-213ENST00000556846 DISP1Q96F81 1524 aa12.04□□□□□ -0.48
PCNX1-213ENST00000556846 ABCC2Q92887 1545 aa12.03□□□□□ -0.48
PCNX1-213ENST00000556846 UGGT2Q9NYU1 1516 aa12.02□□□□□ -0.48
PCNX1-213ENST00000556846 EVX2Q03828 476 aa12.02□□□□□ -0.49
PCNX1-213ENST00000556846 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
PCNX1-213ENST00000556846 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
PCNX1-213ENST00000556846 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
PCNX1-213ENST00000556846 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
PCNX1-213ENST00000556846 P3H3Q8IVL6 736 aa12□□□□□ -0.49
PCNX1-213ENST00000556846 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
PCNX1-213ENST00000556846 GOLGA3Q08378 1498 aa12□□□□□ -0.49
PCNX1-213ENST00000556846 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
PCNX1-213ENST00000556846 PRXQ9BXM0 1461 aa12□□□□□ -0.49
PCNX1-213ENST00000556846 DIP2BQ9P265 1576 aa12□□□□□ -0.49
PCNX1-213ENST00000556846 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
PCNX1-213ENST00000556846 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
PCNX1-213ENST00000556846 KIAA0556O60303 1618 aa11.97□□□□□ -0.49
PCNX1-213ENST00000556846 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
PCNX1-213ENST00000556846 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
PCNX1-213ENST00000556846 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
PCNX1-213ENST00000556846 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
PCNX1-213ENST00000556846 EEA1Q15075 1411 aa11.93□□□□□ -0.5
PCNX1-213ENST00000556846 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
PCNX1-213ENST00000556846 KDM6BO15054 1643 aa11.92□□□□□ -0.5
PCNX1-213ENST00000556846 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
PCNX1-213ENST00000556846 EPRSP07814 1512 aaKnown RBP11.91□□□□□ -0.5
PCNX1-213ENST00000556846 GLI2P10070 1586 aa11.9□□□□□ -0.5
PCNX1-213ENST00000556846 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCNX1-213ENST00000556846 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
PCNX1-213ENST00000556846 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
PCNX1-213ENST00000556846 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
PCNX1-213ENST00000556846 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
PCNX1-213ENST00000556846 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
PCNX1-213ENST00000556846 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms