RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 KIF21BO75037 1637 aa8.35□□□□□ -1.07
CCNT1-204ENST00000551989 ZNF692Q9BU19 519 aaPredicted RBP8.34□□□□□ -1.07
CCNT1-204ENST00000551989 ABCC8Q09428 1581 aa8.33□□□□□ -1.08
CCNT1-204ENST00000551989 TNIKQ9UKE5 1360 aa8.33□□□□□ -1.08
CCNT1-204ENST00000551989 PRKAR2AP13861 404 aaKnown RBP8.31□□□□□ -1.08
CCNT1-204ENST00000551989 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
CCNT1-204ENST00000551989 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
CCNT1-204ENST00000551989 CLEC11AQ9Y240 323 aa8.29□□□□□ -1.08
CCNT1-204ENST00000551989 BAZ1BQ9UIG0 1483 aaKnown RBP8.29□□□□□ -1.08
CCNT1-204ENST00000551989 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
CCNT1-204ENST00000551989 PRDM2Q13029 1718 aa8.28□□□□□ -1.08
CCNT1-204ENST00000551989 CEP162Q5TB80 1403 aa8.28□□□□□ -1.08
CCNT1-204ENST00000551989 CEP164Q9UPV0 1460 aa8.27□□□□□ -1.09
CCNT1-204ENST00000551989 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
CCNT1-204ENST00000551989 BIVM-ERCC5R4GMW8 1640 aa8.27□□□□□ -1.09
CCNT1-204ENST00000551989 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
CCNT1-204ENST00000551989 HMGXB3Q12766 1538 aa8.24□□□□□ -1.09
CCNT1-204ENST00000551989 TOP2BQ02880 1626 aa8.24□□□□□ -1.09
CCNT1-204ENST00000551989 ATAD2BQ9ULI0 1458 aa8.24□□□□□ -1.09
CCNT1-204ENST00000551989 SYNJ1O43426 1573 aa8.23□□□□□ -1.09
CCNT1-204ENST00000551989 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCNT1-204ENST00000551989 ERICH3Q5RHP9 1530 aa8.22□□□□□ -1.09
CCNT1-204ENST00000551989 PELP1Q8IZL8 1130 aaKnown RBP8.2□□□□□ -1.1
CCNT1-204ENST00000551989 SOGA1O94964 1423 aa8.2□□□□□ -1.1
CCNT1-204ENST00000551989 CHADLQ6NUI6 762 aa8.18□□□□□ -1.1
CCNT1-204ENST00000551989 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
CCNT1-204ENST00000551989 GABBR2O75899 941 aa8.16□□□□□ -1.1
CCNT1-204ENST00000551989 VPS8Q8N3P4 1428 aa8.16□□□□□ -1.1
CCNT1-204ENST00000551989 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
CCNT1-204ENST00000551989 CLIP1P30622 1438 aa8.13□□□□□ -1.11
CCNT1-204ENST00000551989 CCER1Q8TC90 406 aaPredicted RBP8.13□□□□□ -1.11
CCNT1-204ENST00000551989 RUSC2Q8N2Y8 1516 aa8.13□□□□□ -1.11
CCNT1-204ENST00000551989 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
CCNT1-204ENST00000551989 FARP1Q9Y4F1 1045 aaPredicted RBP8.09□□□□□ -1.11
CCNT1-204ENST00000551989 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
CCNT1-204ENST00000551989 PRXQ9BXM0 1461 aa8.08□□□□□ -1.12
CCNT1-204ENST00000551989 RAPGEF2Q9Y4G8 1499 aa8.06□□□□□ -1.12
CCNT1-204ENST00000551989 CENPBP07199 599 aaPredicted RBP8.06□□□□□ -1.12
CCNT1-204ENST00000551989 CFTRP13569 1480 aa8.06□□□□□ -1.12
CCNT1-204ENST00000551989 MAP3K1Q13233 1512 aa8.05□□□□□ -1.12
CCNT1-204ENST00000551989 KIF27Q86VH2 1401 aa8.04□□□□□ -1.12
CCNT1-204ENST00000551989 EHMT2Q96KQ7 1210 aa8.04□□□□□ -1.12
CCNT1-204ENST00000551989 CUX1P39880 1505 aa8.03□□□□□ -1.12
CCNT1-204ENST00000551989 CD44P16070 742 aaKnown RBP8.03□□□□□ -1.12
CCNT1-204ENST00000551989 POTEIP0CG38 1075 aa8.02□□□□□ -1.13
CCNT1-204ENST00000551989 CLCN6P51797 869 aa8.02□□□□□ -1.13
CCNT1-204ENST00000551989 CUX2O14529 1486 aa8.01□□□□□ -1.13
CCNT1-204ENST00000551989 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
CCNT1-204ENST00000551989 ARAP1Q96P48 1450 aa8□□□□□ -1.13
CCNT1-204ENST00000551989 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
CCNT1-204ENST00000551989 LHX8Q68G74 356 aa8□□□□□ -1.13
CCNT1-204ENST00000551989 CREBZFQ9NS37 354 aa8□□□□□ -1.13
CCNT1-204ENST00000551989 ACIN1Q9UKV3 1341 aaKnown RBP8□□□□□ -1.13
CCNT1-204ENST00000551989 CFAP43Q8NDM7 1665 aa7.99□□□□□ -1.13
CCNT1-204ENST00000551989 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
CCNT1-204ENST00000551989 STAG3Q9UJ98 1225 aa7.99□□□□□ -1.13
CCNT1-204ENST00000551989 CC2D2AQ9P2K1 1620 aa7.98□□□□□ -1.13
CCNT1-204ENST00000551989 CUL7Q14999 1698 aa7.97□□□□□ -1.13
CCNT1-204ENST00000551989 SPDYE4A6NLX3 237 aa7.96□□□□□ -1.14
CCNT1-204ENST00000551989 CTTNBP2Q8WZ74 1663 aa7.95□□□□□ -1.14
CCNT1-204ENST00000551989 ZNF579Q8NAF0 562 aaKnown RBP7.95□□□□□ -1.14
CCNT1-204ENST00000551989 TIAM1Q13009 1591 aa7.95□□□□□ -1.14
CCNT1-204ENST00000551989 KIF21AQ7Z4S6 1674 aa7.95□□□□□ -1.14
CCNT1-204ENST00000551989 EFCAB5A4FU69 1503 aa7.94□□□□□ -1.14
CCNT1-204ENST00000551989 FHAD1B1AJZ9 1412 aa7.93□□□□□ -1.14
CCNT1-204ENST00000551989 ARHGAP35Q9NRY4 1499 aa7.93□□□□□ -1.14
CCNT1-204ENST00000551989 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
CCNT1-204ENST00000551989 CADPSQ9ULU8 1353 aa7.91□□□□□ -1.14
CCNT1-204ENST00000551989 WDR97A6NE52 1622 aa7.91□□□□□ -1.14
CCNT1-204ENST00000551989 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCNT1-204ENST00000551989 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
CCNT1-204ENST00000551989 CCNB3Q8WWL7 1395 aa7.89□□□□□ -1.15
CCNT1-204ENST00000551989 MNX1P50219 401 aaPredicted RBP7.89□□□□□ -1.15
CCNT1-204ENST00000551989 MYT1Q01538 1121 aa7.89□□□□□ -1.15
CCNT1-204ENST00000551989 ZRANB1Q9UGI0 708 aa7.89□□□□□ -1.15
CCNT1-204ENST00000551989 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
CCNT1-204ENST00000551989 FGD5Q6ZNL6 1462 aa7.88□□□□□ -1.15
CCNT1-204ENST00000551989 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
CCNT1-204ENST00000551989 FYCO1Q9BQS8 1478 aa7.87□□□□□ -1.15
CCNT1-204ENST00000551989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCNT1-204ENST00000551989 NEUROD1Q13562 356 aa7.87□□□□□ -1.15
CCNT1-204ENST00000551989 LAMC3Q9Y6N6 1575 aa7.87□□□□□ -1.15
CCNT1-204ENST00000551989 PROM2Q8N271 834 aa7.86□□□□□ -1.15
CCNT1-204ENST00000551989 PCF11O94913 1555 aaKnown RBP7.85□□□□□ -1.15
CCNT1-204ENST00000551989 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
CCNT1-204ENST00000551989 LRRC9Q6ZRR7 1453 aa7.85□□□□□ -1.15
CCNT1-204ENST00000551989 IGF1RP08069 1367 aa7.84□□□□□ -1.15
CCNT1-204ENST00000551989 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.15
CCNT1-204ENST00000551989 GALR2O43603 387 aaPredicted RBP7.84□□□□□ -1.15
CCNT1-204ENST00000551989 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.15
CCNT1-204ENST00000551989 FANCD2Q9BXW9 1451 aa7.83□□□□□ -1.16
CCNT1-204ENST00000551989 ABCA5Q8WWZ7 1642 aa7.82□□□□□ -1.16
CCNT1-204ENST00000551989 SAMD9Q5K651 1589 aa7.82□□□□□ -1.16
CCNT1-204ENST00000551989 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
CCNT1-204ENST00000551989 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
CCNT1-204ENST00000551989 CASKIN1Q8WXD9 1431 aa7.81□□□□□ -1.16
CCNT1-204ENST00000551989 TOPBP1Q92547 1522 aa7.81□□□□□ -1.16
CCNT1-204ENST00000551989 FMN1Q68DA7 1419 aa7.8□□□□□ -1.16
CCNT1-204ENST00000551989 SETD5Q9C0A6 1442 aa7.79□□□□□ -1.16
CCNT1-204ENST00000551989 MAPKBP1O60336 1514 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms