RNA–Protein interactions for RNA: ENST00000545479.5

NPIPA1-207, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-207ENST00000545479 CADPSQ9ULU8 1353 aa12.24□□□□□ -0.45
NPIPA1-207ENST00000545479 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
NPIPA1-207ENST00000545479 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
NPIPA1-207ENST00000545479 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
NPIPA1-207ENST00000545479 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
NPIPA1-207ENST00000545479 WDR62O43379 1518 aa12.16□□□□□ -0.46
NPIPA1-207ENST00000545479 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
NPIPA1-207ENST00000545479 CFTRP13569 1480 aa12.11□□□□□ -0.47
NPIPA1-207ENST00000545479 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
NPIPA1-207ENST00000545479 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
NPIPA1-207ENST00000545479 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
NPIPA1-207ENST00000545479 EVX2Q03828 476 aa12.06□□□□□ -0.48
NPIPA1-207ENST00000545479 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
NPIPA1-207ENST00000545479 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
NPIPA1-207ENST00000545479 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
NPIPA1-207ENST00000545479 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
NPIPA1-207ENST00000545479 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
NPIPA1-207ENST00000545479 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
NPIPA1-207ENST00000545479 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
NPIPA1-207ENST00000545479 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
NPIPA1-207ENST00000545479 TOPBP1Q92547 1522 aa11.88□□□□□ -0.51
NPIPA1-207ENST00000545479 PRDM2Q13029 1718 aa11.87□□□□□ -0.51
NPIPA1-207ENST00000545479 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
NPIPA1-207ENST00000545479 GABBR2O75899 941 aa11.85□□□□□ -0.51
NPIPA1-207ENST00000545479 DNMBPQ6XZF7 1577 aa11.82□□□□□ -0.52
NPIPA1-207ENST00000545479 EIF4G3O43432 1585 aaKnown RBP11.8□□□□□ -0.52
NPIPA1-207ENST00000545479 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
NPIPA1-207ENST00000545479 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
NPIPA1-207ENST00000545479 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
NPIPA1-207ENST00000545479 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
NPIPA1-207ENST00000545479 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
NPIPA1-207ENST00000545479 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
NPIPA1-207ENST00000545479 ABCC8Q09428 1581 aa11.76□□□□□ -0.53
NPIPA1-207ENST00000545479 RIMBP3CA6NJZ7 1639 aa11.76□□□□□ -0.53
NPIPA1-207ENST00000545479 RIMBP3BA6NNM3 1639 aa11.76□□□□□ -0.53
NPIPA1-207ENST00000545479 RIMBP3Q9UFD9 1639 aa11.76□□□□□ -0.53
NPIPA1-207ENST00000545479 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
NPIPA1-207ENST00000545479 RAD54L2Q9Y4B4 1467 aa11.75□□□□□ -0.53
NPIPA1-207ENST00000545479 ARHGEF11O15085 1522 aa11.75□□□□□ -0.53
NPIPA1-207ENST00000545479 CLCN6P51797 869 aa11.74□□□□□ -0.53
NPIPA1-207ENST00000545479 CUX1P39880 1505 aa11.7□□□□□ -0.54
NPIPA1-207ENST00000545479 TDRD9Q8NDG6 1382 aaKnown RBP11.69□□□□□ -0.54
NPIPA1-207ENST00000545479 FGD5Q6ZNL6 1462 aa11.69□□□□□ -0.54
NPIPA1-207ENST00000545479 SOGA1O94964 1423 aa11.69□□□□□ -0.54
NPIPA1-207ENST00000545479 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
NPIPA1-207ENST00000545479 CHD1O14646 1710 aa11.67□□□□□ -0.54
NPIPA1-207ENST00000545479 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
NPIPA1-207ENST00000545479 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
NPIPA1-207ENST00000545479 LHX8Q68G74 356 aa11.64□□□□□ -0.55
NPIPA1-207ENST00000545479 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
NPIPA1-207ENST00000545479 CYB5RLQ6IPT4 315 aa11.62□□□□□ -0.55
NPIPA1-207ENST00000545479 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
NPIPA1-207ENST00000545479 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
NPIPA1-207ENST00000545479 WDR97A6NE52 1622 aa11.59□□□□□ -0.55
NPIPA1-207ENST00000545479 GRIN2BQ13224 1484 aa11.58□□□□□ -0.56
NPIPA1-207ENST00000545479 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
NPIPA1-207ENST00000545479 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
NPIPA1-207ENST00000545479 SUPT5HO00267 1087 aaKnown RBP11.57□□□□□ -0.56
NPIPA1-207ENST00000545479 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
NPIPA1-207ENST00000545479 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
NPIPA1-207ENST00000545479 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
NPIPA1-207ENST00000545479 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
NPIPA1-207ENST00000545479 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
NPIPA1-207ENST00000545479 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
NPIPA1-207ENST00000545479 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
NPIPA1-207ENST00000545479 ABCA5Q8WWZ7 1642 aa11.53□□□□□ -0.56
NPIPA1-207ENST00000545479 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
NPIPA1-207ENST00000545479 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
NPIPA1-207ENST00000545479 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
NPIPA1-207ENST00000545479 WRNQ14191 1432 aaPredicted RBP eCLIP11.47□□□□□ -0.57
NPIPA1-207ENST00000545479 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
NPIPA1-207ENST00000545479 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
NPIPA1-207ENST00000545479 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
NPIPA1-207ENST00000545479 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
NPIPA1-207ENST00000545479 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
NPIPA1-207ENST00000545479 CEP170Q5SW79 1584 aa11.44□□□□□ -0.58
NPIPA1-207ENST00000545479 NUP160Q12769 1436 aa11.43□□□□□ -0.58
NPIPA1-207ENST00000545479 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
NPIPA1-207ENST00000545479 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
NPIPA1-207ENST00000545479 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
NPIPA1-207ENST00000545479 ERICH3Q5RHP9 1530 aa11.37□□□□□ -0.59
NPIPA1-207ENST00000545479 PROM2Q8N271 834 aa11.36□□□□□ -0.59
NPIPA1-207ENST00000545479 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
NPIPA1-207ENST00000545479 SHROOM2Q13796 1616 aa11.35□□□□□ -0.59
NPIPA1-207ENST00000545479 PRG4Q92954 1404 aaPredicted RBP11.3□□□□□ -0.6
NPIPA1-207ENST00000545479 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
NPIPA1-207ENST00000545479 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
NPIPA1-207ENST00000545479 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
NPIPA1-207ENST00000545479 IGF1RP08069 1367 aa11.26□□□□□ -0.61
NPIPA1-207ENST00000545479 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
NPIPA1-207ENST00000545479 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
NPIPA1-207ENST00000545479 KIF27Q86VH2 1401 aa11.21□□□□□ -0.61
NPIPA1-207ENST00000545479 KIAA0586Q9BVV6 1533 aa11.2□□□□□ -0.62
NPIPA1-207ENST00000545479 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
NPIPA1-207ENST00000545479 ADCY10Q96PN6 1610 aa11.19□□□□□ -0.62
NPIPA1-207ENST00000545479 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
NPIPA1-207ENST00000545479 MIER1Q8N108 512 aa11.18□□□□□ -0.62
NPIPA1-207ENST00000545479 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
NPIPA1-207ENST00000545479 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
NPIPA1-207ENST00000545479 CUL7Q14999 1698 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms