RNA–Protein interactions for RNA: ENST00000551304.5

SYT1-209, Transcript of synaptotagmin 1, humanhuman

TSL 3

Gene SYT1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-209ENST00000551304 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
SYT1-209ENST00000551304 WIZO95785 1651 aa15.25■□□□□ 0.03
SYT1-209ENST00000551304 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
SYT1-209ENST00000551304 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
SYT1-209ENST00000551304 THOC2Q8NI27 1593 aaKnown RBP15.2■□□□□ 0.02
SYT1-209ENST00000551304 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
SYT1-209ENST00000551304 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
SYT1-209ENST00000551304 RSF1Q96T23 1441 aaPredicted RBP15.15■□□□□ 0.02
SYT1-209ENST00000551304 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
SYT1-209ENST00000551304 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
SYT1-209ENST00000551304 FANCD2Q9BXW9 1451 aa15.05■□□□□ -0
SYT1-209ENST00000551304 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
SYT1-209ENST00000551304 WDR62O43379 1518 aa15.02■□□□□ -0
SYT1-209ENST00000551304 CFTRP13569 1480 aa15.02■□□□□ -0
SYT1-209ENST00000551304 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
SYT1-209ENST00000551304 C19orf67A6NJJ6 358 aa14.98□□□□□ -0.01
SYT1-209ENST00000551304 CHADLQ6NUI6 762 aa14.96□□□□□ -0.01
SYT1-209ENST00000551304 EVX2Q03828 476 aa14.92□□□□□ -0.02
SYT1-209ENST00000551304 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
SYT1-209ENST00000551304 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
SYT1-209ENST00000551304 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
SYT1-209ENST00000551304 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
SYT1-209ENST00000551304 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
SYT1-209ENST00000551304 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
SYT1-209ENST00000551304 CLCN6P51797 869 aa14.78□□□□□ -0.04
SYT1-209ENST00000551304 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
SYT1-209ENST00000551304 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
SYT1-209ENST00000551304 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
SYT1-209ENST00000551304 GABBR2O75899 941 aa14.74□□□□□ -0.05
SYT1-209ENST00000551304 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
SYT1-209ENST00000551304 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
SYT1-209ENST00000551304 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
SYT1-209ENST00000551304 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
SYT1-209ENST00000551304 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
SYT1-209ENST00000551304 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.07
SYT1-209ENST00000551304 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
SYT1-209ENST00000551304 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
SYT1-209ENST00000551304 POLA1P09884 1462 aaPredicted RBP14.61□□□□□ -0.07
SYT1-209ENST00000551304 EIF4G3O43432 1585 aaKnown RBP14.6□□□□□ -0.07
SYT1-209ENST00000551304 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
SYT1-209ENST00000551304 SOGA1O94964 1423 aa14.59□□□□□ -0.07
SYT1-209ENST00000551304 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
SYT1-209ENST00000551304 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
SYT1-209ENST00000551304 ZRANB1Q9UGI0 708 aa14.56□□□□□ -0.08
SYT1-209ENST00000551304 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
SYT1-209ENST00000551304 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
SYT1-209ENST00000551304 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
SYT1-209ENST00000551304 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
SYT1-209ENST00000551304 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
SYT1-209ENST00000551304 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
SYT1-209ENST00000551304 ARHGEF11O15085 1522 aa14.52□□□□□ -0.08
SYT1-209ENST00000551304 CUX1P39880 1505 aa14.51□□□□□ -0.09
SYT1-209ENST00000551304 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
SYT1-209ENST00000551304 DCBLD2Q96PD2 775 aa14.49□□□□□ -0.09
SYT1-209ENST00000551304 CHD1O14646 1710 aa14.49□□□□□ -0.09
SYT1-209ENST00000551304 PROM2Q8N271 834 aa14.48□□□□□ -0.09
SYT1-209ENST00000551304 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
SYT1-209ENST00000551304 SNAPC4Q5SXM2 1469 aa14.46□□□□□ -0.09
SYT1-209ENST00000551304 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
SYT1-209ENST00000551304 LHX8Q68G74 356 aa14.42□□□□□ -0.1
SYT1-209ENST00000551304 MAGI1Q96QZ7 1491 aaPredicted RBP14.39□□□□□ -0.11
SYT1-209ENST00000551304 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
SYT1-209ENST00000551304 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
SYT1-209ENST00000551304 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
SYT1-209ENST00000551304 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
SYT1-209ENST00000551304 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
SYT1-209ENST00000551304 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
SYT1-209ENST00000551304 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
SYT1-209ENST00000551304 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.11
SYT1-209ENST00000551304 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
SYT1-209ENST00000551304 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
SYT1-209ENST00000551304 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
SYT1-209ENST00000551304 MIER1Q8N108 512 aa14.28□□□□□ -0.12
SYT1-209ENST00000551304 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
SYT1-209ENST00000551304 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.13
SYT1-209ENST00000551304 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
SYT1-209ENST00000551304 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
SYT1-209ENST00000551304 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
SYT1-209ENST00000551304 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
SYT1-209ENST00000551304 GRIN2AQ12879 1464 aa14.22□□□□□ -0.13
SYT1-209ENST00000551304 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
SYT1-209ENST00000551304 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
SYT1-209ENST00000551304 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
SYT1-209ENST00000551304 ADAMTS12P58397 1594 aa14.18□□□□□ -0.14
SYT1-209ENST00000551304 NUP160Q12769 1436 aa14.16□□□□□ -0.14
SYT1-209ENST00000551304 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
SYT1-209ENST00000551304 CEP170Q5SW79 1584 aa14.15□□□□□ -0.14
SYT1-209ENST00000551304 ERCC6L2Q5T890 1561 aa14.14□□□□□ -0.15
SYT1-209ENST00000551304 FKBP8Q14318 412 aa14.13□□□□□ -0.15
SYT1-209ENST00000551304 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
SYT1-209ENST00000551304 MS4A3Q96HJ5 214 aa14.09□□□□□ -0.15
SYT1-209ENST00000551304 CCDC61Q9Y6R9 512 aa14.09□□□□□ -0.15
SYT1-209ENST00000551304 PRG4Q92954 1404 aaPredicted RBP14.08□□□□□ -0.15
SYT1-209ENST00000551304 IGF1RP08069 1367 aa14.05□□□□□ -0.16
SYT1-209ENST00000551304 KIF27Q86VH2 1401 aa14.05□□□□□ -0.16
SYT1-209ENST00000551304 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
SYT1-209ENST00000551304 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
SYT1-209ENST00000551304 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
SYT1-209ENST00000551304 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
SYT1-209ENST00000551304 C7P10643 843 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms