RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SOGA1O94964 1423 aa17.29■□□□□ 0.36
PRKCH-218ENST00000555628 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
PRKCH-218ENST00000555628 CUX1P39880 1505 aa17.25■□□□□ 0.35
PRKCH-218ENST00000555628 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
PRKCH-218ENST00000555628 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
PRKCH-218ENST00000555628 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
PRKCH-218ENST00000555628 PBRM1Q86U86 1689 aa17.18■□□□□ 0.34
PRKCH-218ENST00000555628 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
PRKCH-218ENST00000555628 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
PRKCH-218ENST00000555628 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
PRKCH-218ENST00000555628 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
PRKCH-218ENST00000555628 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
PRKCH-218ENST00000555628 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
PRKCH-218ENST00000555628 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
PRKCH-218ENST00000555628 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
PRKCH-218ENST00000555628 NUP160Q12769 1436 aa17.04■□□□□ 0.32
PRKCH-218ENST00000555628 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
PRKCH-218ENST00000555628 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
PRKCH-218ENST00000555628 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
PRKCH-218ENST00000555628 KIF13AQ9H1H9 1805 aa17.01■□□□□ 0.31
PRKCH-218ENST00000555628 ZBTB22O15209 634 aa16.9■□□□□ 0.3
PRKCH-218ENST00000555628 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
PRKCH-218ENST00000555628 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
PRKCH-218ENST00000555628 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
PRKCH-218ENST00000555628 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
PRKCH-218ENST00000555628 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
PRKCH-218ENST00000555628 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
PRKCH-218ENST00000555628 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
PRKCH-218ENST00000555628 ABCC10Q5T3U5 1492 aa16.82■□□□□ 0.28
PRKCH-218ENST00000555628 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
PRKCH-218ENST00000555628 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
PRKCH-218ENST00000555628 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-218ENST00000555628 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
PRKCH-218ENST00000555628 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
PRKCH-218ENST00000555628 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
PRKCH-218ENST00000555628 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
PRKCH-218ENST00000555628 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
PRKCH-218ENST00000555628 KDM6BO15054 1643 aa16.69■□□□□ 0.26
PRKCH-218ENST00000555628 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
PRKCH-218ENST00000555628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
PRKCH-218ENST00000555628 CAPN15O75808 1086 aa16.64■□□□□ 0.25
PRKCH-218ENST00000555628 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
PRKCH-218ENST00000555628 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-218ENST00000555628 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
PRKCH-218ENST00000555628 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
PRKCH-218ENST00000555628 TSPOAP1O95153 1857 aa16.6■□□□□ 0.25
PRKCH-218ENST00000555628 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
PRKCH-218ENST00000555628 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
PRKCH-218ENST00000555628 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
PRKCH-218ENST00000555628 GLI2P10070 1586 aa16.54■□□□□ 0.24
PRKCH-218ENST00000555628 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRKCH-218ENST00000555628 CUL7Q14999 1698 aa16.53■□□□□ 0.24
PRKCH-218ENST00000555628 IGF1RP08069 1367 aa16.51■□□□□ 0.23
PRKCH-218ENST00000555628 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
PRKCH-218ENST00000555628 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
PRKCH-218ENST00000555628 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
PRKCH-218ENST00000555628 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-218ENST00000555628 APLP2Q06481 763 aa16.48■□□□□ 0.23
PRKCH-218ENST00000555628 ASXL2Q76L83 1435 aa16.46■□□□□ 0.23
PRKCH-218ENST00000555628 DSG3P32926 999 aa16.46■□□□□ 0.23
PRKCH-218ENST00000555628 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
PRKCH-218ENST00000555628 PTPRGP23470 1445 aa16.45■□□□□ 0.22
PRKCH-218ENST00000555628 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
PRKCH-218ENST00000555628 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
PRKCH-218ENST00000555628 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
PRKCH-218ENST00000555628 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
PRKCH-218ENST00000555628 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
PRKCH-218ENST00000555628 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
PRKCH-218ENST00000555628 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
PRKCH-218ENST00000555628 DISP1Q96F81 1524 aa16.4■□□□□ 0.22
PRKCH-218ENST00000555628 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
PRKCH-218ENST00000555628 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
PRKCH-218ENST00000555628 KDM5BQ9UGL1 1544 aa16.39■□□□□ 0.21
PRKCH-218ENST00000555628 ABCB7O75027 752 aa16.36■□□□□ 0.21
PRKCH-218ENST00000555628 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
PRKCH-218ENST00000555628 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
PRKCH-218ENST00000555628 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
PRKCH-218ENST00000555628 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
PRKCH-218ENST00000555628 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
PRKCH-218ENST00000555628 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
PRKCH-218ENST00000555628 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
PRKCH-218ENST00000555628 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
PRKCH-218ENST00000555628 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
PRKCH-218ENST00000555628 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
PRKCH-218ENST00000555628 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
PRKCH-218ENST00000555628 POLA2Q14181 598 aa16.21■□□□□ 0.19
PRKCH-218ENST00000555628 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
PRKCH-218ENST00000555628 ABCA8O94911 1581 aa16.17■□□□□ 0.18
PRKCH-218ENST00000555628 KIF21BO75037 1637 aa16.17■□□□□ 0.18
PRKCH-218ENST00000555628 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
PRKCH-218ENST00000555628 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
PRKCH-218ENST00000555628 ADAMTSL3P82987 1691 aa16.12■□□□□ 0.17
PRKCH-218ENST00000555628 ARAP3Q8WWN8 1544 aa16.12■□□□□ 0.17
PRKCH-218ENST00000555628 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
PRKCH-218ENST00000555628 FBXO41Q8TF61 875 aa16.09■□□□□ 0.17
PRKCH-218ENST00000555628 PTPRMP28827 1452 aa16.06■□□□□ 0.16
PRKCH-218ENST00000555628 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
PRKCH-218ENST00000555628 FRMPD1Q5SYB0 1578 aa16.04■□□□□ 0.16
PRKCH-218ENST00000555628 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
PRKCH-218ENST00000555628 BCORL1Q5H9F3 1711 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms