RNA–Protein interactions for RNA: ENST00000546839.5

ERGIC2-203, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-203ENST00000546839 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
ERGIC2-203ENST00000546839 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
ERGIC2-203ENST00000546839 SNAPC4Q5SXM2 1469 aa20.15■□□□□ 0.82
ERGIC2-203ENST00000546839 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
ERGIC2-203ENST00000546839 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
ERGIC2-203ENST00000546839 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
ERGIC2-203ENST00000546839 CHD1O14646 1710 aa20.04■□□□□ 0.8
ERGIC2-203ENST00000546839 IGF1RP08069 1367 aa20.03■□□□□ 0.8
ERGIC2-203ENST00000546839 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
ERGIC2-203ENST00000546839 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
ERGIC2-203ENST00000546839 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
ERGIC2-203ENST00000546839 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
ERGIC2-203ENST00000546839 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
ERGIC2-203ENST00000546839 MYCNP04198 464 aaPredicted RBP19.94■□□□□ 0.78
ERGIC2-203ENST00000546839 U3KPZ7 1027 aaPredicted RBP19.94■□□□□ 0.78
ERGIC2-203ENST00000546839 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
ERGIC2-203ENST00000546839 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
ERGIC2-203ENST00000546839 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
ERGIC2-203ENST00000546839 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
ERGIC2-203ENST00000546839 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
ERGIC2-203ENST00000546839 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
ERGIC2-203ENST00000546839 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
ERGIC2-203ENST00000546839 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
ERGIC2-203ENST00000546839 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
ERGIC2-203ENST00000546839 NUP160Q12769 1436 aa19.87■□□□□ 0.77
ERGIC2-203ENST00000546839 CARMIL1Q5VZK9 1371 aa19.85■□□□□ 0.77
ERGIC2-203ENST00000546839 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
ERGIC2-203ENST00000546839 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
ERGIC2-203ENST00000546839 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
ERGIC2-203ENST00000546839 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
ERGIC2-203ENST00000546839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
ERGIC2-203ENST00000546839 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
ERGIC2-203ENST00000546839 KIAA0586Q9BVV6 1533 aa19.7■□□□□ 0.74
ERGIC2-203ENST00000546839 CUL7Q14999 1698 aa19.69■□□□□ 0.74
ERGIC2-203ENST00000546839 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
ERGIC2-203ENST00000546839 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
ERGIC2-203ENST00000546839 C1QBPQ07021 282 aaKnown RBP19.67■□□□□ 0.74
ERGIC2-203ENST00000546839 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
ERGIC2-203ENST00000546839 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
ERGIC2-203ENST00000546839 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
ERGIC2-203ENST00000546839 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
ERGIC2-203ENST00000546839 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
ERGIC2-203ENST00000546839 APLP2Q06481 763 aa19.55■□□□□ 0.72
ERGIC2-203ENST00000546839 ATXN8OSP0DMR3 200 aa19.54■□□□□ 0.72
ERGIC2-203ENST00000546839 EEA1Q15075 1411 aa19.52■□□□□ 0.72
ERGIC2-203ENST00000546839 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
ERGIC2-203ENST00000546839 PTPRGP23470 1445 aa19.47■□□□□ 0.71
ERGIC2-203ENST00000546839 IQGAP2Q13576 1575 aa19.45■□□□□ 0.7
ERGIC2-203ENST00000546839 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
ERGIC2-203ENST00000546839 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
ERGIC2-203ENST00000546839 DISP1Q96F81 1524 aa19.42■□□□□ 0.7
ERGIC2-203ENST00000546839 TTBK1Q5TCY1 1321 aaPredicted RBP19.42■□□□□ 0.7
ERGIC2-203ENST00000546839 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
ERGIC2-203ENST00000546839 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
ERGIC2-203ENST00000546839 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
ERGIC2-203ENST00000546839 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
ERGIC2-203ENST00000546839 CACNB1Q02641 598 aaPredicted RBP19.34■□□□□ 0.69
ERGIC2-203ENST00000546839 CAPN15O75808 1086 aa19.32■□□□□ 0.68
ERGIC2-203ENST00000546839 P3H3Q8IVL6 736 aa19.32■□□□□ 0.68
ERGIC2-203ENST00000546839 UACAQ9BZF9 1416 aa19.29■□□□□ 0.68
ERGIC2-203ENST00000546839 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
ERGIC2-203ENST00000546839 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
ERGIC2-203ENST00000546839 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
ERGIC2-203ENST00000546839 CTTNBP2Q8WZ74 1663 aa19.27■□□□□ 0.67
ERGIC2-203ENST00000546839 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
ERGIC2-203ENST00000546839 UHRF1BP1LA0JNW5 1464 aa19.26■□□□□ 0.67
ERGIC2-203ENST00000546839 KIAA0556O60303 1618 aa19.25■□□□□ 0.67
ERGIC2-203ENST00000546839 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
ERGIC2-203ENST00000546839 KIF21BO75037 1637 aa19.24■□□□□ 0.67
ERGIC2-203ENST00000546839 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
ERGIC2-203ENST00000546839 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
ERGIC2-203ENST00000546839 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
ERGIC2-203ENST00000546839 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
ERGIC2-203ENST00000546839 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
ERGIC2-203ENST00000546839 KDM5BQ9UGL1 1544 aa19.16■□□□□ 0.66
ERGIC2-203ENST00000546839 ASXL2Q76L83 1435 aa19.13■□□□□ 0.65
ERGIC2-203ENST00000546839 ABCA8O94911 1581 aa19.12■□□□□ 0.65
ERGIC2-203ENST00000546839 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
ERGIC2-203ENST00000546839 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.65
ERGIC2-203ENST00000546839 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
ERGIC2-203ENST00000546839 ATP10BO94823 1461 aa19.07■□□□□ 0.64
ERGIC2-203ENST00000546839 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
ERGIC2-203ENST00000546839 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
ERGIC2-203ENST00000546839 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
ERGIC2-203ENST00000546839 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.63
ERGIC2-203ENST00000546839 ZCCHC11Q5TAX3 1644 aaKnown RBP19.01■□□□□ 0.63
ERGIC2-203ENST00000546839 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
ERGIC2-203ENST00000546839 EFCAB5A4FU69 1503 aa19■□□□□ 0.63
ERGIC2-203ENST00000546839 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
ERGIC2-203ENST00000546839 GLI2P10070 1586 aa18.97■□□□□ 0.63
ERGIC2-203ENST00000546839 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
ERGIC2-203ENST00000546839 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
ERGIC2-203ENST00000546839 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
ERGIC2-203ENST00000546839 DSG3P32926 999 aa18.95■□□□□ 0.62
ERGIC2-203ENST00000546839 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
ERGIC2-203ENST00000546839 ABCB7O75027 752 aa18.93■□□□□ 0.62
ERGIC2-203ENST00000546839 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
ERGIC2-203ENST00000546839 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
ERGIC2-203ENST00000546839 POLA2Q14181 598 aa18.92■□□□□ 0.62
ERGIC2-203ENST00000546839 CLIP1P30622 1438 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms