RNA–Protein interactions for RNA: ENST00000553804.5

ITGA7-206, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGA7, Length 3,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-206ENST00000553804 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
ITGA7-206ENST00000553804 MSH5O43196 834 aa14.47□□□□□ -0.09
ITGA7-206ENST00000553804 B4GALNT3Q6L9W6 998 aa14.47□□□□□ -0.09
ITGA7-206ENST00000553804 FAM9BQ8IZU0 186 aa14.47□□□□□ -0.09
ITGA7-206ENST00000553804 ANP32AP39687 249 aaKnown RBP14.46□□□□□ -0.1
ITGA7-206ENST00000553804 SIN3AQ96ST3 1273 aa14.46□□□□□ -0.1
ITGA7-206ENST00000553804 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
ITGA7-206ENST00000553804 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
ITGA7-206ENST00000553804 EEA1Q15075 1411 aa14.44□□□□□ -0.1
ITGA7-206ENST00000553804 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
ITGA7-206ENST00000553804 NESP48681 1621 aa14.41□□□□□ -0.1
ITGA7-206ENST00000553804 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
ITGA7-206ENST00000553804 CLIP1P30622 1438 aa14.4□□□□□ -0.1
ITGA7-206ENST00000553804 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
ITGA7-206ENST00000553804 NOP58Q9Y2X3 529 aaKnown RBP14.38□□□□□ -0.11
ITGA7-206ENST00000553804 DAXXQ9UER7 740 aaPredicted RBP14.38□□□□□ -0.11
ITGA7-206ENST00000553804 P3H3Q8IVL6 736 aa14.37□□□□□ -0.11
ITGA7-206ENST00000553804 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
ITGA7-206ENST00000553804 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
ITGA7-206ENST00000553804 SALL2Q9Y467 1007 aaPredicted RBP14.35□□□□□ -0.11
ITGA7-206ENST00000553804 CFTRP13569 1480 aa14.34□□□□□ -0.11
ITGA7-206ENST00000553804 RAPGEF2Q9Y4G8 1499 aa14.32□□□□□ -0.12
ITGA7-206ENST00000553804 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
ITGA7-206ENST00000553804 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
ITGA7-206ENST00000553804 DHX57Q6P158 1386 aaKnown RBP14.29□□□□□ -0.12
ITGA7-206ENST00000553804 FBLN2P98095 1184 aa14.29□□□□□ -0.12
ITGA7-206ENST00000553804 PPP4R2Q9NY27 417 aa14.28□□□□□ -0.12
ITGA7-206ENST00000553804 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
ITGA7-206ENST00000553804 IL27Q8NEV9 243 aa14.26□□□□□ -0.13
ITGA7-206ENST00000553804 MRS2Q9HD23 443 aa14.26□□□□□ -0.13
ITGA7-206ENST00000553804 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
ITGA7-206ENST00000553804 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
ITGA7-206ENST00000553804 NEFMP07197 916 aa14.24□□□□□ -0.13
ITGA7-206ENST00000553804 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
ITGA7-206ENST00000553804 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
ITGA7-206ENST00000553804 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
ITGA7-206ENST00000553804 CUX2O14529 1486 aa14.22□□□□□ -0.13
ITGA7-206ENST00000553804 ARXQ96QS3 562 aa14.22□□□□□ -0.13
ITGA7-206ENST00000553804 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
ITGA7-206ENST00000553804 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
ITGA7-206ENST00000553804 CUX1P39880 1505 aa14.19□□□□□ -0.14
ITGA7-206ENST00000553804 CCER2I3L3R5 266 aa14.16□□□□□ -0.14
ITGA7-206ENST00000553804 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
ITGA7-206ENST00000553804 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
ITGA7-206ENST00000553804 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
ITGA7-206ENST00000553804 RAD54L2Q9Y4B4 1467 aa14.14□□□□□ -0.15
ITGA7-206ENST00000553804 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
ITGA7-206ENST00000553804 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
ITGA7-206ENST00000553804 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
ITGA7-206ENST00000553804 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
ITGA7-206ENST00000553804 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
ITGA7-206ENST00000553804 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
ITGA7-206ENST00000553804 KIF21BO75037 1637 aa14.08□□□□□ -0.16
ITGA7-206ENST00000553804 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
ITGA7-206ENST00000553804 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
ITGA7-206ENST00000553804 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
ITGA7-206ENST00000553804 IGF1RP08069 1367 aa14.06□□□□□ -0.16
ITGA7-206ENST00000553804 CHIC2Q9UKJ5 165 aa14.05□□□□□ -0.16
ITGA7-206ENST00000553804 TIMELESSQ9UNS1 1208 aa14.05□□□□□ -0.16
ITGA7-206ENST00000553804 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
ITGA7-206ENST00000553804 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
ITGA7-206ENST00000553804 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
ITGA7-206ENST00000553804 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
ITGA7-206ENST00000553804 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
ITGA7-206ENST00000553804 SLC4A3P48751 1232 aa14□□□□□ -0.17
ITGA7-206ENST00000553804 BIVM-ERCC5R4GMW8 1640 aa14□□□□□ -0.17
ITGA7-206ENST00000553804 EIF4G2P78344 907 aaKnown RBP eCLIP13.99□□□□□ -0.17
ITGA7-206ENST00000553804 KIF21AQ7Z4S6 1674 aa13.99□□□□□ -0.17
ITGA7-206ENST00000553804 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
ITGA7-206ENST00000553804 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
ITGA7-206ENST00000553804 CCDC184Q52MB2 194 aa13.97□□□□□ -0.17
ITGA7-206ENST00000553804 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
ITGA7-206ENST00000553804 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
ITGA7-206ENST00000553804 PRDM2Q13029 1718 aa13.96□□□□□ -0.18
ITGA7-206ENST00000553804 RRP7BPQ9NSQ0 103 aa13.96□□□□□ -0.18
ITGA7-206ENST00000553804 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.18
ITGA7-206ENST00000553804 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
ITGA7-206ENST00000553804 ARID4BQ4LE39 1312 aaPredicted RBP13.93□□□□□ -0.18
ITGA7-206ENST00000553804 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
ITGA7-206ENST00000553804 SETD5Q9C0A6 1442 aa13.92□□□□□ -0.18
ITGA7-206ENST00000553804 ERICH3Q5RHP9 1530 aa13.92□□□□□ -0.18
ITGA7-206ENST00000553804 UBE2Q2Q8WVN8 375 aa13.92□□□□□ -0.18
ITGA7-206ENST00000553804 FHOD3Q2V2M9 1422 aa13.92□□□□□ -0.18
ITGA7-206ENST00000553804 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
ITGA7-206ENST00000553804 ARHGAP35Q9NRY4 1499 aa13.91□□□□□ -0.18
ITGA7-206ENST00000553804 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
ITGA7-206ENST00000553804 FOXD1Q16676 465 aa13.88□□□□□ -0.19
ITGA7-206ENST00000553804 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
ITGA7-206ENST00000553804 MTUS2Q5JR59 1369 aa13.85□□□□□ -0.19
ITGA7-206ENST00000553804 RGS3P49796 1198 aa13.85□□□□□ -0.19
ITGA7-206ENST00000553804 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
ITGA7-206ENST00000553804 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
ITGA7-206ENST00000553804 PDE4AP27815 886 aa13.84□□□□□ -0.19
ITGA7-206ENST00000553804 GSE1Q14687 1217 aa13.84□□□□□ -0.19
ITGA7-206ENST00000553804 ZNF608Q9ULD9 1512 aaPredicted RBP13.83□□□□□ -0.19
ITGA7-206ENST00000553804 VSIG10Q8N0Z9 540 aa13.83□□□□□ -0.2
ITGA7-206ENST00000553804 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
ITGA7-206ENST00000553804 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
ITGA7-206ENST00000553804 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
ITGA7-206ENST00000553804 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms