RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 AEBP2Q6ZN18 517 aaPredicted RBP15.85■□□□□ 0.13
CCNT1-204ENST00000551989 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
CCNT1-204ENST00000551989 SENP3Q9H4L4 574 aaPredicted RBP13.5□□□□□ -0.25
CCNT1-204ENST00000551989 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
CCNT1-204ENST00000551989 FOXD1Q16676 465 aa12.61□□□□□ -0.39
CCNT1-204ENST00000551989 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
CCNT1-204ENST00000551989 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
CCNT1-204ENST00000551989 MSH5O43196 834 aa11.82□□□□□ -0.52
CCNT1-204ENST00000551989 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
CCNT1-204ENST00000551989 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
CCNT1-204ENST00000551989 ADRA2BP18089 450 aa11.63□□□□□ -0.55
CCNT1-204ENST00000551989 NISCHQ9Y2I1 1504 aa11.19□□□□□ -0.62
CCNT1-204ENST00000551989 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
CCNT1-204ENST00000551989 DMRT2Q9Y5R5 561 aa10.71□□□□□ -0.69
CCNT1-204ENST00000551989 SCAF1Q9H7N4 1312 aaKnown RBP10.62□□□□□ -0.71
CCNT1-204ENST00000551989 PPP4R3CPQ6ZMV5 832 aa10.36□□□□□ -0.75
CCNT1-204ENST00000551989 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
CCNT1-204ENST00000551989 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.77
CCNT1-204ENST00000551989 CACNB1Q02641 598 aaPredicted RBP10.16□□□□□ -0.78
CCNT1-204ENST00000551989 RNF216Q9NWF9 866 aaPredicted RBP10.16□□□□□ -0.78
CCNT1-204ENST00000551989 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
CCNT1-204ENST00000551989 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
CCNT1-204ENST00000551989 DNAJC5BQ9UF47 199 aa10.02□□□□□ -0.81
CCNT1-204ENST00000551989 C1QBPQ07021 282 aaKnown RBP9.95□□□□□ -0.82
CCNT1-204ENST00000551989 NCBP3Q53F19 620 aaKnown RBP9.9□□□□□ -0.82
CCNT1-204ENST00000551989 NPM3O75607 178 aaKnown RBP9.8□□□□□ -0.84
CCNT1-204ENST00000551989 CCDC180Q9P1Z9 1646 aa9.75□□□□□ -0.85
CCNT1-204ENST00000551989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.7□□□□□ -0.864e-8■■■■□ 25.6
CCNT1-204ENST00000551989 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
CCNT1-204ENST00000551989 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
CCNT1-204ENST00000551989 KCNA4P22459 653 aa9.49□□□□□ -0.89
CCNT1-204ENST00000551989 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
CCNT1-204ENST00000551989 SLC4A2P04920 1241 aa9.42□□□□□ -0.9
CCNT1-204ENST00000551989 DSG3P32926 999 aa9.42□□□□□ -0.9
CCNT1-204ENST00000551989 DCAF1Q9Y4B6 1507 aa9.37□□□□□ -0.91
CCNT1-204ENST00000551989 CAPN15O75808 1086 aa9.35□□□□□ -0.91
CCNT1-204ENST00000551989 POTEHQ6S545 545 aa9.26□□□□□ -0.93
CCNT1-204ENST00000551989 APLP2Q06481 763 aa9.22□□□□□ -0.93
CCNT1-204ENST00000551989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
CCNT1-204ENST00000551989 HNRNPUL2Q1KMD3 747 aaKnown RBP9.21□□□□□ -0.94
CCNT1-204ENST00000551989 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
CCNT1-204ENST00000551989 TRHP20396 242 aaPredicted RBP9.18□□□□□ -0.94
CCNT1-204ENST00000551989 SHROOM4Q9ULL8 1493 aa9.17□□□□□ -0.94
CCNT1-204ENST00000551989 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
CCNT1-204ENST00000551989 ABCB7O75027 752 aa9.13□□□□□ -0.95
CCNT1-204ENST00000551989 MYO15BQ96JP2 1530 aa9.13□□□□□ -0.95
CCNT1-204ENST00000551989 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
CCNT1-204ENST00000551989 ABCC9O60706 1549 aa9.02□□□□□ -0.97
CCNT1-204ENST00000551989 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
CCNT1-204ENST00000551989 POLA2Q14181 598 aa8.95□□□□□ -0.98
CCNT1-204ENST00000551989 RBM42Q9BTD8 480 aaKnown RBP8.95□□□□□ -0.98
CCNT1-204ENST00000551989 SLC4A1APQ9BWU0 796 aaKnown RBP8.91□□□□□ -0.98
CCNT1-204ENST00000551989 NACADO15069 1562 aa8.9□□□□□ -0.98
CCNT1-204ENST00000551989 FOXD4L1Q9NU39 408 aa8.89□□□□□ -0.99
CCNT1-204ENST00000551989 ATF5Q9Y2D1 282 aaPredicted RBP8.87□□□□□ -0.99
CCNT1-204ENST00000551989 DCAF8L2P0C7V8 631 aa8.84□□□□□ -0.99
CCNT1-204ENST00000551989 RB1CC1Q8TDY2 1594 aa8.83□□□□□ -1
CCNT1-204ENST00000551989 SCRIBQ14160 1630 aa8.82□□□□□ -1
CCNT1-204ENST00000551989 CHRDL2Q6WN34 429 aa8.81□□□□□ -1
CCNT1-204ENST00000551989 ZBTB22O15209 634 aa8.76□□□□□ -1.01
CCNT1-204ENST00000551989 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
CCNT1-204ENST00000551989 RSF1Q96T23 1441 aaPredicted RBP8.76□□□□□ -1.01
CCNT1-204ENST00000551989 HRCP23327 699 aa8.75□□□□□ -1.01
CCNT1-204ENST00000551989 AKT1S1Q96B36 256 aa8.75□□□□□ -1.01
CCNT1-204ENST00000551989 BAZ1AQ9NRL2 1556 aaPredicted RBP8.69□□□□□ -1.02
CCNT1-204ENST00000551989 ATXN8OSP0DMR3 200 aa8.67□□□□□ -1.02
CCNT1-204ENST00000551989 REM2Q8IYK8 340 aaPredicted RBP8.66□□□□□ -1.02
CCNT1-204ENST00000551989 OSCARQ8IYS5 282 aa8.66□□□□□ -1.02
CCNT1-204ENST00000551989 EIF4G1Q04637 1599 aaKnown RBP8.61□□□□□ -1.03
CCNT1-204ENST00000551989 UNC13AQ9UPW8 1703 aa8.6□□□□□ -1.03
CCNT1-204ENST00000551989 MROH2BQ7Z745 1585 aa8.6□□□□□ -1.03
CCNT1-204ENST00000551989 WIZO95785 1651 aa8.59□□□□□ -1.03
CCNT1-204ENST00000551989 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
CCNT1-204ENST00000551989 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
CCNT1-204ENST00000551989 TOP2AP11388 1531 aaKnown RBP8.58□□□□□ -1.04
CCNT1-204ENST00000551989 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
CCNT1-204ENST00000551989 PCGF6Q9BYE7 350 aa8.57□□□□□ -1.04
CCNT1-204ENST00000551989 SMARCA4P51532 1647 aa8.56□□□□□ -1.04
CCNT1-204ENST00000551989 PITPNM1O00562 1244 aa8.56□□□□□ -1.04
CCNT1-204ENST00000551989 FXR2P51116 673 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCNT1-204ENST00000551989 CECR2Q9BXF3 1484 aa8.54□□□□□ -1.04
CCNT1-204ENST00000551989 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
CCNT1-204ENST00000551989 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
CCNT1-204ENST00000551989 SLC24A1O60721 1099 aa8.52□□□□□ -1.05
CCNT1-204ENST00000551989 SPDYE2BA6NHP3 402 aa8.51□□□□□ -1.05
CCNT1-204ENST00000551989 SPDYE6P0CI01 402 aa8.51□□□□□ -1.05
CCNT1-204ENST00000551989 SPDYE2Q495Y8 402 aa8.51□□□□□ -1.05
CCNT1-204ENST00000551989 PEG3Q9GZU2 1588 aa8.49□□□□□ -1.05
CCNT1-204ENST00000551989 EEA1Q15075 1411 aa8.48□□□□□ -1.05
CCNT1-204ENST00000551989 LOC105371045A0A1W2PR82 267 aa8.48□□□□□ -1.05
CCNT1-204ENST00000551989 MKRN4PQ13434 485 aaPredicted RBP8.48□□□□□ -1.05
CCNT1-204ENST00000551989 SMARCA2P51531 1590 aa8.48□□□□□ -1.05
CCNT1-204ENST00000551989 FBLN2P98095 1184 aa8.46□□□□□ -1.06
CCNT1-204ENST00000551989 SSUH2Q9Y2M2 353 aa8.42□□□□□ -1.06
CCNT1-204ENST00000551989 WRNQ14191 1432 aaPredicted RBP eCLIP8.41□□□□□ -1.06
CCNT1-204ENST00000551989 HAX1O00165 279 aa8.4□□□□□ -1.06
CCNT1-204ENST00000551989 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
CCNT1-204ENST00000551989 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
CCNT1-204ENST00000551989 EVX2Q03828 476 aa8.37□□□□□ -1.07
CCNT1-204ENST00000551989 SPDYE1Q8NFV5 336 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms