RNA–Protein interactions for RNA: ENST00000547444.1

SLC25A3-205, Transcript of solute carrier family 25 member 3, humanhuman

TSL 1 (best)

Gene SLC25A3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-205ENST00000547444 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
SLC25A3-205ENST00000547444 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
SLC25A3-205ENST00000547444 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
SLC25A3-205ENST00000547444 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
SLC25A3-205ENST00000547444 NESP48681 1621 aa15.28■□□□□ 0.04
SLC25A3-205ENST00000547444 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
SLC25A3-205ENST00000547444 CD44P16070 742 aaKnown RBP15.27■□□□□ 0.04
SLC25A3-205ENST00000547444 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
SLC25A3-205ENST00000547444 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
SLC25A3-205ENST00000547444 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
SLC25A3-205ENST00000547444 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
SLC25A3-205ENST00000547444 FARP1Q9Y4F1 1045 aaPredicted RBP15.19■□□□□ 0.02
SLC25A3-205ENST00000547444 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
SLC25A3-205ENST00000547444 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
SLC25A3-205ENST00000547444 CFTRP13569 1480 aa15.16■□□□□ 0.02
SLC25A3-205ENST00000547444 THOC2Q8NI27 1593 aaKnown RBP15.15■□□□□ 0.02
SLC25A3-205ENST00000547444 PLSCR2Q9NRY7 297 aa15.14■□□□□ 0.01
SLC25A3-205ENST00000547444 CLCN6P51797 869 aa15.13■□□□□ 0.01
SLC25A3-205ENST00000547444 CUX2O14529 1486 aa15.12■□□□□ 0.01
SLC25A3-205ENST00000547444 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
SLC25A3-205ENST00000547444 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
SLC25A3-205ENST00000547444 CEP164Q9UPV0 1460 aa15.07■□□□□ 0
SLC25A3-205ENST00000547444 SUPT5HO00267 1087 aaKnown RBP15.04■□□□□ -0
SLC25A3-205ENST00000547444 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
SLC25A3-205ENST00000547444 WDR62O43379 1518 aa15.02□□□□□ -0.01
SLC25A3-205ENST00000547444 ZNF579Q8NAF0 562 aaKnown RBP14.97□□□□□ -0.01
SLC25A3-205ENST00000547444 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
SLC25A3-205ENST00000547444 URB2Q14146 1524 aaKnown RBP14.91□□□□□ -0.02
SLC25A3-205ENST00000547444 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
SLC25A3-205ENST00000547444 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
SLC25A3-205ENST00000547444 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
SLC25A3-205ENST00000547444 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
SLC25A3-205ENST00000547444 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
SLC25A3-205ENST00000547444 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
SLC25A3-205ENST00000547444 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
SLC25A3-205ENST00000547444 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
SLC25A3-205ENST00000547444 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
SLC25A3-205ENST00000547444 CUX1P39880 1505 aa14.73□□□□□ -0.05
SLC25A3-205ENST00000547444 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
SLC25A3-205ENST00000547444 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
SLC25A3-205ENST00000547444 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
SLC25A3-205ENST00000547444 POTEMA6NI47 508 aa14.71□□□□□ -0.05
SLC25A3-205ENST00000547444 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
SLC25A3-205ENST00000547444 PHF12Q96QT6 1004 aa14.7□□□□□ -0.06
SLC25A3-205ENST00000547444 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
SLC25A3-205ENST00000547444 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
SLC25A3-205ENST00000547444 TOP2BQ02880 1626 aa14.67□□□□□ -0.06
SLC25A3-205ENST00000547444 EIF4G3O43432 1585 aaKnown RBP14.67□□□□□ -0.06
SLC25A3-205ENST00000547444 POTEGQ6S5H5 508 aa14.65□□□□□ -0.06
SLC25A3-205ENST00000547444 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
SLC25A3-205ENST00000547444 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
SLC25A3-205ENST00000547444 SOGA1O94964 1423 aa14.62□□□□□ -0.07
SLC25A3-205ENST00000547444 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
SLC25A3-205ENST00000547444 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
SLC25A3-205ENST00000547444 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
SLC25A3-205ENST00000547444 PBRM1Q86U86 1689 aa14.58□□□□□ -0.08
SLC25A3-205ENST00000547444 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
SLC25A3-205ENST00000547444 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
SLC25A3-205ENST00000547444 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
SLC25A3-205ENST00000547444 CHD1O14646 1710 aa14.53□□□□□ -0.08
SLC25A3-205ENST00000547444 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.08
SLC25A3-205ENST00000547444 METRNQ9UJH8 293 aa14.52□□□□□ -0.09
SLC25A3-205ENST00000547444 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
SLC25A3-205ENST00000547444 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
SLC25A3-205ENST00000547444 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
SLC25A3-205ENST00000547444 ASTLQ6HA08 431 aaPredicted RBP14.48□□□□□ -0.09
SLC25A3-205ENST00000547444 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
SLC25A3-205ENST00000547444 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
SLC25A3-205ENST00000547444 MAGI1Q96QZ7 1491 aaPredicted RBP14.47□□□□□ -0.09
SLC25A3-205ENST00000547444 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
SLC25A3-205ENST00000547444 SLC39A7Q92504 469 aa14.47□□□□□ -0.09
SLC25A3-205ENST00000547444 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
SLC25A3-205ENST00000547444 PCDH10Q9P2E7 1040 aa14.47□□□□□ -0.09
SLC25A3-205ENST00000547444 C7P10643 843 aa14.46□□□□□ -0.09
SLC25A3-205ENST00000547444 ATMINO43313 823 aaPredicted RBP14.45□□□□□ -0.1
SLC25A3-205ENST00000547444 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
SLC25A3-205ENST00000547444 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
SLC25A3-205ENST00000547444 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
SLC25A3-205ENST00000547444 MAMSTRQ6ZN01 415 aa14.42□□□□□ -0.1
SLC25A3-205ENST00000547444 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
SLC25A3-205ENST00000547444 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
SLC25A3-205ENST00000547444 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
SLC25A3-205ENST00000547444 CUL7Q14999 1698 aa14.34□□□□□ -0.11
SLC25A3-205ENST00000547444 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
SLC25A3-205ENST00000547444 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
SLC25A3-205ENST00000547444 SCUBE2Q9NQ36 999 aa14.32□□□□□ -0.12
SLC25A3-205ENST00000547444 LCE2DQ5TA82 110 aaPredicted RBP14.31□□□□□ -0.12
SLC25A3-205ENST00000547444 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
SLC25A3-205ENST00000547444 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
SLC25A3-205ENST00000547444 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
SLC25A3-205ENST00000547444 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
SLC25A3-205ENST00000547444 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
SLC25A3-205ENST00000547444 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
SLC25A3-205ENST00000547444 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
SLC25A3-205ENST00000547444 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
SLC25A3-205ENST00000547444 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
SLC25A3-205ENST00000547444 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
SLC25A3-205ENST00000547444 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
SLC25A3-205ENST00000547444 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
SLC25A3-205ENST00000547444 NUP160Q12769 1436 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms