RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
TMEM116-208ENST00000549537 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
TMEM116-208ENST00000549537 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
TMEM116-208ENST00000549537 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
TMEM116-208ENST00000549537 CFTRP13569 1480 aa12.39□□□□□ -0.43
TMEM116-208ENST00000549537 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-208ENST00000549537 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
TMEM116-208ENST00000549537 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
TMEM116-208ENST00000549537 MRC2Q9UBG0 1479 aa12.35□□□□□ -0.43
TMEM116-208ENST00000549537 WDR62O43379 1518 aa12.34□□□□□ -0.43
TMEM116-208ENST00000549537 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
TMEM116-208ENST00000549537 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
TMEM116-208ENST00000549537 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
TMEM116-208ENST00000549537 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
TMEM116-208ENST00000549537 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
TMEM116-208ENST00000549537 EVX2Q03828 476 aa12.25□□□□□ -0.45
TMEM116-208ENST00000549537 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
TMEM116-208ENST00000549537 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
TMEM116-208ENST00000549537 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
TMEM116-208ENST00000549537 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
TMEM116-208ENST00000549537 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
TMEM116-208ENST00000549537 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
TMEM116-208ENST00000549537 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
TMEM116-208ENST00000549537 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
TMEM116-208ENST00000549537 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
TMEM116-208ENST00000549537 GABBR2O75899 941 aa12.07□□□□□ -0.48
TMEM116-208ENST00000549537 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-208ENST00000549537 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
TMEM116-208ENST00000549537 CLCN6P51797 869 aa12.03□□□□□ -0.48
TMEM116-208ENST00000549537 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
TMEM116-208ENST00000549537 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
TMEM116-208ENST00000549537 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
TMEM116-208ENST00000549537 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
TMEM116-208ENST00000549537 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
TMEM116-208ENST00000549537 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
TMEM116-208ENST00000549537 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
TMEM116-208ENST00000549537 CUX1P39880 1505 aa11.99□□□□□ -0.49
TMEM116-208ENST00000549537 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
TMEM116-208ENST00000549537 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
TMEM116-208ENST00000549537 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
TMEM116-208ENST00000549537 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.58e-7■■■■■ 28.7
TMEM116-208ENST00000549537 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
TMEM116-208ENST00000549537 SOGA1O94964 1423 aa11.93□□□□□ -0.5
TMEM116-208ENST00000549537 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
TMEM116-208ENST00000549537 LHX8Q68G74 356 aa11.91□□□□□ -0.5
TMEM116-208ENST00000549537 ARHGEF11O15085 1522 aa11.9□□□□□ -0.5
TMEM116-208ENST00000549537 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
TMEM116-208ENST00000549537 CHD1O14646 1710 aa11.88□□□□□ -0.51
TMEM116-208ENST00000549537 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
TMEM116-208ENST00000549537 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
TMEM116-208ENST00000549537 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
TMEM116-208ENST00000549537 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
TMEM116-208ENST00000549537 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
TMEM116-208ENST00000549537 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
TMEM116-208ENST00000549537 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
TMEM116-208ENST00000549537 MAGI1Q96QZ7 1491 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-208ENST00000549537 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
TMEM116-208ENST00000549537 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
TMEM116-208ENST00000549537 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
TMEM116-208ENST00000549537 GAPVD1Q14C86 1478 aa11.8□□□□□ -0.52
TMEM116-208ENST00000549537 DCBLD2Q96PD2 775 aa11.79□□□□□ -0.52
TMEM116-208ENST00000549537 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
TMEM116-208ENST00000549537 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
TMEM116-208ENST00000549537 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
TMEM116-208ENST00000549537 SYNJ2O15056 1496 aa11.77□□□□□ -0.52
TMEM116-208ENST00000549537 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.52
TMEM116-208ENST00000549537 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
TMEM116-208ENST00000549537 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
TMEM116-208ENST00000549537 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-208ENST00000549537 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
TMEM116-208ENST00000549537 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
TMEM116-208ENST00000549537 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
TMEM116-208ENST00000549537 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM116-208ENST00000549537 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
TMEM116-208ENST00000549537 ERICH3Q5RHP9 1530 aa11.69□□□□□ -0.54
TMEM116-208ENST00000549537 GRIN2AQ12879 1464 aa11.68□□□□□ -0.54
TMEM116-208ENST00000549537 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
TMEM116-208ENST00000549537 NUP160Q12769 1436 aa11.66□□□□□ -0.54
TMEM116-208ENST00000549537 CEP170Q5SW79 1584 aa11.65□□□□□ -0.54
TMEM116-208ENST00000549537 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
TMEM116-208ENST00000549537 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
TMEM116-208ENST00000549537 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-208ENST00000549537 IGF1RP08069 1367 aa11.57□□□□□ -0.56
TMEM116-208ENST00000549537 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
TMEM116-208ENST00000549537 CUL7Q14999 1698 aa11.55□□□□□ -0.56
TMEM116-208ENST00000549537 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
TMEM116-208ENST00000549537 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-208ENST00000549537 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
TMEM116-208ENST00000549537 PRG4Q92954 1404 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-208ENST00000549537 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
TMEM116-208ENST00000549537 KIAA0586Q9BVV6 1533 aa11.48□□□□□ -0.57
TMEM116-208ENST00000549537 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
TMEM116-208ENST00000549537 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
TMEM116-208ENST00000549537 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.58
TMEM116-208ENST00000549537 PROM2Q8N271 834 aa11.45□□□□□ -0.58
TMEM116-208ENST00000549537 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
TMEM116-208ENST00000549537 IQGAP2Q13576 1575 aa11.39□□□□□ -0.59
TMEM116-208ENST00000549537 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
TMEM116-208ENST00000549537 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
TMEM116-208ENST00000549537 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms