RNA–Protein interactions for RNA: ENST00000554307.1

AF123462.1-201, humanhuman

TSL 3 BASIC

Gene AF123462.1, Length 446 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF123462.1-201ENST00000554307 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
AF123462.1-201ENST00000554307 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
AF123462.1-201ENST00000554307 TOP2AP11388 1531 aaKnown RBP7.93□□□□□ -1.14
AF123462.1-201ENST00000554307 SSUH2Q9Y2M2 353 aa7.9□□□□□ -1.14
AF123462.1-201ENST00000554307 PROM2Q8N271 834 aa7.88□□□□□ -1.15
AF123462.1-201ENST00000554307 AKT1S1Q96B36 256 aa7.87□□□□□ -1.15
AF123462.1-201ENST00000554307 URB2Q14146 1524 aaKnown RBP7.87□□□□□ -1.15
AF123462.1-201ENST00000554307 CCDC88BA6NC98 1476 aa7.85□□□□□ -1.15
AF123462.1-201ENST00000554307 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
AF123462.1-201ENST00000554307 CHRDL2Q6WN34 429 aa7.81□□□□□ -1.16
AF123462.1-201ENST00000554307 TRIM41Q8WV44 630 aa7.81□□□□□ -1.16
AF123462.1-201ENST00000554307 IFT140Q96RY7 1462 aa7.8□□□□□ -1.16
AF123462.1-201ENST00000554307 REM2Q8IYK8 340 aaPredicted RBP7.79□□□□□ -1.16
AF123462.1-201ENST00000554307 FBXO3Q9UK99 471 aa7.79□□□□□ -1.16
AF123462.1-201ENST00000554307 ABCC8Q09428 1581 aa7.79□□□□□ -1.16
AF123462.1-201ENST00000554307 TOPBP1Q92547 1522 aa7.78□□□□□ -1.16
AF123462.1-201ENST00000554307 ZNF608Q9ULD9 1512 aaPredicted RBP7.77□□□□□ -1.17
AF123462.1-201ENST00000554307 SPDYE1Q8NFV5 336 aaPredicted RBP7.76□□□□□ -1.17
AF123462.1-201ENST00000554307 DNMBPQ6XZF7 1577 aa7.75□□□□□ -1.17
AF123462.1-201ENST00000554307 CLEC11AQ9Y240 323 aa7.74□□□□□ -1.17
AF123462.1-201ENST00000554307 AMER1Q5JTC6 1135 aaPredicted RBP7.72□□□□□ -1.17
AF123462.1-201ENST00000554307 STAG3Q9UJ98 1225 aa7.72□□□□□ -1.17
AF123462.1-201ENST00000554307 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.17
AF123462.1-201ENST00000554307 TARBP1Q13395 1621 aaKnown RBP7.71□□□□□ -1.17
AF123462.1-201ENST00000554307 PITPNM1O00562 1244 aa7.71□□□□□ -1.18
AF123462.1-201ENST00000554307 AQRO60306 1485 aaKnown RBP eCLIP7.7□□□□□ -1.18
AF123462.1-201ENST00000554307 POLA1P09884 1462 aaPredicted RBP7.7□□□□□ -1.18
AF123462.1-201ENST00000554307 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
AF123462.1-201ENST00000554307 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
AF123462.1-201ENST00000554307 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
AF123462.1-201ENST00000554307 ARHGEF11O15085 1522 aa7.68□□□□□ -1.18
AF123462.1-201ENST00000554307 SOGA1O94964 1423 aa7.68□□□□□ -1.18
AF123462.1-201ENST00000554307 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
AF123462.1-201ENST00000554307 RAD54L2Q9Y4B4 1467 aa7.66□□□□□ -1.18
AF123462.1-201ENST00000554307 WDR97A6NE52 1622 aa7.66□□□□□ -1.18
AF123462.1-201ENST00000554307 PRR29P0C7W0 189 aa7.65□□□□□ -1.18
AF123462.1-201ENST00000554307 FGD5Q6ZNL6 1462 aa7.65□□□□□ -1.18
AF123462.1-201ENST00000554307 TDRD9Q8NDG6 1382 aaKnown RBP7.65□□□□□ -1.18
AF123462.1-201ENST00000554307 SP7Q8TDD2 431 aaPredicted RBP7.65□□□□□ -1.18
AF123462.1-201ENST00000554307 RTN4Q9NQC3 1192 aaKnown RBP7.65□□□□□ -1.18
AF123462.1-201ENST00000554307 CHD1O14646 1710 aa7.64□□□□□ -1.19
AF123462.1-201ENST00000554307 CUX1P39880 1505 aa7.63□□□□□ -1.19
AF123462.1-201ENST00000554307 CYB5RLQ6IPT4 315 aa7.63□□□□□ -1.19
AF123462.1-201ENST00000554307 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
AF123462.1-201ENST00000554307 SNAPC4Q5SXM2 1469 aa7.62□□□□□ -1.19
AF123462.1-201ENST00000554307 MAGI1Q96QZ7 1491 aaPredicted RBP7.62□□□□□ -1.19
AF123462.1-201ENST00000554307 ARAP1Q96P48 1450 aa7.61□□□□□ -1.19
AF123462.1-201ENST00000554307 PLCD3Q8N3E9 789 aa7.6□□□□□ -1.19
AF123462.1-201ENST00000554307 CHMP7Q8WUX9 453 aaPredicted RBP7.6□□□□□ -1.19
AF123462.1-201ENST00000554307 CLASP1Q7Z460 1538 aa7.59□□□□□ -1.19
AF123462.1-201ENST00000554307 MIER1Q8N108 512 aa7.59□□□□□ -1.19
AF123462.1-201ENST00000554307 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
AF123462.1-201ENST00000554307 SYNJ2O15056 1496 aa7.59□□□□□ -1.19
AF123462.1-201ENST00000554307 SYNJ1O43426 1573 aa7.59□□□□□ -1.2
AF123462.1-201ENST00000554307 PLEKHG5O94827 1062 aa7.58□□□□□ -1.2
AF123462.1-201ENST00000554307 ABCA10Q8WWZ4 1543 aa7.57□□□□□ -1.2
AF123462.1-201ENST00000554307 GAPVD1Q14C86 1478 aa7.57□□□□□ -1.2
AF123462.1-201ENST00000554307 SUPT5HO00267 1087 aaKnown RBP7.57□□□□□ -1.2
AF123462.1-201ENST00000554307 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
AF123462.1-201ENST00000554307 ABCA5Q8WWZ7 1642 aa7.55□□□□□ -1.2
AF123462.1-201ENST00000554307 PBRM1Q86U86 1689 aa7.54□□□□□ -1.2
AF123462.1-201ENST00000554307 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
AF123462.1-201ENST00000554307 PRKAR2AP13861 404 aaKnown RBP7.53□□□□□ -1.2
AF123462.1-201ENST00000554307 FXR2P51116 673 aaKnown RBP eCLIP7.53□□□□□ -1.2
AF123462.1-201ENST00000554307 CHADLQ6NUI6 762 aa7.53□□□□□ -1.2
AF123462.1-201ENST00000554307 CREBZFQ9NS37 354 aa7.53□□□□□ -1.2
AF123462.1-201ENST00000554307 KLHL34Q8N239 644 aa7.52□□□□□ -1.21
AF123462.1-201ENST00000554307 TOP2BQ02880 1626 aa7.52□□□□□ -1.21
AF123462.1-201ENST00000554307 GRIN2AQ12879 1464 aa7.51□□□□□ -1.21
AF123462.1-201ENST00000554307 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
AF123462.1-201ENST00000554307 BIVM-ERCC5R4GMW8 1640 aa7.51□□□□□ -1.21
AF123462.1-201ENST00000554307 HAX1O00165 279 aa7.5□□□□□ -1.21
AF123462.1-201ENST00000554307 NUP160Q12769 1436 aa7.5□□□□□ -1.21
AF123462.1-201ENST00000554307 FHAD1B1AJZ9 1412 aa7.49□□□□□ -1.21
AF123462.1-201ENST00000554307 ADAMTS12P58397 1594 aa7.49□□□□□ -1.21
AF123462.1-201ENST00000554307 ERICH3Q5RHP9 1530 aa7.48□□□□□ -1.21
AF123462.1-201ENST00000554307 CEP170Q5SW79 1584 aa7.47□□□□□ -1.21
AF123462.1-201ENST00000554307 SHROOM2Q13796 1616 aa7.45□□□□□ -1.22
AF123462.1-201ENST00000554307 SPOCK2Q92563 424 aa7.45□□□□□ -1.22
AF123462.1-201ENST00000554307 FARP1Q9Y4F1 1045 aaPredicted RBP7.45□□□□□ -1.22
AF123462.1-201ENST00000554307 ERCC6L2Q5T890 1561 aa7.45□□□□□ -1.22
AF123462.1-201ENST00000554307 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
AF123462.1-201ENST00000554307 MNX1P50219 401 aaPredicted RBP7.42□□□□□ -1.22
AF123462.1-201ENST00000554307 EVX2Q03828 476 aa7.42□□□□□ -1.22
AF123462.1-201ENST00000554307 JPH4Q96JJ6 628 aa7.42□□□□□ -1.22
AF123462.1-201ENST00000554307 PRG4Q92954 1404 aaPredicted RBP7.41□□□□□ -1.22
AF123462.1-201ENST00000554307 RUSC2Q8N2Y8 1516 aa7.38□□□□□ -1.23
AF123462.1-201ENST00000554307 KIF27Q86VH2 1401 aa7.38□□□□□ -1.23
AF123462.1-201ENST00000554307 IGF1RP08069 1367 aa7.38□□□□□ -1.23
AF123462.1-201ENST00000554307 PKD2Q13563 968 aa7.38□□□□□ -1.23
AF123462.1-201ENST00000554307 KIAA0586Q9BVV6 1533 aa7.37□□□□□ -1.23
AF123462.1-201ENST00000554307 CUL7Q14999 1698 aa7.35□□□□□ -1.23
AF123462.1-201ENST00000554307 NUBP1P53384 320 aa7.35□□□□□ -1.23
AF123462.1-201ENST00000554307 RASEFQ8IZ41 740 aa7.35□□□□□ -1.23
AF123462.1-201ENST00000554307 FAM212AQ96EL1 285 aa7.35□□□□□ -1.23
AF123462.1-201ENST00000554307 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
AF123462.1-201ENST00000554307 PAK3O75914 559 aaPredicted RBP7.34□□□□□ -1.23
AF123462.1-201ENST00000554307 CIZ1Q9ULV3 898 aaPredicted RBP7.34□□□□□ -1.23
AF123462.1-201ENST00000554307 ABCC10Q5T3U5 1492 aa7.33□□□□□ -1.24
AF123462.1-201ENST00000554307 KIF13AQ9H1H9 1805 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms