RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
NPAS3-207ENST00000549770 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
NPAS3-207ENST00000549770 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
NPAS3-207ENST00000549770 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
NPAS3-207ENST00000549770 FOXD1Q16676 465 aa15.61■□□□□ 0.09
NPAS3-207ENST00000549770 NISCHQ9Y2I1 1504 aa15.6■□□□□ 0.09
NPAS3-207ENST00000549770 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
NPAS3-207ENST00000549770 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
NPAS3-207ENST00000549770 MSH5O43196 834 aa14.73□□□□□ -0.05
NPAS3-207ENST00000549770 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
NPAS3-207ENST00000549770 ADRA2BP18089 450 aa14.72□□□□□ -0.05
NPAS3-207ENST00000549770 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
NPAS3-207ENST00000549770 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
NPAS3-207ENST00000549770 ABCC9O60706 1549 aa13.76□□□□□ -0.21
NPAS3-207ENST00000549770 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
NPAS3-207ENST00000549770 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
NPAS3-207ENST00000549770 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
NPAS3-207ENST00000549770 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
NPAS3-207ENST00000549770 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
NPAS3-207ENST00000549770 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
NPAS3-207ENST00000549770 NACADO15069 1562 aa13.08□□□□□ -0.32
NPAS3-207ENST00000549770 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
NPAS3-207ENST00000549770 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
NPAS3-207ENST00000549770 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
NPAS3-207ENST00000549770 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
NPAS3-207ENST00000549770 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
NPAS3-207ENST00000549770 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
NPAS3-207ENST00000549770 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-207ENST00000549770 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-207ENST00000549770 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
NPAS3-207ENST00000549770 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPAS3-207ENST00000549770 KCNA4P22459 653 aa12.83□□□□□ -0.36
NPAS3-207ENST00000549770 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
NPAS3-207ENST00000549770 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
NPAS3-207ENST00000549770 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.37
NPAS3-207ENST00000549770 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
NPAS3-207ENST00000549770 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
NPAS3-207ENST00000549770 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
NPAS3-207ENST00000549770 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
NPAS3-207ENST00000549770 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
NPAS3-207ENST00000549770 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
NPAS3-207ENST00000549770 CECR2Q9BXF3 1484 aa12.34□□□□□ -0.43
NPAS3-207ENST00000549770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
NPAS3-207ENST00000549770 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
NPAS3-207ENST00000549770 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
NPAS3-207ENST00000549770 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
NPAS3-207ENST00000549770 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
NPAS3-207ENST00000549770 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
NPAS3-207ENST00000549770 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.47
NPAS3-207ENST00000549770 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
NPAS3-207ENST00000549770 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
NPAS3-207ENST00000549770 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
NPAS3-207ENST00000549770 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
NPAS3-207ENST00000549770 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
NPAS3-207ENST00000549770 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
NPAS3-207ENST00000549770 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
NPAS3-207ENST00000549770 WIZO95785 1651 aa11.94□□□□□ -0.5
NPAS3-207ENST00000549770 NESP48681 1621 aa11.89□□□□□ -0.51
NPAS3-207ENST00000549770 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
NPAS3-207ENST00000549770 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
NPAS3-207ENST00000549770 ERCC6Q03468 1493 aa11.85□□□□□ -0.51
NPAS3-207ENST00000549770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
NPAS3-207ENST00000549770 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
NPAS3-207ENST00000549770 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-207ENST00000549770 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
NPAS3-207ENST00000549770 CAPN15O75808 1086 aa11.81□□□□□ -0.52
NPAS3-207ENST00000549770 ZBTB22O15209 634 aa11.79□□□□□ -0.52
NPAS3-207ENST00000549770 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
NPAS3-207ENST00000549770 APLP2Q06481 763 aa11.78□□□□□ -0.52
NPAS3-207ENST00000549770 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
NPAS3-207ENST00000549770 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
NPAS3-207ENST00000549770 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
NPAS3-207ENST00000549770 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
NPAS3-207ENST00000549770 CUX2O14529 1486 aa11.7□□□□□ -0.54
NPAS3-207ENST00000549770 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
NPAS3-207ENST00000549770 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
NPAS3-207ENST00000549770 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
NPAS3-207ENST00000549770 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-207ENST00000549770 POTEHQ6S545 545 aa11.65□□□□□ -0.54
NPAS3-207ENST00000549770 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
NPAS3-207ENST00000549770 DSG3P32926 999 aa11.63□□□□□ -0.55
NPAS3-207ENST00000549770 CFTRP13569 1480 aa11.63□□□□□ -0.55
NPAS3-207ENST00000549770 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
NPAS3-207ENST00000549770 CEP164Q9UPV0 1460 aa11.61□□□□□ -0.55
NPAS3-207ENST00000549770 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
NPAS3-207ENST00000549770 EHMT2Q96KQ7 1210 aa11.6□□□□□ -0.55
NPAS3-207ENST00000549770 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
NPAS3-207ENST00000549770 WDR62O43379 1518 aa11.56□□□□□ -0.56
NPAS3-207ENST00000549770 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
NPAS3-207ENST00000549770 ABCB7O75027 752 aa11.56□□□□□ -0.56
NPAS3-207ENST00000549770 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
NPAS3-207ENST00000549770 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
NPAS3-207ENST00000549770 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
NPAS3-207ENST00000549770 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
NPAS3-207ENST00000549770 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
NPAS3-207ENST00000549770 POLA2Q14181 598 aa11.43□□□□□ -0.58
NPAS3-207ENST00000549770 TOPBP1Q92547 1522 aa11.42□□□□□ -0.58
NPAS3-207ENST00000549770 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
NPAS3-207ENST00000549770 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
NPAS3-207ENST00000549770 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms