RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
NECAP1-208ENST00000545807 KIF21AQ7Z4S6 1674 aa9.78□□□□□ -0.84
NECAP1-208ENST00000545807 CARMIL1Q5VZK9 1371 aa9.78□□□□□ -0.84
NECAP1-208ENST00000545807 ERICH6BQ5W0A0 696 aa9.78□□□□□ -0.84
NECAP1-208ENST00000545807 PRDM2Q13029 1718 aa9.77□□□□□ -0.85
NECAP1-208ENST00000545807 FBLN2P98095 1184 aa9.77□□□□□ -0.85
NECAP1-208ENST00000545807 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
NECAP1-208ENST00000545807 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
NECAP1-208ENST00000545807 PKNOX2Q96KN3 472 aa9.75□□□□□ -0.85
NECAP1-208ENST00000545807 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-208ENST00000545807 AQRO60306 1485 aaKnown RBP eCLIP9.73□□□□□ -0.856e-7■■■■■ 30.6
NECAP1-208ENST00000545807 PRXQ9BXM0 1461 aa9.73□□□□□ -0.85
NECAP1-208ENST00000545807 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
NECAP1-208ENST00000545807 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
NECAP1-208ENST00000545807 KIF21BO75037 1637 aa9.72□□□□□ -0.85
NECAP1-208ENST00000545807 ARID3CA6NKF2 412 aa9.71□□□□□ -0.85
NECAP1-208ENST00000545807 HNRNPUL2Q1KMD3 747 aaKnown RBP9.69□□□□□ -0.86
NECAP1-208ENST00000545807 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
NECAP1-208ENST00000545807 SUPT16HQ9Y5B9 1047 aaKnown RBP9.68□□□□□ -0.86
NECAP1-208ENST00000545807 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
NECAP1-208ENST00000545807 ZNF608Q9ULD9 1512 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-208ENST00000545807 ABCA10Q8WWZ4 1543 aa9.67□□□□□ -0.86
NECAP1-208ENST00000545807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-208ENST00000545807 ITGAEP38570 1179 aa9.66□□□□□ -0.86
NECAP1-208ENST00000545807 KANK4Q5T7N3 995 aaPredicted RBP9.66□□□□□ -0.86
NECAP1-208ENST00000545807 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
NECAP1-208ENST00000545807 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
NECAP1-208ENST00000545807 ERICH3Q5RHP9 1530 aa9.63□□□□□ -0.87
NECAP1-208ENST00000545807 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
NECAP1-208ENST00000545807 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-208ENST00000545807 FHOD3Q2V2M9 1422 aa9.61□□□□□ -0.87
NECAP1-208ENST00000545807 ARHGAP35Q9NRY4 1499 aa9.61□□□□□ -0.87
NECAP1-208ENST00000545807 CCER1Q8TC90 406 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-208ENST00000545807 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
NECAP1-208ENST00000545807 DEKP35659 375 aaKnown RBP9.57□□□□□ -0.88
NECAP1-208ENST00000545807 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
NECAP1-208ENST00000545807 SNAPC4Q5SXM2 1469 aa9.54□□□□□ -0.88
NECAP1-208ENST00000545807 MSH5O43196 834 aa9.54□□□□□ -0.88
NECAP1-208ENST00000545807 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
NECAP1-208ENST00000545807 WDR62O43379 1518 aa9.54□□□□□ -0.88
NECAP1-208ENST00000545807 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
NECAP1-208ENST00000545807 FAM50AQ14320 339 aaKnown RBP9.53□□□□□ -0.88
NECAP1-208ENST00000545807 YTHDC1Q96MU7 727 aaKnown RBP9.53□□□□□ -0.88
NECAP1-208ENST00000545807 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
NECAP1-208ENST00000545807 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
NECAP1-208ENST00000545807 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
NECAP1-208ENST00000545807 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
NECAP1-208ENST00000545807 CUL7Q14999 1698 aa9.5□□□□□ -0.89
NECAP1-208ENST00000545807 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
NECAP1-208ENST00000545807 PBRM1Q86U86 1689 aa9.49□□□□□ -0.89
NECAP1-208ENST00000545807 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
NECAP1-208ENST00000545807 NEFLP07196 543 aa9.47□□□□□ -0.89
NECAP1-208ENST00000545807 JPH4Q96JJ6 628 aa9.46□□□□□ -0.9
NECAP1-208ENST00000545807 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-208ENST00000545807 ADAMTS12P58397 1594 aa9.45□□□□□ -0.9
NECAP1-208ENST00000545807 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-208ENST00000545807 PCF11O94913 1555 aaKnown RBP9.44□□□□□ -0.9
NECAP1-208ENST00000545807 MTUS2Q5JR59 1369 aa9.44□□□□□ -0.9
NECAP1-208ENST00000545807 CTTNBP2Q8WZ74 1663 aa9.44□□□□□ -0.9
NECAP1-208ENST00000545807 GRIN2AQ12879 1464 aa9.44□□□□□ -0.9
NECAP1-208ENST00000545807 MIER1Q8N108 512 aa9.43□□□□□ -0.9
NECAP1-208ENST00000545807 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
NECAP1-208ENST00000545807 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
NECAP1-208ENST00000545807 PHLDB1Q86UU1 1377 aa9.41□□□□□ -0.9
NECAP1-208ENST00000545807 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
NECAP1-208ENST00000545807 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.91
NECAP1-208ENST00000545807 NCBP3Q53F19 620 aaKnown RBP9.39□□□□□ -0.91
NECAP1-208ENST00000545807 CCNB3Q8WWL7 1395 aa9.39□□□□□ -0.91
NECAP1-208ENST00000545807 LRRC9Q6ZRR7 1453 aa9.39□□□□□ -0.91
NECAP1-208ENST00000545807 PHF23Q9BUL5 403 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-208ENST00000545807 CASKIN1Q8WXD9 1431 aa9.39□□□□□ -0.91
NECAP1-208ENST00000545807 MAGI1Q96QZ7 1491 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-208ENST00000545807 TIAM1Q13009 1591 aa9.38□□□□□ -0.91
NECAP1-208ENST00000545807 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
NECAP1-208ENST00000545807 ZNF777Q9ULD5 760 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-208ENST00000545807 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
NECAP1-208ENST00000545807 PDE4CQ08493 712 aa9.37□□□□□ -0.91
NECAP1-208ENST00000545807 CDK13Q14004 1512 aaKnown RBP9.37□□□□□ -0.91
NECAP1-208ENST00000545807 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
NECAP1-208ENST00000545807 CEP170Q5SW79 1584 aa9.36□□□□□ -0.91
NECAP1-208ENST00000545807 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
NECAP1-208ENST00000545807 FYCO1Q9BQS8 1478 aa9.35□□□□□ -0.91
NECAP1-208ENST00000545807 FGD1P98174 961 aa9.35□□□□□ -0.91
NECAP1-208ENST00000545807 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
NECAP1-208ENST00000545807 ZMYND15Q9H091 742 aa9.34□□□□□ -0.91
NECAP1-208ENST00000545807 PRG4Q92954 1404 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-208ENST00000545807 DISP1Q96F81 1524 aa9.34□□□□□ -0.91
NECAP1-208ENST00000545807 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
NECAP1-208ENST00000545807 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
NECAP1-208ENST00000545807 RRP7BPQ9NSQ0 103 aa9.33□□□□□ -0.92
NECAP1-208ENST00000545807 CARMIL2Q6F5E8 1435 aa9.32□□□□□ -0.92
NECAP1-208ENST00000545807 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-208ENST00000545807 GLIPR1L2Q4G1C9 344 aa9.31□□□□□ -0.92
NECAP1-208ENST00000545807 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-208ENST00000545807 EPRSP07814 1512 aaKnown RBP9.3□□□□□ -0.92
NECAP1-208ENST00000545807 AAMPQ13685 434 aa9.3□□□□□ -0.92
NECAP1-208ENST00000545807 ARXQ96QS3 562 aa9.3□□□□□ -0.92
NECAP1-208ENST00000545807 PTPRGP23470 1445 aa9.3□□□□□ -0.92
NECAP1-208ENST00000545807 NUP160Q12769 1436 aa9.3□□□□□ -0.92
NECAP1-208ENST00000545807 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms