RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, humanhuman

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-212ENST00000556029 CFTRP13569 1480 aa17.41■□□□□ 0.38
TMPO-212ENST00000556029 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.37
TMPO-212ENST00000556029 ARHGAP35Q9NRY4 1499 aa17.38■□□□□ 0.37
TMPO-212ENST00000556029 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
TMPO-212ENST00000556029 IGF1RP08069 1367 aa17.35■□□□□ 0.37
TMPO-212ENST00000556029 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
TMPO-212ENST00000556029 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
TMPO-212ENST00000556029 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
TMPO-212ENST00000556029 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
TMPO-212ENST00000556029 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
TMPO-212ENST00000556029 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
TMPO-212ENST00000556029 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
TMPO-212ENST00000556029 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
TMPO-212ENST00000556029 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
TMPO-212ENST00000556029 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
TMPO-212ENST00000556029 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
TMPO-212ENST00000556029 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
TMPO-212ENST00000556029 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
TMPO-212ENST00000556029 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
TMPO-212ENST00000556029 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
TMPO-212ENST00000556029 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
TMPO-212ENST00000556029 PHLDB1Q86UU1 1377 aa17.2■□□□□ 0.34
TMPO-212ENST00000556029 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
TMPO-212ENST00000556029 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
TMPO-212ENST00000556029 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
TMPO-212ENST00000556029 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
TMPO-212ENST00000556029 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
TMPO-212ENST00000556029 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
TMPO-212ENST00000556029 KCNH8Q96L42 1107 aa17.13■□□□□ 0.33
TMPO-212ENST00000556029 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
TMPO-212ENST00000556029 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
TMPO-212ENST00000556029 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
TMPO-212ENST00000556029 ANP32CO43423 234 aa17.11■□□□□ 0.33
TMPO-212ENST00000556029 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
TMPO-212ENST00000556029 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
TMPO-212ENST00000556029 TIMELESSQ9UNS1 1208 aa17.09■□□□□ 0.33
TMPO-212ENST00000556029 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
TMPO-212ENST00000556029 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
TMPO-212ENST00000556029 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
TMPO-212ENST00000556029 PCF11O94913 1555 aaKnown RBP17.04■□□□□ 0.32
TMPO-212ENST00000556029 PPP1R15AO75807 674 aaPredicted RBP17.04■□□□□ 0.32
TMPO-212ENST00000556029 FKBP8Q14318 412 aa17.04■□□□□ 0.32
TMPO-212ENST00000556029 FMN1Q68DA7 1419 aa17.02■□□□□ 0.32
TMPO-212ENST00000556029 PRDM2Q13029 1718 aa17.02■□□□□ 0.31
TMPO-212ENST00000556029 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
TMPO-212ENST00000556029 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
TMPO-212ENST00000556029 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
TMPO-212ENST00000556029 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
TMPO-212ENST00000556029 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
TMPO-212ENST00000556029 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
TMPO-212ENST00000556029 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
TMPO-212ENST00000556029 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
TMPO-212ENST00000556029 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.31
TMPO-212ENST00000556029 NESP48681 1621 aa16.96■□□□□ 0.31
TMPO-212ENST00000556029 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
TMPO-212ENST00000556029 CCER2I3L3R5 266 aa16.92■□□□□ 0.3
TMPO-212ENST00000556029 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
TMPO-212ENST00000556029 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
TMPO-212ENST00000556029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.38e-7■■■■□ 19.5
TMPO-212ENST00000556029 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
TMPO-212ENST00000556029 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
TMPO-212ENST00000556029 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
TMPO-212ENST00000556029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.31e-6■■□□□ 11.7
TMPO-212ENST00000556029 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.33e-6■■■■□ 24.3
TMPO-212ENST00000556029 CUL7Q14999 1698 aa16.87■□□□□ 0.29
TMPO-212ENST00000556029 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
TMPO-212ENST00000556029 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
TMPO-212ENST00000556029 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
TMPO-212ENST00000556029 MYOM3Q5VTT5 1437 aa16.84■□□□□ 0.29
TMPO-212ENST00000556029 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMPO-212ENST00000556029 HFM1A2PYH4 1435 aa16.83■□□□□ 0.29
TMPO-212ENST00000556029 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
TMPO-212ENST00000556029 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
TMPO-212ENST00000556029 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
TMPO-212ENST00000556029 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
TMPO-212ENST00000556029 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
TMPO-212ENST00000556029 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
TMPO-212ENST00000556029 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
TMPO-212ENST00000556029 CTTNBP2Q8WZ74 1663 aa16.79■□□□□ 0.28
TMPO-212ENST00000556029 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
TMPO-212ENST00000556029 NAIPQ13075 1403 aa16.78■□□□□ 0.28
TMPO-212ENST00000556029 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
TMPO-212ENST00000556029 HSPA5P11021 654 aaKnown RBP16.78■□□□□ 0.28
TMPO-212ENST00000556029 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.28
TMPO-212ENST00000556029 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
TMPO-212ENST00000556029 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
TMPO-212ENST00000556029 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
TMPO-212ENST00000556029 FOXD1Q16676 465 aa16.73■□□□□ 0.27
TMPO-212ENST00000556029 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
TMPO-212ENST00000556029 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
TMPO-212ENST00000556029 MPHOSPH9Q99550 1183 aa16.73■□□□□ 0.27
TMPO-212ENST00000556029 NBR1Q14596 966 aa16.72■□□□□ 0.27
TMPO-212ENST00000556029 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
TMPO-212ENST00000556029 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
TMPO-212ENST00000556029 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
TMPO-212ENST00000556029 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
TMPO-212ENST00000556029 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
TMPO-212ENST00000556029 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
TMPO-212ENST00000556029 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
TMPO-212ENST00000556029 SENP3-EIF4A1A0A087X0R7 540 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms