RNA–Protein interactions for RNA: ENST00000544693.5

NPIPB4-220, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-220ENST00000544693 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
NPIPB4-220ENST00000544693 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
NPIPB4-220ENST00000544693 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
NPIPB4-220ENST00000544693 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
NPIPB4-220ENST00000544693 KIF21AQ7Z4S6 1674 aa10.88□□□□□ -0.67
NPIPB4-220ENST00000544693 CADPSQ9ULU8 1353 aa10.87□□□□□ -0.67
NPIPB4-220ENST00000544693 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
NPIPB4-220ENST00000544693 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
NPIPB4-220ENST00000544693 NESP48681 1621 aa10.84□□□□□ -0.67
NPIPB4-220ENST00000544693 CUX2O14529 1486 aa10.82□□□□□ -0.68
NPIPB4-220ENST00000544693 CFTRP13569 1480 aa10.82□□□□□ -0.68
NPIPB4-220ENST00000544693 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
NPIPB4-220ENST00000544693 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
NPIPB4-220ENST00000544693 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
NPIPB4-220ENST00000544693 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
NPIPB4-220ENST00000544693 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
NPIPB4-220ENST00000544693 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
NPIPB4-220ENST00000544693 WDR62O43379 1518 aa10.73□□□□□ -0.69
NPIPB4-220ENST00000544693 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
NPIPB4-220ENST00000544693 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
NPIPB4-220ENST00000544693 ABCC8Q09428 1581 aa10.72□□□□□ -0.69
NPIPB4-220ENST00000544693 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
NPIPB4-220ENST00000544693 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
NPIPB4-220ENST00000544693 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-220ENST00000544693 CLCN6P51797 869 aa10.62□□□□□ -0.71
NPIPB4-220ENST00000544693 URB2Q14146 1524 aaKnown RBP10.6□□□□□ -0.71
NPIPB4-220ENST00000544693 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
NPIPB4-220ENST00000544693 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
NPIPB4-220ENST00000544693 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
NPIPB4-220ENST00000544693 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
NPIPB4-220ENST00000544693 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
NPIPB4-220ENST00000544693 BIVM-ERCC5R4GMW8 1640 aa10.53□□□□□ -0.72
NPIPB4-220ENST00000544693 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
NPIPB4-220ENST00000544693 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
NPIPB4-220ENST00000544693 TARBP1Q13395 1621 aaKnown RBP10.51□□□□□ -0.73
NPIPB4-220ENST00000544693 CUX1P39880 1505 aa10.49□□□□□ -0.73
NPIPB4-220ENST00000544693 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
NPIPB4-220ENST00000544693 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
NPIPB4-220ENST00000544693 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
NPIPB4-220ENST00000544693 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
NPIPB4-220ENST00000544693 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
NPIPB4-220ENST00000544693 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
NPIPB4-220ENST00000544693 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
NPIPB4-220ENST00000544693 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
NPIPB4-220ENST00000544693 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
NPIPB4-220ENST00000544693 SOGA1O94964 1423 aa10.43□□□□□ -0.74
NPIPB4-220ENST00000544693 CREBZFQ9NS37 354 aa10.43□□□□□ -0.74
NPIPB4-220ENST00000544693 SYNJ1O43426 1573 aa10.43□□□□□ -0.74
NPIPB4-220ENST00000544693 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
NPIPB4-220ENST00000544693 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
NPIPB4-220ENST00000544693 CHD1O14646 1710 aa10.38□□□□□ -0.75
NPIPB4-220ENST00000544693 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
NPIPB4-220ENST00000544693 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
NPIPB4-220ENST00000544693 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
NPIPB4-220ENST00000544693 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
NPIPB4-220ENST00000544693 GAPVD1Q14C86 1478 aa10.36□□□□□ -0.75
NPIPB4-220ENST00000544693 POTEMA6NI47 508 aa10.34□□□□□ -0.75
NPIPB4-220ENST00000544693 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.759e-14■■■□□ 18.6
NPIPB4-220ENST00000544693 ERICH3Q5RHP9 1530 aa10.33□□□□□ -0.76
NPIPB4-220ENST00000544693 CUL7Q14999 1698 aa10.31□□□□□ -0.76
NPIPB4-220ENST00000544693 DNAJC5Q9H3Z4 198 aa10.31□□□□□ -0.76
NPIPB4-220ENST00000544693 SNAPC4Q5SXM2 1469 aa10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
NPIPB4-220ENST00000544693 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
NPIPB4-220ENST00000544693 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
NPIPB4-220ENST00000544693 ADAMTS12P58397 1594 aa10.28□□□□□ -0.76
NPIPB4-220ENST00000544693 KIF27Q86VH2 1401 aa10.28□□□□□ -0.76
NPIPB4-220ENST00000544693 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.77
NPIPB4-220ENST00000544693 CHMP7Q8WUX9 453 aaPredicted RBP10.24□□□□□ -0.77
NPIPB4-220ENST00000544693 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
NPIPB4-220ENST00000544693 POTEJP0CG39 1038 aa10.23□□□□□ -0.77
NPIPB4-220ENST00000544693 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
NPIPB4-220ENST00000544693 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
NPIPB4-220ENST00000544693 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.77
NPIPB4-220ENST00000544693 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
NPIPB4-220ENST00000544693 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
NPIPB4-220ENST00000544693 CLASP1Q7Z460 1538 aa10.2□□□□□ -0.78
NPIPB4-220ENST00000544693 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
NPIPB4-220ENST00000544693 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
NPIPB4-220ENST00000544693 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
NPIPB4-220ENST00000544693 EEA1Q15075 1411 aa10.16□□□□□ -0.78
NPIPB4-220ENST00000544693 ATMINO43313 823 aaPredicted RBP10.16□□□□□ -0.78
NPIPB4-220ENST00000544693 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
NPIPB4-220ENST00000544693 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.78
NPIPB4-220ENST00000544693 ARHGEF11O15085 1522 aa10.15□□□□□ -0.78
NPIPB4-220ENST00000544693 NUP160Q12769 1436 aa10.15□□□□□ -0.79
NPIPB4-220ENST00000544693 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
NPIPB4-220ENST00000544693 RUSC2Q8N2Y8 1516 aa10.14□□□□□ -0.79
NPIPB4-220ENST00000544693 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
NPIPB4-220ENST00000544693 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPIPB4-220ENST00000544693 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
NPIPB4-220ENST00000544693 C7P10643 843 aa10.12□□□□□ -0.79
NPIPB4-220ENST00000544693 IGF1RP08069 1367 aa10.12□□□□□ -0.79
NPIPB4-220ENST00000544693 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
NPIPB4-220ENST00000544693 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms