RNA–Protein interactions for RNA: ENST00000552942.5

CCDC65-205, Transcript of coiled-coil domain containing 65, humanhuman

TSL 5

Gene CCDC65, Length 1,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-205ENST00000552942 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
CCDC65-205ENST00000552942 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
CCDC65-205ENST00000552942 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
CCDC65-205ENST00000552942 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
CCDC65-205ENST00000552942 FOXD1Q16676 465 aa19.02■□□□□ 0.64
CCDC65-205ENST00000552942 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
CCDC65-205ENST00000552942 ADRA2BP18089 450 aa17.92■□□□□ 0.46
CCDC65-205ENST00000552942 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
CCDC65-205ENST00000552942 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
CCDC65-205ENST00000552942 MSH5O43196 834 aa17.82■□□□□ 0.44
CCDC65-205ENST00000552942 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
CCDC65-205ENST00000552942 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
CCDC65-205ENST00000552942 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
CCDC65-205ENST00000552942 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
CCDC65-205ENST00000552942 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
CCDC65-205ENST00000552942 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
CCDC65-205ENST00000552942 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
CCDC65-205ENST00000552942 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
CCDC65-205ENST00000552942 CCDC180Q9P1Z9 1646 aa15.8■□□□□ 0.12
CCDC65-205ENST00000552942 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
CCDC65-205ENST00000552942 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
CCDC65-205ENST00000552942 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
CCDC65-205ENST00000552942 ABCC9O60706 1549 aa15.58■□□□□ 0.09
CCDC65-205ENST00000552942 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
CCDC65-205ENST00000552942 KCNA4P22459 653 aa15.34■□□□□ 0.05
CCDC65-205ENST00000552942 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
CCDC65-205ENST00000552942 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
CCDC65-205ENST00000552942 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
CCDC65-205ENST00000552942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC65-205ENST00000552942 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
CCDC65-205ENST00000552942 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
CCDC65-205ENST00000552942 NACADO15069 1562 aa14.83□□□□□ -0.04
CCDC65-205ENST00000552942 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
CCDC65-205ENST00000552942 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
CCDC65-205ENST00000552942 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
CCDC65-205ENST00000552942 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
CCDC65-205ENST00000552942 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
CCDC65-205ENST00000552942 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
CCDC65-205ENST00000552942 DCAF1Q9Y4B6 1507 aa14.59□□□□□ -0.07
CCDC65-205ENST00000552942 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
CCDC65-205ENST00000552942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
CCDC65-205ENST00000552942 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
CCDC65-205ENST00000552942 APLP2Q06481 763 aa14.5□□□□□ -0.09
CCDC65-205ENST00000552942 CAPN15O75808 1086 aa14.48□□□□□ -0.09
CCDC65-205ENST00000552942 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
CCDC65-205ENST00000552942 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
CCDC65-205ENST00000552942 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
CCDC65-205ENST00000552942 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
CCDC65-205ENST00000552942 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
CCDC65-205ENST00000552942 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
CCDC65-205ENST00000552942 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
CCDC65-205ENST00000552942 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
CCDC65-205ENST00000552942 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
CCDC65-205ENST00000552942 TRHP20396 242 aaPredicted RBP14.29□□□□□ -0.12
CCDC65-205ENST00000552942 DSG3P32926 999 aa14.27□□□□□ -0.12
CCDC65-205ENST00000552942 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
CCDC65-205ENST00000552942 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
CCDC65-205ENST00000552942 ABCB7O75027 752 aa14.12□□□□□ -0.15
CCDC65-205ENST00000552942 ZBTB22O15209 634 aa14.04□□□□□ -0.16
CCDC65-205ENST00000552942 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
CCDC65-205ENST00000552942 POLA2Q14181 598 aa13.93□□□□□ -0.18
CCDC65-205ENST00000552942 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
CCDC65-205ENST00000552942 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
CCDC65-205ENST00000552942 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
CCDC65-205ENST00000552942 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
CCDC65-205ENST00000552942 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
CCDC65-205ENST00000552942 NCAPD3P42695 1498 aa13.71□□□□□ -0.22
CCDC65-205ENST00000552942 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
CCDC65-205ENST00000552942 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
CCDC65-205ENST00000552942 HMGXB3Q12766 1538 aa13.66□□□□□ -0.22
CCDC65-205ENST00000552942 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
CCDC65-205ENST00000552942 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
CCDC65-205ENST00000552942 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
CCDC65-205ENST00000552942 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
CCDC65-205ENST00000552942 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
CCDC65-205ENST00000552942 FBLN2P98095 1184 aa13.5□□□□□ -0.25
CCDC65-205ENST00000552942 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
CCDC65-205ENST00000552942 NESP48681 1621 aa13.5□□□□□ -0.25
CCDC65-205ENST00000552942 WIZO95785 1651 aa13.46□□□□□ -0.25
CCDC65-205ENST00000552942 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
CCDC65-205ENST00000552942 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
CCDC65-205ENST00000552942 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
CCDC65-205ENST00000552942 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
CCDC65-205ENST00000552942 CUX2O14529 1486 aa13.36□□□□□ -0.27
CCDC65-205ENST00000552942 POTEHQ6S545 545 aa13.36□□□□□ -0.27
CCDC65-205ENST00000552942 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
CCDC65-205ENST00000552942 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
CCDC65-205ENST00000552942 ERCC6Q03468 1493 aa13.33□□□□□ -0.28
CCDC65-205ENST00000552942 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
CCDC65-205ENST00000552942 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
CCDC65-205ENST00000552942 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
CCDC65-205ENST00000552942 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.28
CCDC65-205ENST00000552942 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
CCDC65-205ENST00000552942 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
CCDC65-205ENST00000552942 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
CCDC65-205ENST00000552942 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
CCDC65-205ENST00000552942 WDR62O43379 1518 aa13.2□□□□□ -0.3
CCDC65-205ENST00000552942 CFTRP13569 1480 aa13.18□□□□□ -0.3
CCDC65-205ENST00000552942 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
CCDC65-205ENST00000552942 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms