RNA–Protein interactions for RNA: ENST00000545479.5

NPIPA1-207, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-207ENST00000545479 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
NPIPA1-207ENST00000545479 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
NPIPA1-207ENST00000545479 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
NPIPA1-207ENST00000545479 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
NPIPA1-207ENST00000545479 FOXD1Q16676 465 aa18.27■□□□□ 0.52
NPIPA1-207ENST00000545479 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
NPIPA1-207ENST00000545479 MSH5O43196 834 aa17.24■□□□□ 0.35
NPIPA1-207ENST00000545479 PIAS4Q8N2W9 510 aaPredicted RBP17.07■□□□□ 0.32
NPIPA1-207ENST00000545479 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
NPIPA1-207ENST00000545479 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
NPIPA1-207ENST00000545479 ADRA2BP18089 450 aa16.89■□□□□ 0.29
NPIPA1-207ENST00000545479 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
NPIPA1-207ENST00000545479 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
NPIPA1-207ENST00000545479 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
NPIPA1-207ENST00000545479 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
NPIPA1-207ENST00000545479 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
NPIPA1-207ENST00000545479 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
NPIPA1-207ENST00000545479 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
NPIPA1-207ENST00000545479 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
NPIPA1-207ENST00000545479 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
NPIPA1-207ENST00000545479 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
NPIPA1-207ENST00000545479 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
NPIPA1-207ENST00000545479 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
NPIPA1-207ENST00000545479 ABCC9O60706 1549 aa14.51□□□□□ -0.09
NPIPA1-207ENST00000545479 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
NPIPA1-207ENST00000545479 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
NPIPA1-207ENST00000545479 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
NPIPA1-207ENST00000545479 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
NPIPA1-207ENST00000545479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
NPIPA1-207ENST00000545479 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
NPIPA1-207ENST00000545479 KCNA4P22459 653 aa13.85□□□□□ -0.19
NPIPA1-207ENST00000545479 CAPN15O75808 1086 aa13.74□□□□□ -0.21
NPIPA1-207ENST00000545479 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
NPIPA1-207ENST00000545479 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
NPIPA1-207ENST00000545479 DSG3P32926 999 aa13.66□□□□□ -0.22
NPIPA1-207ENST00000545479 NACADO15069 1562 aa13.64□□□□□ -0.23
NPIPA1-207ENST00000545479 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
NPIPA1-207ENST00000545479 APLP2Q06481 763 aa13.61□□□□□ -0.23
NPIPA1-207ENST00000545479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
NPIPA1-207ENST00000545479 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
NPIPA1-207ENST00000545479 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
NPIPA1-207ENST00000545479 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
NPIPA1-207ENST00000545479 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
NPIPA1-207ENST00000545479 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
NPIPA1-207ENST00000545479 MYO15BQ96JP2 1530 aa13.45□□□□□ -0.26
NPIPA1-207ENST00000545479 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
NPIPA1-207ENST00000545479 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
NPIPA1-207ENST00000545479 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
NPIPA1-207ENST00000545479 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
NPIPA1-207ENST00000545479 ABCB7O75027 752 aa13.35□□□□□ -0.27
NPIPA1-207ENST00000545479 POTEHQ6S545 545 aa13.3□□□□□ -0.28
NPIPA1-207ENST00000545479 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
NPIPA1-207ENST00000545479 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
NPIPA1-207ENST00000545479 SCRIBQ14160 1630 aa13.2□□□□□ -0.3
NPIPA1-207ENST00000545479 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
NPIPA1-207ENST00000545479 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
NPIPA1-207ENST00000545479 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
NPIPA1-207ENST00000545479 CC2D2AQ9P2K1 1620 aa13.08□□□□□ -0.32
NPIPA1-207ENST00000545479 POLA2Q14181 598 aa13.07□□□□□ -0.32
NPIPA1-207ENST00000545479 CECR2Q9BXF3 1484 aa13.06□□□□□ -0.32
NPIPA1-207ENST00000545479 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
NPIPA1-207ENST00000545479 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
NPIPA1-207ENST00000545479 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
NPIPA1-207ENST00000545479 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
NPIPA1-207ENST00000545479 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
NPIPA1-207ENST00000545479 AKT1S1Q96B36 256 aa12.76□□□□□ -0.37
NPIPA1-207ENST00000545479 ZBTB22O15209 634 aa12.69□□□□□ -0.38
NPIPA1-207ENST00000545479 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
NPIPA1-207ENST00000545479 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
NPIPA1-207ENST00000545479 NCAPD3P42695 1498 aa12.63□□□□□ -0.39
NPIPA1-207ENST00000545479 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
NPIPA1-207ENST00000545479 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
NPIPA1-207ENST00000545479 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
NPIPA1-207ENST00000545479 HMGXB3Q12766 1538 aa12.52□□□□□ -0.4
NPIPA1-207ENST00000545479 SMARCA2P51531 1590 aa12.52□□□□□ -0.41
NPIPA1-207ENST00000545479 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
NPIPA1-207ENST00000545479 ERCC6Q03468 1493 aa12.49□□□□□ -0.41
NPIPA1-207ENST00000545479 FBLN2P98095 1184 aa12.49□□□□□ -0.41
NPIPA1-207ENST00000545479 NESP48681 1621 aa12.48□□□□□ -0.41
NPIPA1-207ENST00000545479 CUX2O14529 1486 aa12.48□□□□□ -0.41
NPIPA1-207ENST00000545479 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
NPIPA1-207ENST00000545479 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
NPIPA1-207ENST00000545479 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
NPIPA1-207ENST00000545479 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.42
NPIPA1-207ENST00000545479 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
NPIPA1-207ENST00000545479 PEG3Q9GZU2 1588 aa12.44□□□□□ -0.42
NPIPA1-207ENST00000545479 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
NPIPA1-207ENST00000545479 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
NPIPA1-207ENST00000545479 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
NPIPA1-207ENST00000545479 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
NPIPA1-207ENST00000545479 FXR2P51116 673 aaKnown RBP eCLIP12.39□□□□□ -0.43
NPIPA1-207ENST00000545479 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
NPIPA1-207ENST00000545479 HAX1O00165 279 aa12.32□□□□□ -0.44
NPIPA1-207ENST00000545479 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
NPIPA1-207ENST00000545479 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
NPIPA1-207ENST00000545479 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
NPIPA1-207ENST00000545479 WIZO95785 1651 aa12.26□□□□□ -0.45
NPIPA1-207ENST00000545479 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
NPIPA1-207ENST00000545479 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
NPIPA1-207ENST00000545479 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms