RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 IGF1RP08069 1367 aa23.7■■□□□ 1.39
ASIC1-206ENST00000550558 KIF21BO75037 1637 aa23.7■■□□□ 1.38
ASIC1-206ENST00000550558 DNAJC5BQ9UF47 199 aa23.7■■□□□ 1.38
ASIC1-206ENST00000550558 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
ASIC1-206ENST00000550558 FKBP8Q14318 412 aa23.66■■□□□ 1.38
ASIC1-206ENST00000550558 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
ASIC1-206ENST00000550558 RAD54L2Q9Y4B4 1467 aa23.66■■□□□ 1.38
ASIC1-206ENST00000550558 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
ASIC1-206ENST00000550558 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
ASIC1-206ENST00000550558 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
ASIC1-206ENST00000550558 FOXD1Q16676 465 aa23.63■■□□□ 1.37
ASIC1-206ENST00000550558 FGD5Q6ZNL6 1462 aa23.6■■□□□ 1.37
ASIC1-206ENST00000550558 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
ASIC1-206ENST00000550558 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.36
ASIC1-206ENST00000550558 CDK11AQ9UQ88 783 aaPredicted RBP23.58■■□□□ 1.36
ASIC1-206ENST00000550558 CUX1P39880 1505 aa23.57■■□□□ 1.36
ASIC1-206ENST00000550558 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
ASIC1-206ENST00000550558 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
ASIC1-206ENST00000550558 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
ASIC1-206ENST00000550558 NESP48681 1621 aa23.55■■□□□ 1.36
ASIC1-206ENST00000550558 SETD5Q9C0A6 1442 aa23.53■■□□□ 1.36
ASIC1-206ENST00000550558 KDM2AQ9Y2K7 1162 aa23.52■■□□□ 1.36
ASIC1-206ENST00000550558 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
ASIC1-206ENST00000550558 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
ASIC1-206ENST00000550558 ERICH6Q7L0X2 663 aa23.51■■□□□ 1.35
ASIC1-206ENST00000550558 CFTRP13569 1480 aa23.5■■□□□ 1.35
ASIC1-206ENST00000550558 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
ASIC1-206ENST00000550558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.35
ASIC1-206ENST00000550558 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
ASIC1-206ENST00000550558 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
ASIC1-206ENST00000550558 PHLDB1Q86UU1 1377 aa23.45■■□□□ 1.34
ASIC1-206ENST00000550558 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
ASIC1-206ENST00000550558 CFDP1Q9UEE9 299 aaPredicted RBP23.4■■□□□ 1.34
ASIC1-206ENST00000550558 EIF4G2P78344 907 aaKnown RBP eCLIP23.35■■□□□ 1.33
ASIC1-206ENST00000550558 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
ASIC1-206ENST00000550558 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.32
ASIC1-206ENST00000550558 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
ASIC1-206ENST00000550558 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
ASIC1-206ENST00000550558 SUPT16HQ9Y5B9 1047 aaKnown RBP23.32■■□□□ 1.32
ASIC1-206ENST00000550558 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
ASIC1-206ENST00000550558 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
ASIC1-206ENST00000550558 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
ASIC1-206ENST00000550558 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
ASIC1-206ENST00000550558 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
ASIC1-206ENST00000550558 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
ASIC1-206ENST00000550558 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
ASIC1-206ENST00000550558 HMGXB3Q12766 1538 aa23.25■■□□□ 1.31
ASIC1-206ENST00000550558 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
ASIC1-206ENST00000550558 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
ASIC1-206ENST00000550558 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.31
ASIC1-206ENST00000550558 HSPA5P11021 654 aaKnown RBP23.22■■□□□ 1.31
ASIC1-206ENST00000550558 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
ASIC1-206ENST00000550558 ZNF644Q9H582 1327 aaPredicted RBP23.2■■□□□ 1.3
ASIC1-206ENST00000550558 MPHOSPH9Q99550 1183 aa23.2■■□□□ 1.3
ASIC1-206ENST00000550558 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
ASIC1-206ENST00000550558 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
ASIC1-206ENST00000550558 L3MBTL2Q969R5 705 aa23.17■■□□□ 1.3
ASIC1-206ENST00000550558 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
ASIC1-206ENST00000550558 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
ASIC1-206ENST00000550558 TMC1Q8TDI8 760 aa23.09■■□□□ 1.29
ASIC1-206ENST00000550558 PKD2Q13563 968 aa23.08■■□□□ 1.28
ASIC1-206ENST00000550558 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
ASIC1-206ENST00000550558 FGD6Q6ZV73 1430 aa23.05■■□□□ 1.28
ASIC1-206ENST00000550558 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
ASIC1-206ENST00000550558 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
ASIC1-206ENST00000550558 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
ASIC1-206ENST00000550558 JPH4Q96JJ6 628 aa23.02■■□□□ 1.28
ASIC1-206ENST00000550558 DCAF11Q8TEB1 546 aa23.01■■□□□ 1.27
ASIC1-206ENST00000550558 HNRNPMP52272 730 aaKnown RBP eCLIP23.01■■□□□ 1.27
ASIC1-206ENST00000550558 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
ASIC1-206ENST00000550558 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
ASIC1-206ENST00000550558 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
ASIC1-206ENST00000550558 NCOA2Q15596 1464 aa22.94■■□□□ 1.26
ASIC1-206ENST00000550558 MYOM3Q5VTT5 1437 aa22.9■■□□□ 1.26
ASIC1-206ENST00000550558 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.25
ASIC1-206ENST00000550558 NUP155O75694 1391 aa22.89■■□□□ 1.25
ASIC1-206ENST00000550558 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
ASIC1-206ENST00000550558 CCER2I3L3R5 266 aa22.87■■□□□ 1.25
ASIC1-206ENST00000550558 B4GALNT3Q6L9W6 998 aa22.87■■□□□ 1.25
ASIC1-206ENST00000550558 NPM2Q86SE8 214 aaKnown RBP22.85■■□□□ 1.25
ASIC1-206ENST00000550558 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
ASIC1-206ENST00000550558 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
ASIC1-206ENST00000550558 FYCO1Q9BQS8 1478 aa22.83■■□□□ 1.25
ASIC1-206ENST00000550558 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
ASIC1-206ENST00000550558 CC2D1BQ5T0F9 858 aaKnown RBP22.82■■□□□ 1.24
ASIC1-206ENST00000550558 CCDC136Q96JN2 1154 aa22.82■■□□□ 1.24
ASIC1-206ENST00000550558 MYT1Q01538 1121 aa22.81■■□□□ 1.24
ASIC1-206ENST00000550558 TSHZ2Q9NRE2 1034 aa22.8■■□□□ 1.24
ASIC1-206ENST00000550558 UACAQ9BZF9 1416 aa22.79■■□□□ 1.24
ASIC1-206ENST00000550558 CARMIL2Q6F5E8 1435 aa22.77■■□□□ 1.24
ASIC1-206ENST00000550558 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
ASIC1-206ENST00000550558 CDK13Q14004 1512 aaKnown RBP22.76■■□□□ 1.23
ASIC1-206ENST00000550558 CCDC184Q52MB2 194 aa22.74■■□□□ 1.23
ASIC1-206ENST00000550558 NBPF8Q3BBV2 869 aa22.74■■□□□ 1.23
ASIC1-206ENST00000550558 BCL11AQ9H165 835 aa22.73■■□□□ 1.23
ASIC1-206ENST00000550558 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
ASIC1-206ENST00000550558 PTPRKQ15262 1439 aa22.71■■□□□ 1.23
ASIC1-206ENST00000550558 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
ASIC1-206ENST00000550558 ST20-MTHFSA0A0A6YYL1 179 aa22.71■■□□□ 1.23
ASIC1-206ENST00000550558 ANKRD30AQ9BXX3 1397 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms