RNA–Protein interactions for RNA: ENST00000552942.5

CCDC65-205, Transcript of coiled-coil domain containing 65, humanhuman

TSL 5

Gene CCDC65, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-205ENST00000552942 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
CCDC65-205ENST00000552942 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
CCDC65-205ENST00000552942 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
CCDC65-205ENST00000552942 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
CCDC65-205ENST00000552942 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
CCDC65-205ENST00000552942 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
CCDC65-205ENST00000552942 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
CCDC65-205ENST00000552942 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
CCDC65-205ENST00000552942 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
CCDC65-205ENST00000552942 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
CCDC65-205ENST00000552942 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
CCDC65-205ENST00000552942 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
CCDC65-205ENST00000552942 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC65-205ENST00000552942 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
CCDC65-205ENST00000552942 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
CCDC65-205ENST00000552942 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
CCDC65-205ENST00000552942 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
CCDC65-205ENST00000552942 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
CCDC65-205ENST00000552942 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
CCDC65-205ENST00000552942 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
CCDC65-205ENST00000552942 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
CCDC65-205ENST00000552942 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
CCDC65-205ENST00000552942 CUX1P39880 1505 aa12.79□□□□□ -0.36
CCDC65-205ENST00000552942 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CCDC65-205ENST00000552942 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
CCDC65-205ENST00000552942 ABCC8Q09428 1581 aa12.77□□□□□ -0.37
CCDC65-205ENST00000552942 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
CCDC65-205ENST00000552942 HAX1O00165 279 aa12.74□□□□□ -0.37
CCDC65-205ENST00000552942 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
CCDC65-205ENST00000552942 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
CCDC65-205ENST00000552942 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC65-205ENST00000552942 CHD1O14646 1710 aa12.71□□□□□ -0.37
CCDC65-205ENST00000552942 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
CCDC65-205ENST00000552942 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
CCDC65-205ENST00000552942 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
CCDC65-205ENST00000552942 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
CCDC65-205ENST00000552942 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
CCDC65-205ENST00000552942 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
CCDC65-205ENST00000552942 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
CCDC65-205ENST00000552942 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
CCDC65-205ENST00000552942 SOGA1O94964 1423 aa12.63□□□□□ -0.39
CCDC65-205ENST00000552942 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
CCDC65-205ENST00000552942 ARHGEF11O15085 1522 aa12.61□□□□□ -0.39
CCDC65-205ENST00000552942 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
CCDC65-205ENST00000552942 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
CCDC65-205ENST00000552942 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
CCDC65-205ENST00000552942 SUPT5HO00267 1087 aaKnown RBP12.61□□□□□ -0.39
CCDC65-205ENST00000552942 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
CCDC65-205ENST00000552942 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
CCDC65-205ENST00000552942 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
CCDC65-205ENST00000552942 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
CCDC65-205ENST00000552942 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
CCDC65-205ENST00000552942 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
CCDC65-205ENST00000552942 ADAMTS12P58397 1594 aa12.52□□□□□ -0.41
CCDC65-205ENST00000552942 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
CCDC65-205ENST00000552942 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
CCDC65-205ENST00000552942 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
CCDC65-205ENST00000552942 WRNQ14191 1432 aaPredicted RBP eCLIP12.5□□□□□ -0.41
CCDC65-205ENST00000552942 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
CCDC65-205ENST00000552942 PROM2Q8N271 834 aa12.49□□□□□ -0.41
CCDC65-205ENST00000552942 CEP170Q5SW79 1584 aa12.46□□□□□ -0.41
CCDC65-205ENST00000552942 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
CCDC65-205ENST00000552942 ERCC6L2Q5T890 1561 aa12.46□□□□□ -0.42
CCDC65-205ENST00000552942 EVX2Q03828 476 aa12.45□□□□□ -0.42
CCDC65-205ENST00000552942 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
CCDC65-205ENST00000552942 FKBP8Q14318 412 aa12.43□□□□□ -0.42
CCDC65-205ENST00000552942 NUP160Q12769 1436 aa12.42□□□□□ -0.42
CCDC65-205ENST00000552942 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
CCDC65-205ENST00000552942 ERICH3Q5RHP9 1530 aa12.41□□□□□ -0.42
CCDC65-205ENST00000552942 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
CCDC65-205ENST00000552942 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
CCDC65-205ENST00000552942 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC65-205ENST00000552942 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
CCDC65-205ENST00000552942 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
CCDC65-205ENST00000552942 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
CCDC65-205ENST00000552942 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
CCDC65-205ENST00000552942 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
CCDC65-205ENST00000552942 MIER1Q8N108 512 aa12.29□□□□□ -0.44
CCDC65-205ENST00000552942 GABBR2O75899 941 aa12.27□□□□□ -0.45
CCDC65-205ENST00000552942 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
CCDC65-205ENST00000552942 CUL7Q14999 1698 aa12.26□□□□□ -0.45
CCDC65-205ENST00000552942 IGF1RP08069 1367 aa12.26□□□□□ -0.45
CCDC65-205ENST00000552942 CLCN6P51797 869 aa12.26□□□□□ -0.45
CCDC65-205ENST00000552942 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
CCDC65-205ENST00000552942 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
CCDC65-205ENST00000552942 KIF27Q86VH2 1401 aa12.21□□□□□ -0.46
CCDC65-205ENST00000552942 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
CCDC65-205ENST00000552942 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
CCDC65-205ENST00000552942 PRG4Q92954 1404 aaPredicted RBP12.18□□□□□ -0.46
CCDC65-205ENST00000552942 ADCY10Q96PN6 1610 aa12.18□□□□□ -0.46
CCDC65-205ENST00000552942 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
CCDC65-205ENST00000552942 KIAA0586Q9BVV6 1533 aa12.17□□□□□ -0.46
CCDC65-205ENST00000552942 KIF13AQ9H1H9 1805 aa12.16□□□□□ -0.46
CCDC65-205ENST00000552942 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
CCDC65-205ENST00000552942 CARMIL1Q5VZK9 1371 aa12.11□□□□□ -0.47
CCDC65-205ENST00000552942 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
CCDC65-205ENST00000552942 IQGAP2Q13576 1575 aa12.1□□□□□ -0.47
CCDC65-205ENST00000552942 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
CCDC65-205ENST00000552942 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
CCDC65-205ENST00000552942 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms