RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
HNRNPC-210ENST00000554417 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
HNRNPC-210ENST00000554417 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
HNRNPC-210ENST00000554417 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-210ENST00000554417 WDR62O43379 1518 aa12.48□□□□□ -0.41
HNRNPC-210ENST00000554417 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
HNRNPC-210ENST00000554417 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-210ENST00000554417 THOC2Q8NI27 1593 aaKnown RBP12.46□□□□□ -0.42
HNRNPC-210ENST00000554417 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
HNRNPC-210ENST00000554417 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
HNRNPC-210ENST00000554417 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-210ENST00000554417 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
HNRNPC-210ENST00000554417 GABBR2O75899 941 aa12.39□□□□□ -0.43
HNRNPC-210ENST00000554417 SPDYE1Q8NFV5 336 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-210ENST00000554417 LHX8Q68G74 356 aa12.38□□□□□ -0.43
HNRNPC-210ENST00000554417 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
HNRNPC-210ENST00000554417 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
HNRNPC-210ENST00000554417 CUX1P39880 1505 aa12.35□□□□□ -0.43
HNRNPC-210ENST00000554417 TOP2BQ02880 1626 aa12.34□□□□□ -0.43
HNRNPC-210ENST00000554417 FBLN2P98095 1184 aa12.34□□□□□ -0.43
HNRNPC-210ENST00000554417 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
HNRNPC-210ENST00000554417 SOGA1O94964 1423 aa12.34□□□□□ -0.43
HNRNPC-210ENST00000554417 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-210ENST00000554417 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
HNRNPC-210ENST00000554417 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
HNRNPC-210ENST00000554417 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
HNRNPC-210ENST00000554417 WDR97A6NE52 1622 aa12.3□□□□□ -0.44
HNRNPC-210ENST00000554417 ZBTB22O15209 634 aa12.3□□□□□ -0.44
HNRNPC-210ENST00000554417 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
HNRNPC-210ENST00000554417 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
HNRNPC-210ENST00000554417 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
HNRNPC-210ENST00000554417 TARBP1Q13395 1621 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-210ENST00000554417 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-210ENST00000554417 RAD54L2Q9Y4B4 1467 aa12.22□□□□□ -0.45
HNRNPC-210ENST00000554417 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
HNRNPC-210ENST00000554417 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-210ENST00000554417 TDRD9Q8NDG6 1382 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-210ENST00000554417 GAPVD1Q14C86 1478 aa12.19□□□□□ -0.46
HNRNPC-210ENST00000554417 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
HNRNPC-210ENST00000554417 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
HNRNPC-210ENST00000554417 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
HNRNPC-210ENST00000554417 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.463e-13■■■■□ 22.9
HNRNPC-210ENST00000554417 EEA1Q15075 1411 aa12.15□□□□□ -0.46
HNRNPC-210ENST00000554417 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
HNRNPC-210ENST00000554417 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-210ENST00000554417 EIF4G3O43432 1585 aaKnown RBP12.14□□□□□ -0.47
HNRNPC-210ENST00000554417 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
HNRNPC-210ENST00000554417 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
HNRNPC-210ENST00000554417 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-210ENST00000554417 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
HNRNPC-210ENST00000554417 IGF1RP08069 1367 aa12.08□□□□□ -0.48
HNRNPC-210ENST00000554417 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
HNRNPC-210ENST00000554417 SYNJ2O15056 1496 aa12.08□□□□□ -0.48
HNRNPC-210ENST00000554417 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
HNRNPC-210ENST00000554417 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
HNRNPC-210ENST00000554417 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
HNRNPC-210ENST00000554417 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-210ENST00000554417 CLCN6P51797 869 aa12.04□□□□□ -0.48
HNRNPC-210ENST00000554417 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
HNRNPC-210ENST00000554417 CUL7Q14999 1698 aa12.03□□□□□ -0.48
HNRNPC-210ENST00000554417 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
HNRNPC-210ENST00000554417 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-210ENST00000554417 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
HNRNPC-210ENST00000554417 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
HNRNPC-210ENST00000554417 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
HNRNPC-210ENST00000554417 RUSC2Q8N2Y8 1516 aa11.96□□□□□ -0.5
HNRNPC-210ENST00000554417 PRXQ9BXM0 1461 aa11.95□□□□□ -0.5
HNRNPC-210ENST00000554417 NUP160Q12769 1436 aa11.94□□□□□ -0.5
HNRNPC-210ENST00000554417 FAM9AQ8IZU1 332 aaPredicted RBP11.91□□□□□ -0.5
HNRNPC-210ENST00000554417 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
HNRNPC-210ENST00000554417 CHD1O14646 1710 aa11.91□□□□□ -0.5
HNRNPC-210ENST00000554417 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
HNRNPC-210ENST00000554417 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
HNRNPC-210ENST00000554417 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-210ENST00000554417 KIF21BO75037 1637 aa11.88□□□□□ -0.51
HNRNPC-210ENST00000554417 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
HNRNPC-210ENST00000554417 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
HNRNPC-210ENST00000554417 CLASP1Q7Z460 1538 aa11.86□□□□□ -0.51
HNRNPC-210ENST00000554417 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-210ENST00000554417 CARMIL2Q6F5E8 1435 aa11.84□□□□□ -0.51
HNRNPC-210ENST00000554417 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
HNRNPC-210ENST00000554417 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
HNRNPC-210ENST00000554417 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
HNRNPC-210ENST00000554417 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
HNRNPC-210ENST00000554417 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-210ENST00000554417 UGGT2Q9NYU1 1516 aa11.77□□□□□ -0.52
HNRNPC-210ENST00000554417 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
HNRNPC-210ENST00000554417 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
HNRNPC-210ENST00000554417 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
HNRNPC-210ENST00000554417 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
HNRNPC-210ENST00000554417 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-210ENST00000554417 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
HNRNPC-210ENST00000554417 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
HNRNPC-210ENST00000554417 PTPRGP23470 1445 aa11.7□□□□□ -0.54
HNRNPC-210ENST00000554417 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
HNRNPC-210ENST00000554417 RIMBP3CA6NJZ7 1639 aa11.69□□□□□ -0.54
HNRNPC-210ENST00000554417 RIMBP3BA6NNM3 1639 aa11.69□□□□□ -0.54
HNRNPC-210ENST00000554417 RIMBP3Q9UFD9 1639 aa11.69□□□□□ -0.54
HNRNPC-210ENST00000554417 POTEMA6NI47 508 aa11.69□□□□□ -0.54
HNRNPC-210ENST00000554417 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms