RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
ASIC1-206ENST00000550558 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
ASIC1-206ENST00000550558 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
ASIC1-206ENST00000550558 SUPT5HO00267 1087 aaKnown RBP29.58■■■□□ 2.33
ASIC1-206ENST00000550558 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
ASIC1-206ENST00000550558 FAM9AQ8IZU1 332 aaPredicted RBP27.7■■■□□ 2.02
ASIC1-206ENST00000550558 PCGF6Q9BYE7 350 aa27.58■■■□□ 2.01
ASIC1-206ENST00000550558 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
ASIC1-206ENST00000550558 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
ASIC1-206ENST00000550558 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
ASIC1-206ENST00000550558 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
ASIC1-206ENST00000550558 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
ASIC1-206ENST00000550558 ABCC9O60706 1549 aa26.96■■□□□ 1.91
ASIC1-206ENST00000550558 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
ASIC1-206ENST00000550558 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
ASIC1-206ENST00000550558 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
ASIC1-206ENST00000550558 HRCP23327 699 aa26.58■■□□□ 1.85
ASIC1-206ENST00000550558 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
ASIC1-206ENST00000550558 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
ASIC1-206ENST00000550558 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
ASIC1-206ENST00000550558 TRIM26Q12899 539 aaPredicted RBP26.36■■□□□ 1.81
ASIC1-206ENST00000550558 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
ASIC1-206ENST00000550558 CCER1Q8TC90 406 aaPredicted RBP26.16■■□□□ 1.78
ASIC1-206ENST00000550558 APLP2Q06481 763 aa26.05■■□□□ 1.76
ASIC1-206ENST00000550558 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
ASIC1-206ENST00000550558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
ASIC1-206ENST00000550558 ZEB1P37275 1124 aaPredicted RBP25.84■■□□□ 1.73
ASIC1-206ENST00000550558 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
ASIC1-206ENST00000550558 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
ASIC1-206ENST00000550558 DCAF1Q9Y4B6 1507 aa25.71■■□□□ 1.71
ASIC1-206ENST00000550558 ATP1B4Q9UN42 357 aaPredicted RBP25.71■■□□□ 1.71
ASIC1-206ENST00000550558 ITGAEP38570 1179 aa25.53■■□□□ 1.68
ASIC1-206ENST00000550558 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
ASIC1-206ENST00000550558 YTHDC1Q96MU7 727 aaKnown RBP25.49■■□□□ 1.67
ASIC1-206ENST00000550558 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
ASIC1-206ENST00000550558 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
ASIC1-206ENST00000550558 NACADO15069 1562 aa25.35■■□□□ 1.65
ASIC1-206ENST00000550558 WIZO95785 1651 aa25.16■■□□□ 1.62
ASIC1-206ENST00000550558 DIEXFQ68CQ4 756 aaKnown RBP25.13■■□□□ 1.61
ASIC1-206ENST00000550558 CENPBP07199 599 aaPredicted RBP25.1■■□□□ 1.61
ASIC1-206ENST00000550558 ABCC8Q09428 1581 aa25.06■■□□□ 1.6
ASIC1-206ENST00000550558 SOGA1O94964 1423 aa25.04■■□□□ 1.6
ASIC1-206ENST00000550558 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
ASIC1-206ENST00000550558 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
ASIC1-206ENST00000550558 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
ASIC1-206ENST00000550558 CEP162Q5TB80 1403 aa24.92■■□□□ 1.58
ASIC1-206ENST00000550558 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
ASIC1-206ENST00000550558 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
ASIC1-206ENST00000550558 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
ASIC1-206ENST00000550558 BAZ1BQ9UIG0 1483 aaKnown RBP24.72■■□□□ 1.55
ASIC1-206ENST00000550558 ARID3CA6NKF2 412 aa24.72■■□□□ 1.55
ASIC1-206ENST00000550558 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
ASIC1-206ENST00000550558 CLIP1P30622 1438 aa24.71■■□□□ 1.55
ASIC1-206ENST00000550558 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
ASIC1-206ENST00000550558 GTF3C3Q9Y5Q9 886 aa24.66■■□□□ 1.54
ASIC1-206ENST00000550558 TNIKQ9UKE5 1360 aa24.64■■□□□ 1.54
ASIC1-206ENST00000550558 GOLGA3Q08378 1498 aa24.6■■□□□ 1.53
ASIC1-206ENST00000550558 CNGB1Q14028 1251 aaPredicted RBP24.56■■□□□ 1.52
ASIC1-206ENST00000550558 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
ASIC1-206ENST00000550558 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
ASIC1-206ENST00000550558 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
ASIC1-206ENST00000550558 ACIN1Q9UKV3 1341 aaKnown RBP24.49■■□□□ 1.51
ASIC1-206ENST00000550558 EEA1Q15075 1411 aa24.47■■□□□ 1.51
ASIC1-206ENST00000550558 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
ASIC1-206ENST00000550558 MIER1Q8N108 512 aa24.4■■□□□ 1.5
ASIC1-206ENST00000550558 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
ASIC1-206ENST00000550558 KANK4Q5T7N3 995 aaPredicted RBP24.37■■□□□ 1.49
ASIC1-206ENST00000550558 FBLN2P98095 1184 aa24.36■■□□□ 1.49
ASIC1-206ENST00000550558 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
ASIC1-206ENST00000550558 POLR3GLQ9BT43 218 aa24.35■■□□□ 1.49
ASIC1-206ENST00000550558 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
ASIC1-206ENST00000550558 TRIM52Q96A61 297 aa24.31■■□□□ 1.48
ASIC1-206ENST00000550558 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
ASIC1-206ENST00000550558 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
ASIC1-206ENST00000550558 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
ASIC1-206ENST00000550558 CHIC2Q9UKJ5 165 aa24.19■■□□□ 1.46
ASIC1-206ENST00000550558 BCANQ96GW7 911 aa24.19■■□□□ 1.46
ASIC1-206ENST00000550558 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
ASIC1-206ENST00000550558 DDX10Q13206 875 aaKnown RBP24.13■■□□□ 1.45
ASIC1-206ENST00000550558 CUX2O14529 1486 aa24.13■■□□□ 1.45
ASIC1-206ENST00000550558 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.44
ASIC1-206ENST00000550558 NEFLP07196 543 aa24.06■■□□□ 1.44
ASIC1-206ENST00000550558 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
ASIC1-206ENST00000550558 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
ASIC1-206ENST00000550558 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
ASIC1-206ENST00000550558 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
ASIC1-206ENST00000550558 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
ASIC1-206ENST00000550558 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
ASIC1-206ENST00000550558 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
ASIC1-206ENST00000550558 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
ASIC1-206ENST00000550558 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
ASIC1-206ENST00000550558 ANP32CO43423 234 aa23.87■■□□□ 1.41
ASIC1-206ENST00000550558 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
ASIC1-206ENST00000550558 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
ASIC1-206ENST00000550558 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.41
ASIC1-206ENST00000550558 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
ASIC1-206ENST00000550558 FHOD3Q2V2M9 1422 aa23.73■■□□□ 1.39
ASIC1-206ENST00000550558 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
ASIC1-206ENST00000550558 SENP3-EIF4A1A0A087X0R7 540 aa23.71■■□□□ 1.39
ASIC1-206ENST00000550558 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms