RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
NPAS3-207ENST00000549770 CUX1P39880 1505 aa11.32□□□□□ -0.6
NPAS3-207ENST00000549770 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-207ENST00000549770 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
NPAS3-207ENST00000549770 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
NPAS3-207ENST00000549770 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
NPAS3-207ENST00000549770 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
NPAS3-207ENST00000549770 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPAS3-207ENST00000549770 SOGA1O94964 1423 aa11.26□□□□□ -0.61
NPAS3-207ENST00000549770 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
NPAS3-207ENST00000549770 OSCARQ8IYS5 282 aa11.21□□□□□ -0.61
NPAS3-207ENST00000549770 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
NPAS3-207ENST00000549770 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
NPAS3-207ENST00000549770 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
NPAS3-207ENST00000549770 CHD1O14646 1710 aa11.2□□□□□ -0.62
NPAS3-207ENST00000549770 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
NPAS3-207ENST00000549770 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
NPAS3-207ENST00000549770 FBLN2P98095 1184 aa11.18□□□□□ -0.62
NPAS3-207ENST00000549770 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
NPAS3-207ENST00000549770 SNAPC4Q5SXM2 1469 aa11.16□□□□□ -0.62
NPAS3-207ENST00000549770 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
NPAS3-207ENST00000549770 ABCA10Q8WWZ4 1543 aa11.14□□□□□ -0.63
NPAS3-207ENST00000549770 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
NPAS3-207ENST00000549770 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
NPAS3-207ENST00000549770 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
NPAS3-207ENST00000549770 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
NPAS3-207ENST00000549770 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
NPAS3-207ENST00000549770 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
NPAS3-207ENST00000549770 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
NPAS3-207ENST00000549770 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
NPAS3-207ENST00000549770 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
NPAS3-207ENST00000549770 CHMP7Q8WUX9 453 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-207ENST00000549770 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
NPAS3-207ENST00000549770 ARHGEF11O15085 1522 aa11.06□□□□□ -0.64
NPAS3-207ENST00000549770 ADAMTS12P58397 1594 aa11.03□□□□□ -0.64
NPAS3-207ENST00000549770 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
NPAS3-207ENST00000549770 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
NPAS3-207ENST00000549770 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
NPAS3-207ENST00000549770 GRIN2AQ12879 1464 aa11□□□□□ -0.65
NPAS3-207ENST00000549770 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
NPAS3-207ENST00000549770 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
NPAS3-207ENST00000549770 CYB5RLQ6IPT4 315 aa10.98□□□□□ -0.65
NPAS3-207ENST00000549770 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
NPAS3-207ENST00000549770 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
NPAS3-207ENST00000549770 KIF27Q86VH2 1401 aa10.94□□□□□ -0.66
NPAS3-207ENST00000549770 NUP160Q12769 1436 aa10.93□□□□□ -0.66
NPAS3-207ENST00000549770 IGF1RP08069 1367 aa10.92□□□□□ -0.66
NPAS3-207ENST00000549770 ERCC6L2Q5T890 1561 aa10.92□□□□□ -0.66
NPAS3-207ENST00000549770 CUL7Q14999 1698 aa10.9□□□□□ -0.66
NPAS3-207ENST00000549770 AKT1S1Q96B36 256 aa10.9□□□□□ -0.66
NPAS3-207ENST00000549770 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
NPAS3-207ENST00000549770 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
NPAS3-207ENST00000549770 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
NPAS3-207ENST00000549770 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
NPAS3-207ENST00000549770 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
NPAS3-207ENST00000549770 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
NPAS3-207ENST00000549770 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
NPAS3-207ENST00000549770 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
NPAS3-207ENST00000549770 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
NPAS3-207ENST00000549770 KIAA0586Q9BVV6 1533 aa10.8□□□□□ -0.68
NPAS3-207ENST00000549770 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
NPAS3-207ENST00000549770 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
NPAS3-207ENST00000549770 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
NPAS3-207ENST00000549770 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
NPAS3-207ENST00000549770 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
NPAS3-207ENST00000549770 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
NPAS3-207ENST00000549770 FAM9AQ8IZU1 332 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-207ENST00000549770 CTTNBP2Q8WZ74 1663 aa10.72□□□□□ -0.69
NPAS3-207ENST00000549770 PRXQ9BXM0 1461 aa10.71□□□□□ -0.69
NPAS3-207ENST00000549770 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
NPAS3-207ENST00000549770 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
NPAS3-207ENST00000549770 DISP1Q96F81 1524 aa10.69□□□□□ -0.7
NPAS3-207ENST00000549770 PTPRGP23470 1445 aa10.68□□□□□ -0.7
NPAS3-207ENST00000549770 PITPNM1O00562 1244 aa10.68□□□□□ -0.7
NPAS3-207ENST00000549770 PIP4P2Q8N4L2 257 aa10.68□□□□□ -0.7
NPAS3-207ENST00000549770 UGGT2Q9NYU1 1516 aa10.68□□□□□ -0.7
NPAS3-207ENST00000549770 TNIKQ9UKE5 1360 aa10.67□□□□□ -0.7
NPAS3-207ENST00000549770 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
NPAS3-207ENST00000549770 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
NPAS3-207ENST00000549770 HAX1O00165 279 aa10.65□□□□□ -0.7
NPAS3-207ENST00000549770 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
NPAS3-207ENST00000549770 KIF13AQ9H1H9 1805 aa10.65□□□□□ -0.71
NPAS3-207ENST00000549770 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
NPAS3-207ENST00000549770 EEA1Q15075 1411 aa10.64□□□□□ -0.71
NPAS3-207ENST00000549770 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
NPAS3-207ENST00000549770 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
NPAS3-207ENST00000549770 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
NPAS3-207ENST00000549770 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
NPAS3-207ENST00000549770 UACAQ9BZF9 1416 aa10.6□□□□□ -0.71
NPAS3-207ENST00000549770 ABCC2Q92887 1545 aa10.6□□□□□ -0.71
NPAS3-207ENST00000549770 GOLGA3Q08378 1498 aa10.6□□□□□ -0.71
NPAS3-207ENST00000549770 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
NPAS3-207ENST00000549770 PLB1Q6P1J6 1458 aa10.59□□□□□ -0.71
NPAS3-207ENST00000549770 DIP2BQ9P265 1576 aa10.59□□□□□ -0.71
NPAS3-207ENST00000549770 KIF21BO75037 1637 aa10.58□□□□□ -0.72
NPAS3-207ENST00000549770 ABCC10Q5T3U5 1492 aa10.58□□□□□ -0.72
NPAS3-207ENST00000549770 UHRF1BP1LA0JNW5 1464 aa10.57□□□□□ -0.72
NPAS3-207ENST00000549770 ZCCHC11Q5TAX3 1644 aaKnown RBP10.57□□□□□ -0.72
NPAS3-207ENST00000549770 TSPOAP1O95153 1857 aa10.56□□□□□ -0.72
NPAS3-207ENST00000549770 ASXL2Q76L83 1435 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms