RNA–Protein interactions for RNA: ENST00000551304.5

SYT1-209, Transcript of synaptotagmin 1, humanhuman

TSL 3

Gene SYT1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-209ENST00000551304 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
SYT1-209ENST00000551304 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
SYT1-209ENST00000551304 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
SYT1-209ENST00000551304 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
SYT1-209ENST00000551304 FOXD1Q16676 465 aa22.76■■□□□ 1.23
SYT1-209ENST00000551304 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.09
SYT1-209ENST00000551304 MSH5O43196 834 aa21.53■■□□□ 1.04
SYT1-209ENST00000551304 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
SYT1-209ENST00000551304 ADRA2BP18089 450 aa21.18■□□□□ 0.98
SYT1-209ENST00000551304 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
SYT1-209ENST00000551304 POTEDQ86YR6 584 aa20.82■□□□□ 0.92
SYT1-209ENST00000551304 NISCHQ9Y2I1 1504 aa20.02■□□□□ 0.8
SYT1-209ENST00000551304 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
SYT1-209ENST00000551304 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
SYT1-209ENST00000551304 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
SYT1-209ENST00000551304 PPP4R3CPQ6ZMV5 832 aa19.1■□□□□ 0.65
SYT1-209ENST00000551304 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
SYT1-209ENST00000551304 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
SYT1-209ENST00000551304 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
SYT1-209ENST00000551304 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
SYT1-209ENST00000551304 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
SYT1-209ENST00000551304 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
SYT1-209ENST00000551304 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
SYT1-209ENST00000551304 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
SYT1-209ENST00000551304 C1QBPQ07021 282 aaKnown RBP18.09■□□□□ 0.49
SYT1-209ENST00000551304 NPM3O75607 178 aaKnown RBP18.06■□□□□ 0.48
SYT1-209ENST00000551304 ABCC9O60706 1549 aa18■□□□□ 0.47
SYT1-209ENST00000551304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
SYT1-209ENST00000551304 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
SYT1-209ENST00000551304 KCNA4P22459 653 aa17.66■□□□□ 0.42
SYT1-209ENST00000551304 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
SYT1-209ENST00000551304 APLP2Q06481 763 aa17.28■□□□□ 0.36
SYT1-209ENST00000551304 CAPN15O75808 1086 aa17.25■□□□□ 0.35
SYT1-209ENST00000551304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
SYT1-209ENST00000551304 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
SYT1-209ENST00000551304 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
SYT1-209ENST00000551304 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
SYT1-209ENST00000551304 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
SYT1-209ENST00000551304 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
SYT1-209ENST00000551304 DSG3P32926 999 aa17.06■□□□□ 0.32
SYT1-209ENST00000551304 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
SYT1-209ENST00000551304 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
SYT1-209ENST00000551304 NACADO15069 1562 aa16.95■□□□□ 0.3
SYT1-209ENST00000551304 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
SYT1-209ENST00000551304 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
SYT1-209ENST00000551304 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
SYT1-209ENST00000551304 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
SYT1-209ENST00000551304 ABCB7O75027 752 aa16.74■□□□□ 0.27
SYT1-209ENST00000551304 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
SYT1-209ENST00000551304 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
SYT1-209ENST00000551304 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
SYT1-209ENST00000551304 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
SYT1-209ENST00000551304 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
SYT1-209ENST00000551304 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
SYT1-209ENST00000551304 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
SYT1-209ENST00000551304 POLA2Q14181 598 aa16.46■□□□□ 0.23
SYT1-209ENST00000551304 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
SYT1-209ENST00000551304 POTEHQ6S545 545 aa16.38■□□□□ 0.21
SYT1-209ENST00000551304 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
SYT1-209ENST00000551304 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
SYT1-209ENST00000551304 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
SYT1-209ENST00000551304 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
SYT1-209ENST00000551304 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
SYT1-209ENST00000551304 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
SYT1-209ENST00000551304 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
SYT1-209ENST00000551304 ZBTB22O15209 634 aa16.14■□□□□ 0.17
SYT1-209ENST00000551304 AKT1S1Q96B36 256 aa16.02■□□□□ 0.16
SYT1-209ENST00000551304 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
SYT1-209ENST00000551304 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
SYT1-209ENST00000551304 FBLN2P98095 1184 aa15.89■□□□□ 0.13
SYT1-209ENST00000551304 REM2Q8IYK8 340 aaPredicted RBP15.78■□□□□ 0.12
SYT1-209ENST00000551304 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
SYT1-209ENST00000551304 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
SYT1-209ENST00000551304 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
SYT1-209ENST00000551304 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
SYT1-209ENST00000551304 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
SYT1-209ENST00000551304 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
SYT1-209ENST00000551304 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
SYT1-209ENST00000551304 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
SYT1-209ENST00000551304 ERCC6Q03468 1493 aa15.56■□□□□ 0.08
SYT1-209ENST00000551304 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
SYT1-209ENST00000551304 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
SYT1-209ENST00000551304 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
SYT1-209ENST00000551304 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
SYT1-209ENST00000551304 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
SYT1-209ENST00000551304 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
SYT1-209ENST00000551304 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
SYT1-209ENST00000551304 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
SYT1-209ENST00000551304 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
SYT1-209ENST00000551304 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
SYT1-209ENST00000551304 NESP48681 1621 aa15.45■□□□□ 0.06
SYT1-209ENST00000551304 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
SYT1-209ENST00000551304 CUX2O14529 1486 aa15.44■□□□□ 0.06
SYT1-209ENST00000551304 SSUH2Q9Y2M2 353 aa15.42■□□□□ 0.06
SYT1-209ENST00000551304 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
SYT1-209ENST00000551304 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
SYT1-209ENST00000551304 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
SYT1-209ENST00000551304 HAX1O00165 279 aa15.35■□□□□ 0.05
SYT1-209ENST00000551304 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
SYT1-209ENST00000551304 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms