RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 IGF1RP08069 1367 aa18.13■□□□□ 0.49
CACNB3-224ENST00000552812 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
CACNB3-224ENST00000552812 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
CACNB3-224ENST00000552812 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
CACNB3-224ENST00000552812 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
CACNB3-224ENST00000552812 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
CACNB3-224ENST00000552812 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
CACNB3-224ENST00000552812 CUL7Q14999 1698 aa18.05■□□□□ 0.48
CACNB3-224ENST00000552812 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
CACNB3-224ENST00000552812 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
CACNB3-224ENST00000552812 CEP162Q5TB80 1403 aa18.01■□□□□ 0.47
CACNB3-224ENST00000552812 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
CACNB3-224ENST00000552812 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
CACNB3-224ENST00000552812 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
CACNB3-224ENST00000552812 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
CACNB3-224ENST00000552812 DSG3P32926 999 aa17.95■□□□□ 0.46
CACNB3-224ENST00000552812 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-224ENST00000552812 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
CACNB3-224ENST00000552812 CLIP1P30622 1438 aa17.9■□□□□ 0.46
CACNB3-224ENST00000552812 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
CACNB3-224ENST00000552812 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
CACNB3-224ENST00000552812 CAPN15O75808 1086 aa17.88■□□□□ 0.45
CACNB3-224ENST00000552812 SPINK5Q9NQ38 1064 aaPredicted RBP17.86■□□□□ 0.45
CACNB3-224ENST00000552812 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.44
CACNB3-224ENST00000552812 CTTNBP2Q8WZ74 1663 aa17.82■□□□□ 0.44
CACNB3-224ENST00000552812 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
CACNB3-224ENST00000552812 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
CACNB3-224ENST00000552812 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
CACNB3-224ENST00000552812 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
CACNB3-224ENST00000552812 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
CACNB3-224ENST00000552812 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
CACNB3-224ENST00000552812 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
CACNB3-224ENST00000552812 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-224ENST00000552812 IQGAP2Q13576 1575 aa17.67■□□□□ 0.42
CACNB3-224ENST00000552812 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-224ENST00000552812 KIAA0586Q9BVV6 1533 aa17.64■□□□□ 0.41
CACNB3-224ENST00000552812 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
CACNB3-224ENST00000552812 NUP160Q12769 1436 aa17.61■□□□□ 0.41
CACNB3-224ENST00000552812 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
CACNB3-224ENST00000552812 UGGT2Q9NYU1 1516 aa17.59■□□□□ 0.41
CACNB3-224ENST00000552812 FBLN2P98095 1184 aa17.57■□□□□ 0.4
CACNB3-224ENST00000552812 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
CACNB3-224ENST00000552812 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-224ENST00000552812 APLP2Q06481 763 aa17.55■□□□□ 0.4
CACNB3-224ENST00000552812 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
CACNB3-224ENST00000552812 CHD1O14646 1710 aa17.54■□□□□ 0.4
CACNB3-224ENST00000552812 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
CACNB3-224ENST00000552812 MAP3K1Q13233 1512 aa17.5■□□□□ 0.39
CACNB3-224ENST00000552812 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
CACNB3-224ENST00000552812 PCF11O94913 1555 aaKnown RBP17.49■□□□□ 0.39
CACNB3-224ENST00000552812 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
CACNB3-224ENST00000552812 KIAA0556O60303 1618 aa17.49■□□□□ 0.39
CACNB3-224ENST00000552812 DISP1Q96F81 1524 aa17.48■□□□□ 0.39
CACNB3-224ENST00000552812 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
CACNB3-224ENST00000552812 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
CACNB3-224ENST00000552812 KCNA4P22459 653 aa17.45■□□□□ 0.38
CACNB3-224ENST00000552812 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
CACNB3-224ENST00000552812 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
CACNB3-224ENST00000552812 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
CACNB3-224ENST00000552812 TIAM1Q13009 1591 aa17.44■□□□□ 0.38
CACNB3-224ENST00000552812 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
CACNB3-224ENST00000552812 CFAP43Q8NDM7 1665 aa17.41■□□□□ 0.38
CACNB3-224ENST00000552812 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
CACNB3-224ENST00000552812 ABCB7O75027 752 aa17.39■□□□□ 0.37
CACNB3-224ENST00000552812 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
CACNB3-224ENST00000552812 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
CACNB3-224ENST00000552812 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
CACNB3-224ENST00000552812 KANK4Q5T7N3 995 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-224ENST00000552812 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-224ENST00000552812 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
CACNB3-224ENST00000552812 CCDC18Q5T9S5 1454 aa17.34■□□□□ 0.37
CACNB3-224ENST00000552812 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-224ENST00000552812 ATP1B4Q9UN42 357 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-224ENST00000552812 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
CACNB3-224ENST00000552812 RAPGEF6Q8TEU7 1601 aa17.31■□□□□ 0.36
CACNB3-224ENST00000552812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-224ENST00000552812 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
CACNB3-224ENST00000552812 EPRSP07814 1512 aaKnown RBP17.28■□□□□ 0.36
CACNB3-224ENST00000552812 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
CACNB3-224ENST00000552812 ABCA8O94911 1581 aa17.24■□□□□ 0.35
CACNB3-224ENST00000552812 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
CACNB3-224ENST00000552812 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
CACNB3-224ENST00000552812 PTPRGP23470 1445 aa17.23■□□□□ 0.35
CACNB3-224ENST00000552812 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
CACNB3-224ENST00000552812 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
CACNB3-224ENST00000552812 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
CACNB3-224ENST00000552812 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
CACNB3-224ENST00000552812 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
CACNB3-224ENST00000552812 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
CACNB3-224ENST00000552812 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
CACNB3-224ENST00000552812 MAGI3Q5TCQ9 1506 aa17.17■□□□□ 0.34
CACNB3-224ENST00000552812 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
CACNB3-224ENST00000552812 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
CACNB3-224ENST00000552812 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-224ENST00000552812 CDK11AQ9UQ88 783 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-224ENST00000552812 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
CACNB3-224ENST00000552812 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
CACNB3-224ENST00000552812 NCOA2Q15596 1464 aa17.14■□□□□ 0.33
CACNB3-224ENST00000552812 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
CACNB3-224ENST00000552812 ATP10BO94823 1461 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms