RNA–Protein interactions for RNA: ENST00000553144.1

ATP2A2-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 1 (best)

Gene ATP2A2, Length 264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-212ENST00000553144 TOP2AP11388 1531 aaKnown RBP7.32□□□□□ -1.24
ATP2A2-212ENST00000553144 TOPBP1Q92547 1522 aa7.32□□□□□ -1.24
ATP2A2-212ENST00000553144 CCDC88BA6NC98 1476 aa7.3□□□□□ -1.24
ATP2A2-212ENST00000553144 SUPT5HO00267 1087 aaKnown RBP7.29□□□□□ -1.24
ATP2A2-212ENST00000553144 PLEKHG5O94827 1062 aa7.29□□□□□ -1.24
ATP2A2-212ENST00000553144 HRCP23327 699 aa7.28□□□□□ -1.24
ATP2A2-212ENST00000553144 EIF4G3O43432 1585 aaKnown RBP7.28□□□□□ -1.24
ATP2A2-212ENST00000553144 TDRD9Q8NDG6 1382 aaKnown RBP7.27□□□□□ -1.25
ATP2A2-212ENST00000553144 RAD54L2Q9Y4B4 1467 aa7.26□□□□□ -1.25
ATP2A2-212ENST00000553144 NPM3O75607 178 aaKnown RBP7.26□□□□□ -1.25
ATP2A2-212ENST00000553144 CHD1O14646 1710 aa7.25□□□□□ -1.25
ATP2A2-212ENST00000553144 UBTFP17480 764 aaKnown RBP7.25□□□□□ -1.25
ATP2A2-212ENST00000553144 TARBP1Q13395 1621 aaKnown RBP7.25□□□□□ -1.25
ATP2A2-212ENST00000553144 POLA1P09884 1462 aaPredicted RBP7.24□□□□□ -1.25
ATP2A2-212ENST00000553144 LOC105371045A0A1W2PR82 267 aa7.23□□□□□ -1.25
ATP2A2-212ENST00000553144 DNMBPQ6XZF7 1577 aa7.23□□□□□ -1.25
ATP2A2-212ENST00000553144 ABCC8Q09428 1581 aa7.22□□□□□ -1.25
ATP2A2-212ENST00000553144 SOGA1O94964 1423 aa7.21□□□□□ -1.25
ATP2A2-212ENST00000553144 CHMP7Q8WUX9 453 aaPredicted RBP7.21□□□□□ -1.26
ATP2A2-212ENST00000553144 CLASP1Q7Z460 1538 aa7.21□□□□□ -1.26
ATP2A2-212ENST00000553144 SNAPC4Q5SXM2 1469 aa7.2□□□□□ -1.26
ATP2A2-212ENST00000553144 PRDM2Q13029 1718 aa7.2□□□□□ -1.26
ATP2A2-212ENST00000553144 GAPVD1Q14C86 1478 aa7.16□□□□□ -1.26
ATP2A2-212ENST00000553144 FGD5Q6ZNL6 1462 aa7.16□□□□□ -1.26
ATP2A2-212ENST00000553144 ERCC6L2Q5T890 1561 aa7.15□□□□□ -1.27
ATP2A2-212ENST00000553144 FOXD4L1Q9NU39 408 aa7.14□□□□□ -1.27
ATP2A2-212ENST00000553144 CUX1P39880 1505 aa7.13□□□□□ -1.27
ATP2A2-212ENST00000553144 SYNJ2O15056 1496 aa7.13□□□□□ -1.27
ATP2A2-212ENST00000553144 GRIN2BQ13224 1484 aa7.13□□□□□ -1.27
ATP2A2-212ENST00000553144 MAGI1Q96QZ7 1491 aaPredicted RBP7.13□□□□□ -1.27
ATP2A2-212ENST00000553144 SYNJ1O43426 1573 aa7.12□□□□□ -1.27
ATP2A2-212ENST00000553144 NBR1Q14596 966 aa7.12□□□□□ -1.27
ATP2A2-212ENST00000553144 PPP4R3CPQ6ZMV5 832 aa7.1□□□□□ -1.27
ATP2A2-212ENST00000553144 CDK11BP21127 795 aaKnown RBP7.09□□□□□ -1.27
ATP2A2-212ENST00000553144 CDK11AQ9UQ88 783 aaPredicted RBP7.09□□□□□ -1.27
ATP2A2-212ENST00000553144 KDM4FA0A1W2PPD8 638 aa7.08□□□□□ -1.28
ATP2A2-212ENST00000553144 PDIA4P13667 645 aaKnown RBP7.08□□□□□ -1.28
ATP2A2-212ENST00000553144 CNKSR2Q8WXI2 1034 aa7.08□□□□□ -1.28
ATP2A2-212ENST00000553144 ILDR1Q86SU0 546 aaPredicted RBP7.07□□□□□ -1.28
ATP2A2-212ENST00000553144 WDR97A6NE52 1622 aa7.06□□□□□ -1.28
ATP2A2-212ENST00000553144 HMGB1P09429 215 aaKnown RBP7.06□□□□□ -1.28
ATP2A2-212ENST00000553144 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
ATP2A2-212ENST00000553144 CCDC9Q9Y3X0 531 aaKnown RBP7.06□□□□□ -1.28
ATP2A2-212ENST00000553144 CEP170Q5SW79 1584 aa7.05□□□□□ -1.28
ATP2A2-212ENST00000553144 NUP160Q12769 1436 aa7.05□□□□□ -1.28
ATP2A2-212ENST00000553144 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.05□□□□□ -1.28
ATP2A2-212ENST00000553144 ABCA10Q8WWZ4 1543 aa7.05□□□□□ -1.28
ATP2A2-212ENST00000553144 GRIN2AQ12879 1464 aa7.04□□□□□ -1.28
ATP2A2-212ENST00000553144 FAM69CQ0P6D2 419 aa7.04□□□□□ -1.28
ATP2A2-212ENST00000553144 PAXIP1Q6ZW49 1069 aaPredicted RBP7.04□□□□□ -1.28
ATP2A2-212ENST00000553144 ABCA5Q8WWZ7 1642 aa7.03□□□□□ -1.28
ATP2A2-212ENST00000553144 SAMD1Q6SPF0 538 aaPredicted RBP7.03□□□□□ -1.28
ATP2A2-212ENST00000553144 BBXQ8WY36 941 aaPredicted RBP7.03□□□□□ -1.28
ATP2A2-212ENST00000553144 PPP6R1Q9UPN7 881 aa7.03□□□□□ -1.28
ATP2A2-212ENST00000553144 PBRM1Q86U86 1689 aa7.03□□□□□ -1.28
ATP2A2-212ENST00000553144 HSP90B1P14625 803 aaKnown RBP7.02□□□□□ -1.29
ATP2A2-212ENST00000553144 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
ATP2A2-212ENST00000553144 JPH4Q96JJ6 628 aa7.02□□□□□ -1.29
ATP2A2-212ENST00000553144 PRG4Q92954 1404 aaPredicted RBP7.01□□□□□ -1.29
ATP2A2-212ENST00000553144 IGSF3O75054 1194 aa7.01□□□□□ -1.29
ATP2A2-212ENST00000553144 KIF13AQ9H1H9 1805 aa7.01□□□□□ -1.29
ATP2A2-212ENST00000553144 CFAP44Q96MT7 982 aa7□□□□□ -1.29
ATP2A2-212ENST00000553144 BCL11AQ9H165 835 aa7□□□□□ -1.29
ATP2A2-212ENST00000553144 SHROOM2Q13796 1616 aa7□□□□□ -1.29
ATP2A2-212ENST00000553144 ABCC10Q5T3U5 1492 aa6.99□□□□□ -1.29
ATP2A2-212ENST00000553144 TSHZ2Q9NRE2 1034 aa6.99□□□□□ -1.29
ATP2A2-212ENST00000553144 FHAD1B1AJZ9 1412 aa6.99□□□□□ -1.29
ATP2A2-212ENST00000553144 ADAMTS12P58397 1594 aa6.99□□□□□ -1.29
ATP2A2-212ENST00000553144 WRNQ14191 1432 aaPredicted RBP eCLIP6.98□□□□□ -1.29
ATP2A2-212ENST00000553144 NPM1P06748 294 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATP2A2-212ENST00000553144 BRD2P25440 801 aaKnown RBP6.95□□□□□ -1.3
ATP2A2-212ENST00000553144 SENP3Q9H4L4 574 aaPredicted RBP6.95□□□□□ -1.3
ATP2A2-212ENST00000553144 ZBTB7CA1YPR0 619 aa6.94□□□□□ -1.3
ATP2A2-212ENST00000553144 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
ATP2A2-212ENST00000553144 DIP2BQ9P265 1576 aa6.94□□□□□ -1.3
ATP2A2-212ENST00000553144 MAPKBP1O60336 1514 aa6.93□□□□□ -1.3
ATP2A2-212ENST00000553144 ADCY10Q96PN6 1610 aa6.93□□□□□ -1.3
ATP2A2-212ENST00000553144 ERICH3Q5RHP9 1530 aa6.92□□□□□ -1.3
ATP2A2-212ENST00000553144 COL17A1Q9UMD9 1497 aaPredicted RBP6.92□□□□□ -1.3
ATP2A2-212ENST00000553144 KDM6BO15054 1643 aa6.91□□□□□ -1.3
ATP2A2-212ENST00000553144 TOP2BQ02880 1626 aa6.91□□□□□ -1.3
ATP2A2-212ENST00000553144 PKD2Q13563 968 aa6.91□□□□□ -1.3
ATP2A2-212ENST00000553144 IGF1RP08069 1367 aa6.89□□□□□ -1.31
ATP2A2-212ENST00000553144 RUSC2Q8N2Y8 1516 aa6.89□□□□□ -1.31
ATP2A2-212ENST00000553144 BIVM-ERCC5R4GMW8 1640 aa6.89□□□□□ -1.31
ATP2A2-212ENST00000553144 TSPOAP1O95153 1857 aa6.88□□□□□ -1.31
ATP2A2-212ENST00000553144 ADGRL1O94910 1474 aa6.88□□□□□ -1.31
ATP2A2-212ENST00000553144 PDE4CQ08493 712 aa6.88□□□□□ -1.31
ATP2A2-212ENST00000553144 DHX37Q8IY37 1157 aaKnown RBP6.88□□□□□ -1.31
ATP2A2-212ENST00000553144 KIAA0586Q9BVV6 1533 aa6.87□□□□□ -1.31
ATP2A2-212ENST00000553144 PTPRGP23470 1445 aa6.87□□□□□ -1.31
ATP2A2-212ENST00000553144 TAF7LQ5H9L4 462 aa6.87□□□□□ -1.31
ATP2A2-212ENST00000553144 SPRYD3Q8NCJ5 442 aa6.87□□□□□ -1.31
ATP2A2-212ENST00000553144 ASXL2Q76L83 1435 aa6.85□□□□□ -1.31
ATP2A2-212ENST00000553144 PPRC1Q5VV67 1664 aaKnown RBP6.85□□□□□ -1.31
ATP2A2-212ENST00000553144 BRPF1P55201 1214 aaPredicted RBP6.85□□□□□ -1.31
ATP2A2-212ENST00000553144 NECTIN2Q92692 538 aa6.85□□□□□ -1.31
ATP2A2-212ENST00000553144 HECW2Q9P2P5 1572 aa6.84□□□□□ -1.31
ATP2A2-212ENST00000553144 ABCC2Q92887 1545 aa6.84□□□□□ -1.31
ATP2A2-212ENST00000553144 ARID3AQ99856 593 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms